rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
34127,SRR31359854,SRX26733717,SRS23223868,SRP545360,PRJNA1186345,The pronephros/cloaca development difference between WT and gdf11 mutants at 24 hpf,PRJNA1186345,Other,To identify specific genes or signaling pathways or genes with altered expression in pronephric ducts and cloaca in the absence of Gdf11  we analyzed transcriptomic changes using RNA deep sequencing on WT and gdf11 mutant embryos in Tgcdh17 dsRed background at 24 hpf.,,,,,LJW KV FKDL210002409 1a,,strain:LJW KV FKDL210002409 1a|isolate:zebrafish|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|collection date:2024 02 18|geo loc name:China: Anhui Medical University  Hefei|sex:not applicable|tissue:zebrafish|BioSampleModel:Model organism or animal,,,,,,,,,zebrafish mRNA sequencing,LJW KV FKDL210002409 1a,LJW KV FKDL210002409 1a,RNA seq,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,ILLUMINA,Illumina HiSeq 1000,,SRP545360,,,LJW-KV_FKDL210002409-1a_1.clean.fq.gz LJW-KV_FKDL210002409-1a_2.clean.fq.gz,fastq fastq,8667883500.0,28892945.0,LJW KV FKDL210002409 1a 1.clean.fq.gz,0:150 1:150,A:2771307253;C:1399313804;G:1767761135;T:2729383521;N:117787,150,150,,,2771307253,1399313804,1767761135,2729383521,117787,SRX26733717,SRS23223868,SRA2015444,Anhui Medical University|Basical Medicine,Anhui Medical University,,,,,,,,,,,,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2024-11-15,Undetermined,Embryo,Undetermined,Embryo Imprecise
58533,SRR11355387,SRX7957249,SRS6343356,SRP253408,PRJNA613558,Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture,PRJNA613558,Other,As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease  the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation  adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study  combined with antibiotics bioaccumulated in ovary  we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish  and thus affect egg production and survival. Therefore  ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0  1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.,,,,C2 3,C2 3,,strain:AB|isolate:C2|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:female|tissue:ovary|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|replicate:biological replicate 3|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C2 320200327,C2 320200327,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP253408,,,C2_3_1.fq.gz C2_3_2.fq.gz,fastq fastq,6857650800.0,45717672.0,C2 3 1.fq.gz,0:150 1:150,A:1826466263;C:1599272942;G:1580689630;T:1851144875;N:77090,150,150,,,1826466263,1599272942,1580689630,1851144875,77090,SRX7957249,SRS6343356,SRA1056819,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93222,,0.02854,,0.75138,,0.50759,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-03-20,Undetermined,Adult,Gonad,Reproductive System
58534,SRR11355388,SRX7957248,SRS6343355,SRP253408,PRJNA613558,Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture,PRJNA613558,Other,As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease  the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation  adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study  combined with antibiotics bioaccumulated in ovary  we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish  and thus affect egg production and survival. Therefore  ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0  1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.,,,,C2 2,C2 2,,strain:AB|isolate:C2|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:female|tissue:ovary|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|replicate:biological replicate 2|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C2 220200326,C2 220200326,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP253408,,,C2_2_1.fq.gz C2_2_2.fq.gz,fastq fastq,6859954800.0,45733032.0,C2 2 1.fq.gz,0:150 1:150,A:1836618967;C:1591135182;G:1572318102;T:1859806048;N:76501,150,150,,,1836618967,1591135182,1572318102,1859806048,76501,SRX7957248,SRS6343355,SRA1056819,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93237,,0.03248,,0.74663,,0.5081,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-03-20,Undetermined,Adult,Gonad,Reproductive System
58535,SRR11355389,SRX7957247,SRS6343354,SRP253408,PRJNA613558,Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture,PRJNA613558,Other,As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease  the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation  adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study  combined with antibiotics bioaccumulated in ovary  we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish  and thus affect egg production and survival. Therefore  ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0  1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.,,,,C2 1,C2 1,,strain:AB|isolate:C2|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:female|tissue:ovary|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|replicate:biological replicate 1|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C2 120200325,C2 120200325,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP253408,,,C2_1_1.fq.gz C2_1_2.fq.gz,fastq fastq,6618974400.0,44126496.0,C2 1 1.fq.gz,0:150 1:150,A:1774116288;C:1533828286;G:1511526952;T:1799423408;N:79466,150,150,,,1774116288,1533828286,1511526952,1799423408,79466,SRX7957247,SRS6343354,SRA1056819,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.9326,,0.02973,,0.75426,,0.50678,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-03-20,Undetermined,Adult,Gonad,Reproductive System
