rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
41248,SRR3985378,SRX1987647,SRS1591650,SRP080226,PRJNA335774,wt vs mutant zebrafish Raw sequence reads,PRJNA335774,Other,be related to IS,,,mutant,Stat3 zebrafish,Stat3,,strain:AB line|age:1 month|dev stage:juvenile fish|sex:not determined|tissue:b1|biomaterial provider:nstitute of hydrobiology|treatment:KO|BioSampleModel:Model organism or animal,,,,,,,,,stat3 mutant,stat3 mutant,1,1,,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2500,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>4000</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>2001</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP080226,,,Stat3_1.fq.gz Stat3_2.fq.gz,fastq fastq,8539658400.0,28465528.0,stat3 mutant,0:150 1:150,A:2247683479;C:2023626545;G:2038225527;T:2229672357;N:450492,150,150,,,2247683479,2023626545,2038225527,2229672357,450492,SRX1987647,SRS1591650,SRA445588,Huazhong Agricultural University,Huazhong Agricultural University,2,0.88446,0.81717,0.0523,0.04777,0.69887,0.70642,0.45266,0.49099,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,unknown,unknown,,China,2017-01-18,Juvenile,Juvenile,Undetermined,Undetermined
41249,SRR3985375,SRX1987645,SRS1591255,SRP080226,PRJNA335774,wt vs mutant zebrafish Raw sequence reads,PRJNA335774,Other,be related to IS,,,wild type,,wild type zebrafish,,strain:AB|age:1 month|dev stage:juvenile fish|sex:not determined|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,wild type zebrafish,wild type control,1,1,,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2500,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>4000</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>2001</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP080226,,,WT-1_1.fq.gz WT-1_2.fq.gz,fastq fastq,8539964400.0,28466548.0,wild type control,0:150 1:150,A:2252816933;C:2019884847;G:2037382553;T:2229414884;N:465183,150,150,,,2252816933,2019884847,2037382553,2229414884,465183,SRX1987645,SRS1591255,SRA445586,Huazhong Agricultural University,Huazhong Agricultural University,2,0.88395,0.81555,0.05189,0.04746,0.69134,0.69921,0.4902,0.49597,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,unknown,unknown,,China,2017-01-18,Juvenile,Juvenile,Undetermined,Undetermined
41509,SRR4994225,SRX2329687,SRS1591255,SRP092647,PRJNA352610,Danio rerio strain:AB Raw sequence reads,PRJNA352610,Whole Genome Sequencing,wild type,,,wild type,,wild type zebrafish,,strain:AB|age:1 month|dev stage:juvenile fish|sex:not determined|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,wild type,wild type zebrafish,1,1,,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2500,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>4000</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>2001</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP092647,,,,,8539964400.0,28466548.0,wild type zebrafish,0:150 1:150,A:2252816933;C:2019884847;G:2037382553;T:2229414884;N:465183,150,150,,,2252816933,2019884847,2037382553,2229414884,465183,SRX2329687,SRS1591255,SRA490795,Huazhong Agricultural University,Huazhong Agricultural University,2,0.88393,0.81554,0.05185,0.04727,0.69138,0.69905,0.49044,0.49588,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,unknown,unknown,,China,2016-11-07,Juvenile,Juvenile,Undetermined,Undetermined
41510,SRR4994317,SRX2329715,SRS1591650,SRP092650,PRJNA352611,Danio rerio strain:AB Raw sequence reads,PRJNA352611,Whole Genome Sequencing,provide a clue for studying congenital scoliosis desease,,,mutant,Stat3 zebrafish,Stat3,,strain:AB line|age:1 month|dev stage:juvenile fish|sex:not determined|tissue:b1|biomaterial provider:nstitute of hydrobiology|treatment:KO|BioSampleModel:Model organism or animal,,,,,,,,,stat3 mutant,stat3,1,1,,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2500,<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>4000</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>2001</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>,SRP092650,,,,,8539658400.0,28465528.0,stat3,0:150 1:150,A:2247683479;C:2023626545;G:2038225527;T:2229672357;N:450492,150,150,,,2247683479,2023626545,2038225527,2229672357,450492,SRX2329715,SRS1591650,SRA490799,Huazhong Agricultural University,Huazhong Agricultural University,2,0.88451,0.81718,0.05225,0.0476,0.69885,0.7065,0.48442,0.49075,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,unknown,unknown,,China,2016-11-07,Juvenile,Juvenile,Undetermined,Undetermined
