rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse 68556,SRR18028171,SRX14182301,SRS12005942,SRP359829,PRJNA807002,samll RNA seq of zebrafish gonads of wildtype and pld6 / at 22 dpf,PRJNA807002,Other,In this study we generated zebrafish pld6 knockouts and found that the pld6 null mutants developed as infertile males with testes containing no germ cells. Pld6 is considered to be a candidate ribonuclease participating in primary piRNA biogenesis which is essential for the survival of germ cells. We deep sequenced 20 33 nt total small RNAs obtained from 22 dpf wildtype and pld6 / gonad with three repetition. In pld6 / gonad small RNAs mapped to the known piRNA clusters were almost absent. Moreover piRNA clusters in pld6 / gonad lost the enrichment for uridine at the first position or for adenine at the 10th position. our results unequivocally demonstrate a conserved role for MitoPLD in the piRNA biogenesis pathway.,,,,,6WT 3,,strain:AB|isolate:replicate3|ecotype:wt|age:post fertilization day 22|dev stage:juvenile|sex:missing|tissue:Gonad|BioSampleModel:Model organism or animal,,,,,,,,,wt 3 S11 L001 R1,011,011,Zebrafish larvae were anesthetized in 0.2 mg/mL MS 222 and disected to isolate gonads under a microscope. Three wildtype or mutant gonads were mixed into one repeat and three repeats were performed for samll RNA sequencing.,,,ncRNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,HiSeq X Ten,,SRP359829,,,wt-3_S11_L001_R1_001.fastq.gz wt-3_S11_L001_R2_001.fastq.gz,fastq fastq,3576981600.0,11923272.0,wt 3 S11 L001 R1 001.fastq.gz,0:150 1:150,A:689001630;C:496844981;G:1779990511;T:610974133;N:170345,150,150,,,689001630,496844981,1779990511,610974133,170345,SRX14182301,SRS12005942,SRA1372890,Huazhong agricultural university|School of Life Science and Technology,Huazhong agricultural university,2,0.8179,0.81697,0.60905,0.60864,0.82692,0.82915,0.52425,0.52623,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2022-02-14,Multi-stage,Multi-stage,Gonad,Reproductive System 68557,SRR18028172,SRX14182300,SRS12005941,SRP359829,PRJNA807002,samll RNA seq of zebrafish gonads of wildtype and pld6 / at 22 dpf,PRJNA807002,Other,In this study we generated zebrafish pld6 knockouts and found that the pld6 null mutants developed as infertile males with testes containing no germ cells. Pld6 is considered to be a candidate ribonuclease participating in primary piRNA biogenesis which is essential for the survival of germ cells. We deep sequenced 20 33 nt total small RNAs obtained from 22 dpf wildtype and pld6 / gonad with three repetition. In pld6 / gonad small RNAs mapped to the known piRNA clusters were almost absent. Moreover piRNA clusters in pld6 / gonad lost the enrichment for uridine at the first position or for adenine at the 10th position. our results unequivocally demonstrate a conserved role for MitoPLD in the piRNA biogenesis pathway.,,,,,5WT 2,,strain:AB|isolate:replicate2|ecotype:wt|age:post fertilization day 22|dev stage:juvenile|sex:missing|tissue:Gonad|BioSampleModel:Model organism or animal,,,,,,,,,wt 2 S10 L001 R1,009,009,Zebrafish larvae were anesthetized in 0.2 mg/mL MS 222 and disected to isolate gonads under a microscope. Three wildtype or mutant gonads were mixed into one repeat and three repeats were performed for samll RNA sequencing.,,,ncRNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,HiSeq X Ten,,SRP359829,,,wt-2_S10_L001_R1_001.fastq.gz wt-2_S10_L001_R2_001.fastq.gz,fastq fastq,4200013800.0,14000046.0,wt 2 S10 L001 R1 001.fastq.gz,0:150 1:150,A:781057232;C:617020885;G:2110010128;T:691723797;N:201758,150,150,,,781057232,617020885,2110010128,691723797,201758,SRX14182300,SRS12005941,SRA1372890,Huazhong agricultural university|School of Life