58536,SRR11355390,SRX7957246,SRS6343353,SRP253408,PRJNA613558,Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture,PRJNA613558,Other,As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease  the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation  adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study  combined with antibiotics bioaccumulated in ovary  we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish  and thus affect egg production and survival. Therefore  ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0  1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.,,,,C1 3,C1 3,,strain:AB|isolate:C1|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:female|tissue:ovary|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|replicate:biological replicate 3|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C1 320200324,C1 320200324,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP253408,,,C1_3_1.fq.gz C1_3_2.fq.gz,fastq fastq,6837729600.0,45584864.0,C1 3 1.fq.gz,0:150 1:150,A:1831266308;C:1587032733;G:1565071069;T:1853950421;N:409069,150,150,,,1831266308,1587032733,1565071069,1853950421,409069,SRX7957246,SRS6343353,SRA1056819,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93541,,0.03212,,0.74681,,0.50268,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-03-20,Undetermined,Adult,Gonad,Reproductive System
58537,SRR11355391,SRX7957245,SRS6343352,SRP253408,PRJNA613558,Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture,PRJNA613558,Other,As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease  the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation  adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study  combined with antibiotics bioaccumulated in ovary  we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish  and thus affect egg production and survival. Therefore  ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0  1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.,,,,C1 2,C1 2,,strain:AB|isolate:C1|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:female|tissue:ovary|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|replicate:biological replicate 2|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C1 220200323,C1 220200323,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP253408,,,C1_2_2.fq.gz C1_2_1.fq.gz,fastq fastq,6860328000.0,45735520.0,C1 2 1.fq.gz,0:150 1:150,A:1838176072;C:1591277709;G:1569605888;T:1861063734;N:204597,150,150,,,1838176072,1591277709,1569605888,1861063734,204597,SRX7957245,SRS6343352,SRA1056819,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93763,,0.033,,0.74617,,0.50287,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-03-20,Undetermined,Adult,Gonad,Reproductive System
58538,SRR11355392,SRX7957244,SRS6343351,SRP253408,PRJNA613558,Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture,PRJNA613558,Other,As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease  the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation  adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study  combined with antibiotics bioaccumulated in ovary  we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish  and thus affect egg production and survival. Therefore  ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0  1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.,,,,C1 1,C1 1,,strain:AB|isolate:C1|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:female|tissue:ovary|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|replicate:biological replicate 1|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C1 120200322,C1 120200322,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP253408,,,C1_1_1.fq.gz C1_1_2.fq.gz,fastq fastq,6865547700.0,45770318.0,C1 1 1.fq.gz,0:150 1:150,A:1841774713;C:1591288582;G:1570400871;T:1861867728;N:215806,150,150,,,1841774713,1591288582,1570400871,1861867728,215806,SRX7957244,SRS6343351,SRA1056819,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93567,,0.03152,,0.74653,,0.50239,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-03-20,Undetermined,Adult,Gonad,Reproductive System