68548,SRR18056674,SRX14208687,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT6,6,6,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT6.R1.fq.gz SS3WT6.R2.fq.gz,fastq fastq,7174164397.0,25400980.0,SS3WT6.R1.fq.gz,0:141.31 1:141.13,A:1934605412;C:1644763885;G:1664938935;T:1929811138;N:45027,141,141,,,1934605412,1644763885,1664938935,1929811138,45027,SRX14208687,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94928,0.94948,0.09187,0.09099,0.68765,0.68769,0.50435,0.50363,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68549,SRR18056675,SRX14208686,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT5,5,5,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT5.R1.fq.gz SS3WT5.R2.fq.gz,fastq fastq,7159028081.0,25133913.0,SS3WT5.R1.fq.gz,0:142.50 1:142.33,A:1905921436;C:1664337487;G:1683294939;T:1905427825;N:46394,142,142,,,1905921436,1664337487,1683294939,1905427825,46394,SRX14208686,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94917,0.95027,0.09384,0.09347,0.6594,0.65894,0.49218,0.49202,122,122,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68550,SRR18056676,SRX14208685,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT4,4,4,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT4.R1.fq.gz SS3WT4.R2.fq.gz,fastq fastq,6985092696.0,24360978.0,SS3WT4.R1.fq.gz,0:143.44 1:143.29,A:1858629258;C:1624045323;G:1642960060;T:1859412787;N:45268,143,143,,,1858629258,1624045323,1642960060,1859412787,45268,SRX14208685,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94221,0.94208,0.1047,0.1038,0.66231,0.66251,0.49213,0.49128,113,112,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68551,SRR18056677,SRX14208684,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT3,3,3,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT3.R1.fq.gz SS3WT3.R2.fq.gz,fastq fastq,6604271936.0,23189546.0,SS3WT3.R1.fq.gz,0:142.47 1:142.32,A:1765899330;C:1527534084;G:1543609939;T:1767186572;N:42011,142,142,,,1765899330,1527534084,1543609939,1767186572,42011,SRX14208684,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94017,0.94088,0.10254,0.10225,0.65163,0.65167,0.47798,0.47707,131,131,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68552,SRR18056678,SRX14208683,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT2,2,2,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT2.R1.fq.gz SS3WT2.R2.fq.gz,fastq fastq,6674317073.0,23265242.0,SS3WT2.R1.fq.gz,0:143.52 1:143.36,A:1768071045;C:1560492667;G:1576548690;T:1769161220;N:43451,143,143,,,1768071045,1560492667,1576548690,1769161220,43451,SRX14208683,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94677,0.9473,0.08956,0.08902,0.66559,0.66557,0.48058,0.48136,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined
68553,SRR18056679,SRX14208682,SRS12030730,SRP360305,PRJNA806354,Danio rerio Raw sequence reads,PRJNA806354,Whole Genome Sequencing,Danio rerio RNA seq reads,,,,Model organism or animal sample from Danio rerio,sample 001,,breed:AB|age:50dpf|sex:not collected|tissue:b1|BioSampleModel:Model organism or animal,,,,,,,,,SS3WT1,1,1,commen method,,,RNA-Seq,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,HiSeq X Ten,,SRP360305,,,SS3WT1.R1.fq.gz SS3WT1.R2.fq.gz,fastq fastq,6848211264.0,23787995.0,SS3WT1.R1.fq.gz,0:144.06 1:143.82,A:1825907736;C:1587014566;G:1607121352;T:1828122105;N:45505,144,143,,,1825907736,1587014566,1607121352,1828122105,45505,SRX14208682,SRS12030730,SRA1373545,Shanghai Ocean University|College of Fisheries and life,Shanghai Ocean University,2,0.94226,0.94255,0.09053,0.08971,0.65807,0.65823,0.48525,0.48427,150,150,B,B,biological fallback assumption,illumina,hiseq_era,unknown,random_priming,unknown,bulk,unknown,unknown,,China,2022-02-22,Juvenile,Juvenile,Undetermined,Undetermined