Science and Technology,Huazhong agricultural university,2,0.8213,0.82216,0.59414,0.59507,0.81089,0.81306,0.53839,0.52755,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2022-02-14,Multi-stage,Multi-stage,Gonad,Reproductive System 68558,SRR18028173,SRX14182299,SRS12005940,SRP359829,PRJNA807002,samll RNA seq of zebrafish gonads of wildtype and pld6 / at 22 dpf,PRJNA807002,Other,In this study we generated zebrafish pld6 knockouts and found that the pld6 null mutants developed as infertile males with testes containing no germ cells. Pld6 is considered to be a candidate ribonuclease participating in primary piRNA biogenesis which is essential for the survival of germ cells. We deep sequenced 20 33 nt total small RNAs obtained from 22 dpf wildtype and pld6 / gonad with three repetition. In pld6 / gonad small RNAs mapped to the known piRNA clusters were almost absent. Moreover piRNA clusters in pld6 / gonad lost the enrichment for uridine at the first position or for adenine at the 10th position. our results unequivocally demonstrate a conserved role for MitoPLD in the piRNA biogenesis pathway.,,,,,4WT 1,,strain:AB|isolate:replicate1|ecotype:wt|age:post fertilization day 22|dev stage:juvenile|sex:missing|tissue:Gonad|BioSampleModel:Model organism or animal,,,,,,,,,wt 1 S9 L001 R1,007,007,Zebrafish larvae were anesthetized in 0.2 mg/mL MS 222 and disected to isolate gonads under a microscope. Three wildtype or mutant gonads were mixed into one repeat and three repeats were performed for samll RNA sequencing.,,,ncRNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,HiSeq X Ten,,SRP359829,,,wt-1_S9_L001_R1_001.fastq.gz wt-1_S9_L001_R2_001.fastq.gz,fastq fastq,4820063700.0,16066879.0,wt 1 S9 L001 R1 001.fastq.gz,0:150 1:150,A:996304548;C:657334691;G:2379519106;T:786675131;N:230224,150,150,,,996304548,657334691,2379519106,786675131,230224,SRX14182299,SRS12005940,SRA1372890,Huazhong agricultural university|School of Life Science and Technology,Huazhong agricultural university,2,0.80219,0.80319,0.60906,0.60878,0.83238,0.83303,0.52559,0.51852,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2022-02-14,Multi-stage,Multi-stage,Gonad,Reproductive System 68559,SRR18028174,SRX14182298,SRS12005939,SRP359829,PRJNA807002,samll RNA seq of zebrafish gonads of wildtype and pld6 / at 22 dpf,PRJNA807002,Other,In this study we generated zebrafish pld6 knockouts and found that the pld6 null mutants developed as infertile males with testes containing no germ cells. Pld6 is considered to be a candidate ribonuclease participating in primary piRNA biogenesis which is essential for the survival of germ cells. We deep sequenced 20 33 nt total small RNAs obtained from 22 dpf wildtype and pld6 / gonad with three repetition. In pld6 / gonad small RNAs mapped to the known piRNA clusters were almost absent. Moreover piRNA clusters in pld6 / gonad lost the enrichment for uridine at the first position or for adenine at the 10th position. our results unequivocally demonstrate a conserved role for MitoPLD in the piRNA biogenesis pathway.,,,,,3PLD6 3,,strain:AB|isolate:replicate3|ecotype:pld6 / |age:post fertilization day 22|dev stage:juvenile|sex:missing|tissue:Gonad|BioSampleModel:Model organism or animal,,,,,,,,,pld6 3 S3 L003 R1,005,005,Zebrafish larvae were anesthetized in 0.2 mg/mL MS 222 and disected to isolate gonads under a microscope. Three wildtype or mutant gonads were mixed into one repeat and three repeats were performed for samll RNA sequencing.,,,ncRNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,HiSeq X Ten,,SRP359829,,,pld6-3_S3_L003_R1_001.fastq.gz pld6-3_S3_L003_R2_001.fastq.gz,fastq fastq,816686700.0,2722289.0,pld6 3 S3 L003 R1 001.fastq.gz,0:150 