58539,SRR11355393,SRX7957243,SRS6343350,SRP253408,PRJNA613558,Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture,PRJNA613558,Other,As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease  the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation  adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study  combined with antibiotics bioaccumulated in ovary  we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish  and thus affect egg production and survival. Therefore  ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0  1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.,,,,C0 3,C0 3,,strain:AB|isolate:C0|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:female|tissue:ovary|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|replicate:biological replicate 3|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C0 320200321,C0 320200321,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP253408,,,C0_3_1.fq.gz C0_3_2.fq.gz,fastq fastq,6824622600.0,45497484.0,C0 3 1.fq.gz,0:150 1:150,A:1833660953;C:1578510104;G:1558095174;T:1854128169;N:228200,150,150,,,1833660953,1578510104,1558095174,1854128169,228200,SRX7957243,SRS6343350,SRA1056819,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93758,,0.0323,,0.75024,,0.50852,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-03-20,Undetermined,Adult,Gonad,Reproductive System
58540,SRR11355394,SRX7957242,SRS6343349,SRP253408,PRJNA613558,Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture,PRJNA613558,Other,As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease  the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation  adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study  combined with antibiotics bioaccumulated in ovary  we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish  and thus affect egg production and survival. Therefore  ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0  1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.,,,,C0 2,C0 2,,strain:AB|isolate:C0|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:female|tissue:ovary|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|replicate:biological replicate 2|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C0 220200320,C0 220200320,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP253408,,,C0_2_2.fq.gz C0_2_1.fq.gz,fastq fastq,6819326400.0,45462176.0,C0 2 1.fq.gz,0:150 1:150,A:1837661215;C:1571877614;G:1550458835;T:1859103408;N:225328,150,150,,,1837661215,1571877614,1550458835,1859103408,225328,SRX7957242,SRS6343349,SRA1056819,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93697,,0.0339,,0.74793,,0.5035,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-03-20,Undetermined,Adult,Gonad,Reproductive System
58541,SRR11355395,SRX7957241,SRS6343348,SRP253408,PRJNA613558,Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture,PRJNA613558,Other,As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease  the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation  adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study  combined with antibiotics bioaccumulated in ovary  we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish  and thus affect egg production and survival. Therefore  ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0  1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.,,,,C0 1,C0 1,,strain:AB|isolate:C0|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:female|tissue:ovary|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|replicate:biological replicate 1|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C0 120200319,C0 120200319,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP253408,,,C0_1_1.fq.gz C0_1_2.fq.gz,fastq fastq,7030804800.0,46872032.0,C0 1 1.fq.gz,0:150 1:150,A:1891469955;C:1624531422;G:1603124564;T:1911444454;N:234405,150,150,,,1891469955,1624531422,1603124564,1911444454,234405,SRX7957241,SRS6343348,SRA1056819,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93519,,0.0328,,0.74602,,0.48272,,150,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-03-20,Undetermined,Adult,Gonad,Reproductive System
60445,SRR12272862,SRX8777892,SRS7048444,SRP272672,PRJNA647444,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA,PRJNA647444,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C2,C2 C2 2 4,,replicate:biological replicate 2|strain:AB|isolate:C2|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:100ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C2C220200712,C2C220200712,RNA seq of zebrafish in different conditions,,,miRNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,SINGLE,BGISEQ,BGISEQ-500,,SRP272672,,loader:fastq load.py,C2_C2_2_4.fq,fastq,542610936.0,21965958.0,C2 C2 2 4.fq.gz,0:24.70,A:95221617;C:122628624;G:167025611;T:157730855;N:4229,24,,,,95221617,122628624,167025611,157730855,4229,SRX8777892,SRS7048444,SRA1101037,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.8119,,0.10745,,0.85717,,0.51338,,22,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-08-05,Undetermined,Embryo,Whole Organism,All anatomical structures
60446,SRR12272863,SRX8777891,SRS7048443,SRP272672,PRJNA647444,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA,PRJNA647444,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C2,C2 C2 1 4,,replicate:biological replicate 1|strain:AB|isolate:C2|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:100ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C2C220200711,C2C220200711,RNA seq of zebrafish in different conditions,,,miRNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,SINGLE,BGISEQ,BGISEQ-500,,SRP272672,,loader:fastq load.py,C2_C2_1_4.fq,fastq,542847476.0,22614181.0,C2 C2 1 4.fq.gz,0:24.00,A:99999101;C:125407906;G:162383758;T:155055099;N:1612,24,,,,99999101,125407906,162383758,155055099,1612,SRX8777891,SRS7048443,SRA1101037,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.84327,,0.10491,,0.83256,,0.52046,,19,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-08-05,Undetermined,Embryo,Whole Organism,All anatomical structures
60447,SRR12272864,SRX8777890,SRS7048442,SRP272672,PRJNA647444,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA,PRJNA647444,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C1,C1 C1 2 4,,replicate:biological replicate 2|strain:AB|isolate:C1|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:1ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C1C120200712,C1C120200712,RNA seq of zebrafish in different conditions,,,miRNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,SINGLE,BGISEQ,BGISEQ-500,,SRP272672,,loader:fastq load.py,C1_C1_2_4.fq,fastq,570918284.0,22577002.0,C1 C1 2 4.fq.gz,0:25.29,A:100121235;C:130480588;G:178656113;T:161652765;N:7583,25,,,,100121235,130480588,178656113,161652765,7583,SRX8777890,SRS7048442,SRA1101037,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.85096,,0.12542,,0.82873,,0.51535,,22,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-08-05,Undetermined,Embryo,Whole Organism,All anatomical structures
60448,SRR12272865,SRX8777889,SRS7048441,SRP272672,PRJNA647444,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA,PRJNA647444,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C1,C1 C1 1 4,,replicate:biological replicate 1|strain:AB|isolate:C1|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:1ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C1C120200711,C1C120200711,RNA seq of zebrafish in different conditions,,,miRNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,SINGLE,BGISEQ,BGISEQ-500,,SRP272672,,loader:fastq load.py,C1_C1_1_4.fq,fastq,545089417.0,22812164.0,C1 C1 1 4.fq.gz,0:23.89,A:99851844;C:125314095;G:166401335;T:153521167;N:976,23,,,,99851844,125314095,166401335,153521167,976,SRX8777889,SRS7048441,SRA1101037,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.84602,,0.11725,,0.83159,,0.51353,,19,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-08-05,Undetermined,Embryo,Whole Organism,All anatomical structures
60449,SRR12272866,SRX8777888,SRS7048440,SRP272672,PRJNA647444,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA,PRJNA647444,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C0,C0 C0 2 4,,replicate:biological replicate 2|strain:AB|isolate:C0|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:0ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C0C020200712,C0C020200712,RNA seq of zebrafish in different conditions,,,miRNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,SINGLE,BGISEQ,BGISEQ-500,,SRP272672,,loader:fastq load.py,C0_C0_2_4.fq,fastq,527443144.0,23174740.0,C0 C0 2 4.fq.gz,0:22.76,A:102368401;C:120843229;G:151690193;T:152540806;N:515,22,,,,102368401,120843229,151690193,152540806,515,SRX8777888,SRS7048440,SRA1101037,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.83063,,0.08114,,0.85169,,0.50894,,16,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-08-05,Undetermined,Embryo,Whole Organism,All anatomical structures
60450,SRR12272867,SRX8777887,SRS7048439,SRP272672,PRJNA647444,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA,PRJNA647444,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C0,C0 C0 1 4,,replicate:biological replicate 1|strain:AB|isolate:C0|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:0ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C0C020200711,C0C020200711,RNA seq of zebrafish in different conditions,,,miRNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,SINGLE,BGISEQ,BGISEQ-500,,SRP272672,,loader:fastq load.py,C0_C0_1_4.fq,fastq,511759408.0,22673361.0,C0 C0 1 4.fq.gz,0:22.57,A:100879182;C:120237907;G:142799495;T:147842595;N:229,22,,,,100879182,120237907,142799495,147842595,229,SRX8777887,SRS7048439,SRA1101037,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.83904,,0.0823,,0.84741,,0.49929,,22,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-08-05,Undetermined,Embryo,Whole Organism,All anatomical structures
60496,SRR12328853,SRX8829078,SRS7048444,SRP273655,PRJNA648800,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA,PRJNA648800,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C2,C2 C2 2 4,,replicate:biological replicate 2|strain:AB|isolate:C2|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:100ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C2C220200712,C2C220200712,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP273655,,,C2_C2_2_4_1.fq.gz C2_C2_2_4_2.fq.gz,fastq fastq,6974294600.0,69742946.0,C2 C2 2 4 1.fq.gz,0:100 1:100,A:2057162032;C:1418016219;G:1425580374;T:2073535975;N:0,100,100,,,2057162032,1418016219,1425580374,2073535975,0,SRX8829078,SRS7048444,SRA1103962,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93171,,0.17455,,0.71626,,0.54961,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-07-27,Undetermined,Embryo,Whole Organism,All anatomical structures