1:150,A:145681738;C:137123477;G:401610833;T:132256312;N:14340,150,150,,,145681738,137123477,401610833,132256312,14340,SRX14182298,SRS12005939,SRA1372890,Huazhong agricultural university|School of Life Science and Technology,Huazhong agricultural university,2,0.78314,0.73942,0.07641,0.09097,0.91603,0.91545,0.6312,0.64467,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2022-02-14,Multi-stage,Multi-stage,Gonad,Reproductive System 68560,SRR18028175,SRX14182297,SRS12005938,SRP359829,PRJNA807002,samll RNA seq of zebrafish gonads of wildtype and pld6 / at 22 dpf,PRJNA807002,Other,In this study we generated zebrafish pld6 knockouts and found that the pld6 null mutants developed as infertile males with testes containing no germ cells. Pld6 is considered to be a candidate ribonuclease participating in primary piRNA biogenesis which is essential for the survival of germ cells. We deep sequenced 20 33 nt total small RNAs obtained from 22 dpf wildtype and pld6 / gonad with three repetition. In pld6 / gonad small RNAs mapped to the known piRNA clusters were almost absent. Moreover piRNA clusters in pld6 / gonad lost the enrichment for uridine at the first position or for adenine at the 10th position. our results unequivocally demonstrate a conserved role for MitoPLD in the piRNA biogenesis pathway.,,,,,2PLD6 2,,strain:AB|isolate:replicate2|ecotype:pld6 / |age:post fertilization day 22|dev stage:juvenile|sex:missing|tissue:Gonad|BioSampleModel:Model organism or animal,,,,,,,,,pld6 2 S2 L003 R1,003,003,Zebrafish larvae were anesthetized in 0.2 mg/mL MS 222 and disected to isolate gonads under a microscope. Three wildtype or mutant gonads were mixed into one repeat and three repeats were performed for samll RNA sequencing.,,,ncRNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,HiSeq X Ten,,SRP359829,,,pld6-2_S2_L003_R1_001.fastq.gz pld6-2_S2_L003_R2_001.fastq.gz,fastq fastq,6546276900.0,21820923.0,pld6 2 S2 L003 R1 001.fastq.gz,0:150 1:150,A:1161502458;C:1095580994;G:3226725392;T:1062358099;N:109957,150,150,,,1161502458,1095580994,3226725392,1062358099,109957,SRX14182297,SRS12005938,SRA1372890,Huazhong agricultural university|School of Life Science and Technology,Huazhong agricultural university,2,0.6471,0.593,0.07935,0.09168,0.92058,0.92005,0.53626,0.65284,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2022-02-14,Multi-stage,Multi-stage,Gonad,Reproductive System 68561,SRR18028176,SRX14182296,SRS12005937,SRP359829,PRJNA807002,samll RNA seq of zebrafish gonads of wildtype and pld6 / at 22 dpf,PRJNA807002,Other,In this study we generated zebrafish pld6 knockouts and found that the pld6 null mutants developed as infertile males with testes containing no germ cells. Pld6 is considered to be a candidate ribonuclease participating in primary piRNA biogenesis which is essential for the survival of germ cells. We deep sequenced 20 33 nt total small RNAs obtained from 22 dpf wildtype and pld6 / gonad with three repetition. In pld6 / gonad small RNAs mapped to the known piRNA clusters were almost absent. Moreover piRNA clusters in pld6 / gonad lost the enrichment for uridine at the first position or for adenine at the 10th position. our results unequivocally demonstrate a conserved role for MitoPLD in the piRNA biogenesis pathway.,,,,,1PLD6 1,,strain:AB|isolate:replicate1|ecotype:pld6 / |age:post fertilization day 22|dev stage:juvenile|sex:missing|tissue:Gonad|BioSampleModel:Model organism or animal,,,,,,,,,pld6 1 S1 L003 R1,001,001,Zebrafish larvae were anesthetized in 0.2 mg/mL MS 222 and disected to isolate gonads under a microscope. Three wildtype or mutant gonads were mixed into one repeat and three repeats were performed for samll RNA sequencing.,,,ncRNA-Seq,TRANSCRIPTOMIC,other,PAIRED,ILLUMINA,HiSeq