60497,SRR12328854,SRX8829077,SRS7048443,SRP273655,PRJNA648800,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA,PRJNA648800,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C2,C2 C2 1 4,,replicate:biological replicate 1|strain:AB|isolate:C2|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:100ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C2C220200711,C2C220200711,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP273655,,,C2_C2_1_4_2.fq.gz C2_C2_1_4_1.fq.gz,fastq fastq,6942905200.0,69429052.0,C2 C2 1 4 1.fq.gz,0:100 1:100,A:2025129308;C:1433430820;G:1434784226;T:2049560846;N:0,100,100,,,2025129308,1433430820,1434784226,2049560846,0,SRX8829077,SRS7048443,SRA1103962,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93211,,0.16662,,0.71001,,0.53674,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-07-27,Undetermined,Embryo,Whole Organism,All anatomical structures
60498,SRR12328855,SRX8829076,SRS7048442,SRP273655,PRJNA648800,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA,PRJNA648800,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C1,C1 C1 2 4,,replicate:biological replicate 2|strain:AB|isolate:C1|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:1ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C1C120200712,C1C120200712,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP273655,,,C1_C1_2_4_1.fq.gz C1_C1_2_4_2.fq.gz,fastq fastq,6973657600.0,69736576.0,C1 C1 2 4 1.fq.gz,0:100 1:100,A:2050440259;C:1423350359;G:1423015668;T:2076851314;N:0,100,100,,,2050440259,1423350359,1423015668,2076851314,0,SRX8829076,SRS7048442,SRA1103962,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.92911,,0.1877,,0.72025,,0.58085,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-07-27,Undetermined,Embryo,Whole Organism,All anatomical structures
60499,SRR12328856,SRX8829075,SRS7048441,SRP273655,PRJNA648800,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA,PRJNA648800,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C1,C1 C1 1 4,,replicate:biological replicate 1|strain:AB|isolate:C1|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:1ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C1C120200711,C1C120200711,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP273655,,,C1_C1_1_4_1.fq.gz C1_C1_1_4_2.fq.gz,fastq fastq,6746729200.0,67467292.0,C1 C1 1 4 1.fq.gz,0:100 1:100,A:2004203843;C:1356765594;G:1357760526;T:2027999237;N:0,100,100,,,2004203843,1356765594,1357760526,2027999237,0,SRX8829075,SRS7048441,SRA1103962,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.92733,,0.19903,,0.72228,,0.59259,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-07-27,Undetermined,Embryo,Whole Organism,All anatomical structures
60500,SRR12328857,SRX8829074,SRS7048440,SRP273655,PRJNA648800,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA,PRJNA648800,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C0,C0 C0 2 4,,replicate:biological replicate 2|strain:AB|isolate:C0|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:0ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C0C020200712,C0C020200712,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP273655,,,C0_C0_2_4_1.fq.gz C0_C0_2_4_2.fq.gz,fastq fastq,6924724800.0,69247248.0,C0 C0 2 4 1.fq.gz,0:100 1:100,A:1974618038;C:1471821932;G:1482725702;T:1995559128;N:0,100,100,,,1974618038,1471821932,1482725702,1995559128,0,SRX8829074,SRS7048440,SRA1103962,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93473,,0.14676,,0.69649,,0.50413,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-07-27,Undetermined,Embryo,Whole Organism,All anatomical structures
60501,SRR12328858,SRX8829073,SRS7048439,SRP273655,PRJNA648800,mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA,PRJNA648800,Other,Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.,,,,C0,C0 C0 1 4,,replicate:biological replicate 1|strain:AB|isolate:C0|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|dev stage:not applicable|sex:pooled male and female|tissue:the whole|collection date:2019 11 01|geo loc name:China: Shenzhen Guangdong|phenotype:0ug/L|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of zebrafish,C0C020200711,C0C020200711,RNA seq of zebrafish in different conditions,,,RNA-Seq,TRANSCRIPTOMIC,RANDOM PCR,PAIRED,BGISEQ,BGISEQ-500,,SRP273655,,,C0_C0_1_4_1.fq.gz C0_C0_1_4_2.fq.gz,fastq fastq,6899505600.0,68995056.0,C0 C0 1 4 1.fq.gz,0:100 1:100,A:1957459931;C:1477351919;G:1482435319;T:1982258431;N:0,100,100,,,1957459931,1477351919,1482435319,1982258431,0,SRX8829073,SRS7048439,SRA1103962,Southern University of Science and Technology|School of Environmental Science and Engineering,Southern University of Science and Technology,1,0.93567,,0.14057,,0.6883,,0.48707,,100,,B,,usable mapping rate,bgi,bgi,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2020-07-27,Undetermined,Embryo,Whole Organism,All anatomical structures