X Ten,,SRP359829,,,pld6-1_S1_L003_R1_001.fastq.gz pld6-1_S1_L003_R2_001.fastq.gz,fastq fastq,5535130200.0,18450434.0,pld6 1 S1 L003 R1 001.fastq.gz,0:150 1:150,A:1014761790;C:833992394;G:2813863824;T:872418512;N:93680,150,150,,,1014761790,833992394,2813863824,872418512,93680,SRX14182296,SRS12005937,SRA1372890,Huazhong agricultural university|School of Life Science and Technology,Huazhong agricultural university,2,0.70358,0.73288,0.08649,0.09366,0.91066,0.90914,0.6197,0.6207,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,small_rna,unknown,bulk,unknown,unknown,,China,2022-02-14,Multi-stage,Multi-stage,Gonad,Reproductive System 68777,SRR18188990,SRX14335888,SRS12150682,SRP362100,PRJNA811725,Single cell sequencing of zebra fish primordial germ cell,PRJNA811725,Other,Based on the transcriptome we constructed long non coding RNA lncRNA profile of zebrafish primordial germ cells PGCs to further discern functional lncRNA that might play role in PGCs development.,,,,,GC9,,strain:kop:EGFP 3 primeUTR nanos primordial germ cell transgenic line|isolate:Based on green fluorescence single PGC was distinctively identified and picked out using a capillary tube|age:5hpf|dev stage:30% 50% epiboly|sex:not applicable|tissue:primordial germ cell|cell type:primordial germ cell|replicate:replicate3|BioSampleModel:Model organism or animal,,,,,,,,,3pgc,3 3pgc,3 3pgc,primordial germ cell from 5 hpf zebrafish embryos,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,RANDOM,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP362100,,,GC9_R1.fq.gz GC9_R2.fq.gz,fastq fastq,16392678600.0,54642262.0,GC9 R1.fq.gz,0:150 1:150,A:4548403510;C:3786937912;G:3801036342;T:4255236177;N:1064659,150,150,,,4548403510,3786937912,3801036342,4255236177,1064659,SRX14335888,SRS12150682,SRA1379556,Sun-Yat sen University|School of Marine Science,Sun-Yat sen University,2,0.92711,0.93044,0.08622,0.08652,0.79693,0.80306,0.58096,0.58168,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,sc,single_cell_generic,generic-scrnaseq-only,,China,2022-03-02,Multi-stage,Embryo,Gonad,Reproductive System 68778,SRR18188991,SRX14335887,SRS12150683,SRP362100,PRJNA811725,Single cell sequencing of zebra fish primordial germ cell,PRJNA811725,Other,Based on the transcriptome we constructed long non coding RNA lncRNA profile of zebrafish primordial germ cells PGCs to further discern functional lncRNA that might play role in PGCs development.,,,,,GC4,,strain:kop:EGFP 3 primeUTR nanos primordial germ cell transgenic line|isolate:Based on green fluorescence single PGC was distinctively identified and picked out using a capillary tube|age:5hpf|dev stage:30% 50% epiboly|sex:not applicable|tissue:primordial germ cell|cell type:primordial germ cell|replicate:replicate2|BioSampleModel:Model organism or animal,,,,,,,,,2pgc,2 2pgc,2 2pgc,primordial germ cell from 5 hpf zebrafish embryos,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,RANDOM,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP362100,,,GC4_R1.fq.gz GC4_R2.fq.gz,fastq fastq,14471348700.0,48237829.0,GC4 R1.fq.gz,0:150 1:150,A:4127039158;C:3211803959;G:3224340004;T:3907215356;N:950223,150,150,,,4127039158,3211803959,3224340004,3907215356,950223,SRX14335887,SRS12150683,SRA1379556,Sun-Yat sen University|School of Marine Science,Sun-Yat sen University,2,0.91951,0.91886,0.14001,0.14043,0.75777,0.76605,0.55643,0.55313,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,sc,single_cell_generic,generic-scrnaseq-only,,China,2022-03-02,Multi-stage,Embryo,Gonad,Reproductive System 68779,SRR18188992,SRX14335886,SRS12150681,SRP362100,PRJNA811725,Single cell sequencing of zebra fish primordial germ cell,PRJNA811725,Other,Based on the transcriptome we constructed long non coding RNA lncRNA profile of zebrafish primordial germ cells PGCs to further discern functional lncRNA that might play role in PGCs development.,,,,,GC1,,strain:kop:EGFP 3 primeUTR nanos primordial germ cell transgenic line|isolate:Based on green fluorescence single PGC was distinctively identified and picked out using a capillary tube|age:5hpf|dev stage:30% 50% epiboly|sex:not applicable|tissue:primordial germ cell|cell type:primordial germ cell|replicate:replicate1|BioSampleModel:Model organism or animal,,,,,,,,,1pgc,1 1pgc,1 1pgc,primordial germ cell from 5 hpf zebrafish embryos,,,RNA-Seq,TRANSCRIPTOMIC SINGLE CELL,RANDOM,PAIRED,ILLUMINA,Illumina HiSeq 2500,,SRP362100,,,GC1_R1.fq.gz GC1_R2.fq.gz,fastq fastq,18801698100.0,62672327.0,GC1 R1.fq.gz,0:150 1:150,A:5242992703;C:4310290517;G:4334163362;T:4913025193;N:1226325,150,150,,,5242992703,4310290517,4334163362,4913025193,1226325,SRX14335886,SRS12150681,SRA1379556,Sun-Yat sen University|School of Marine Science,Sun-Yat sen University,2,0.93192,0.93277,0.09532,0.09559,0.78358,0.7906,0.5661,0.56344,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,sc,single_cell_generic,generic-scrnaseq-only,,China,2022-03-02,Multi-stage,Embryo,Gonad,Reproductive System 77261,SRR25434203,SRX21168298,SRS18429832,SRP451673,PRJNA999043,The transcription analysis of gonad in zebrafish,PRJNA999043,Other,To screen out the female biased genes,,,,,dmrt / 2,,isolate:not applicable|age:80days|dev stage:Adult|collection date:2021|geo loc name:China:Wuhan|sex:female|tissue:Gonad|replicate:replicate = biological replicate 6|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of gonad,dmrt2,dmrt2,screen out the key genes,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP451673,,,dmrt2_R1_.fastq.gz dmrt2_R2.fastq.gz,fastq fastq,5751045000.0,19170150.0,dmrt2 R1 .fastq.gz,0:150 1:150,A:1488645455;C:1371887358;G:1405356847;T:1485112991;N:42349,150,150,,,1488645455,1371887358,1405356847,1485112991,42349,SRX21168298,SRS18429832,SRA1681175,Chinese Academy of Sciences|Institute of Hydrology,Chinese Academy of Sciences,2,0.91589,0.91745,0.01703,0.01705,0.7637,0.76402,0.47113,0.46945,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-07-27,Multi-stage,Multi-stage,Gonad,Reproductive System 77262,SRR25434204,SRX21168297,SRS18429831,SRP451673,PRJNA999043,The transcription analysis of gonad in zebrafish,PRJNA999043,Other,To screen out the female biased genes,,,,,dmrt / 1,,isolate:not applicable|age:80days|dev stage:Adult|collection date:2021|geo loc name:China:Wuhan|sex:female|tissue:Gonad|replicate:replicate = biological replicate 5|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of gonad,dmrt1,dmrt1,screen out the key genes,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP451673,,,dmrt1_R2.fastq.gz dmrt1_R1.fastq.gz,fastq fastq,7183531200.0,23945104.0,dmrt1 R1.fastq.gz,0:150 1:150,A:1847909835;C:1724710101;G:1769658622;T:1841199904;N:52738,150,150,,,1847909835,1724710101,1769658622,1841199904,52738,SRX21168297,SRS18429831,SRA1681175,Chinese Academy of Sciences|Institute of Hydrology,Chinese Academy of Sciences,2,0.92259,0.92339,0.01692,0.01663,0.76558,0.76589,0.46917,0.46678,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-07-27,Multi-stage,Multi-stage,Gonad,Reproductive System 77263,SRR25434205,SRX21168296,SRS18429830,SRP451673,PRJNA999043,The transcription analysis of gonad in zebrafish,PRJNA999043,Other,To screen out the female biased genes,,,,,cyp17a1 / ;dmrt1 / 2,,isolate:not applicable|age:80days|dev stage:Adult|collection date:2021|geo loc name:China:Wuhan|sex:female|tissue:Gonad|replicate:replicate = biological replicate 4|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of gonad,dko2,dko2,screen out the key genes,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP451673,,,dko2_R2.fastq.gz dko2_R1.fastq.gz,fastq fastq,6765257700.0,22550859.0,dko2 R1.fastq.gz,0:150 1:150,A:1746873541;C:1617601783;G:1668365344;T:1732367309;N:49723,150,150,,,1746873541,1617601783,1668365344,1732367309,49723,SRX21168296,SRS18429830,SRA1681175,Chinese Academy of Sciences|Institute of Hydrology,Chinese Academy of Sciences,2,0.90858,0.90858,0.02015,0.01977,0.7612,0.76213,0.46791,0.47242,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-07-27,Multi-stage,Multi-stage,Gonad,Reproductive System 77264,SRR25434206,SRX21168295,SRS18429829,SRP451673,PRJNA999043,The transcription analysis of gonad in zebrafish,PRJNA999043,Other,To screen out the female biased genes,,,,,cyp17a1 / ;dmrt1 / 1,,isolate:not applicable|age:80days|dev stage:Adult|collection date:2021|geo loc name:China:Wuhan|sex:female|tissue:Gonad|replicate:replicate = biological replicate 3|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of gonad,dko1,dko1,screen out the key genes,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP451673,,,dko1_R1.fastq.gz dko1_R2.fastq.gz,fastq fastq,6638354100.0,22127847.0,dko1 R1.fastq.gz,0:150 1:150,A:1713258874;C:1593272953;G:1635070441;T:1696702837;N:48995,150,150,,,1713258874,1593272953,1635070441,1696702837,48995,SRX21168295,SRS18429829,SRA1681175,Chinese Academy of Sciences|Institute of Hydrology,Chinese Academy of Sciences,2,0.9182,0.91984,0.022,0.02186,0.76118,0.76167,0.47656,0.48847,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-07-27,Multi-stage,Multi-stage,Gonad,Reproductive System 77265,SRR25434207,SRX21168294,SRS18429828,SRP451673,PRJNA999043,The transcription analysis of gonad in zebrafish,PRJNA999043,Other,To screen out the female biased genes,,,,,Control2,,isolate:not applicable|age:80days|dev stage:Adult|collection date:2021|geo loc name:China:Wuhan|sex:female|tissue:Gonad|replicate:replicate = biological replicate 2|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of gonad,conf2,conf2,screen out the key genes,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP451673,,,conf2_R1.fastq.gz conf2_R2.fastq.gz,fastq fastq,6223727700.0,20745759.0,conf2 R1.fastq.gz,0:150 1:150,A:1590221936;C:1500196214;G:1554765877;T:1578496570;N:47103,150,150,,,1590221936,1500196214,1554765877,1578496570,47103,SRX21168294,SRS18429828,SRA1681175,Chinese Academy of Sciences|Institute of Hydrology,Chinese Academy of Sciences,2,0.92354,0.92626,0.01495,0.01561,0.76398,0.76418,0.47103,0.46492,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-07-27,Multi-stage,Multi-stage,Gonad,Reproductive System 77266,SRR25434208,SRX21168293,SRS18429827,SRP451673,PRJNA999043,The transcription analysis of gonad in zebrafish,PRJNA999043,Other,To screen out the female biased genes,,,,,Control1,,isolate:not applicable|age:80days|dev stage:Adult|collection date:2021|geo loc name:China:Wuhan|sex:female|tissue:Gonad|replicate:replicate = biological replicate 1|BioSampleModel:Model organism or animal,,,,,,,,,RNA seq of gonad,conf1,conf1,screen out the key genes,,,RNA-Seq,TRANSCRIPTOMIC,PolyA,PAIRED,ILLUMINA,Illumina NovaSeq 6000,,SRP451673,,,conf1_R1.fastq.gz conf1_R2.fastq.gz,fastq fastq,6799767600.0,22665892.0,conf1 R1.fastq.gz,0:150 1:150,A:1740276620;C:1642790185;G:1671812697;T:1744859854;N:28244,150,150,,,1740276620,1642790185,1671812697,1744859854,28244,SRX21168293,SRS18429827,SRA1681175,Chinese Academy of Sciences|Institute of Hydrology,Chinese Academy of Sciences,2,0.93305,0.93328,0.01522,0.01517,0.76477,0.76627,0.47519,0.47422,150,150,B,B,biological fallback assumption,illumina,novaseq_era,unknown,poly_a,unknown,bulk,unknown,unknown,,China,2023-07-27,Multi-stage,Multi-stage,Gonad,Reproductive System