rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
14961,ERR273891,ERX248167,ERS195627,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886541,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:35Z|External Id:SAMEA1886541|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:35Z|INSDC status:public|Submitter Id:ZMP phenotype 8 3 sibling sc 2012 11 27T16:31:03Z 1518914|common name:zebrafish|sample description:Morphologically normal sibling zebrafish embryos from zmp ph 8 knockout incross 3. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 3 sibling sc 2012 11 27T16:31:03Z 1518914|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 8#12,6469781,Illumina sequencing of library 6469781  constructed from sample accession ERS195627 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 8.  This submission includes reads tagged with the sequence CTTGTA.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_8#12.bam,bam,2310315300.0,15402102.0,SC RUN 9217 8#12,0:75 1:75,A:633594099;C:528401095;G:519606107;T:627942641;N:771358,75,75,,,633594099,528401095,519606107,627942641,771358,ERX248167,ERS195627,ERA212581,SC,Wellcome Sanger Institute,2,0.94121,0.94009,0.12841,0.12876,0.67614,0.67748,0.46095,0.46798,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14962,ERR273890,ERX248166,ERS195626,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886538,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886538|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 3 mutant sc 2012 11 27T16:31:02Z 1518913|common name:zebrafish|sample description:Morphologically abnormal zebrafish embryos from zmp ph 8 knockout incross 3. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 3 mutant sc 2012 11 27T16:31:02Z 1518913|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 8#11,6469780,Illumina sequencing of library 6469780  constructed from sample accession ERS195626 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 8.  This submission includes reads tagged with the sequence GGCTAC.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_8#11.bam,bam,2197512300.0,14650082.0,SC RUN 9217 8#11,0:75 1:75,A:605841388;C:499071036;G:493858260;T:598012836;N:728780,75,75,,,605841388,499071036,493858260,598012836,728780,ERX248166,ERS195626,ERA212581,SC,Wellcome Sanger Institute,2,0.93682,0.93652,0.14468,0.14508,0.67714,0.67886,0.45342,0.44383,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14963,ERR273889,ERX248165,ERS195625,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886532,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886532|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 2 sibling sc 2012 11 27T16:31:01Z 1518912|common name:zebrafish|sample description:Morphologically normal sibling zebrafish embryos from zmp ph 8 knockout incross 2. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 2 sibling sc 2012 11 27T16:31:01Z 1518912|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 8#10,6469779,Illumina sequencing of library 6469779  constructed from sample accession ERS195625 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 8.  This submission includes reads tagged with the sequence TAGCTT.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_8#10.bam,bam,1518899700.0,10125998.0,SC RUN 9217 8#10,0:75 1:75,A:412046756;C:352073795;G:347037471;T:407229340;N:512338,75,75,,,412046756,352073795,347037471,407229340,512338,ERX248165,ERS195625,ERA212581,SC,Wellcome Sanger Institute,2,0.94329,0.9435,0.1358,0.13787,0.68298,0.68436,0.47871,0.47678,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14964,ERR273888,ERX248164,ERS195624,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886539,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:35Z|External Id:SAMEA1886539|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:35Z|INSDC status:public|Submitter Id:ZMP phenotype 8 2 mutant sc 2012 11 27T16:30:59Z 1518911|common name:zebrafish|sample description:Morphologically abnormal zebrafish embryos from zmp ph 8 knockout incross 2. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 2 mutant sc 2012 11 27T16:30:59Z 1518911|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 8#9,6469778,Illumina sequencing of library 6469778  constructed from sample accession ERS195624 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 8.  This submission includes reads tagged with the sequence GATCAG.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_8#9.bam,bam,1605688950.0,10704593.0,SC RUN 9217 8#9,0:75 1:75,A:439236098;C:368742547;G:361235163;T:435943464;N:531678,75,75,,,439236098,368742547,361235163,435943464,531678,ERX248164,ERS195624,ERA212581,SC,Wellcome Sanger Institute,2,0.93915,0.93882,0.13923,0.13977,0.67468,0.67663,0.4507,0.45363,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14965,ERR273887,ERX248163,ERS195623,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886537,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886537|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 1 sibling sc 2012 11 27T16:30:58Z 1518910|common name:zebrafish|sample description:Morphologically normal sibling zebrafish embryos from zmp ph 8 knockout incross 1. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 1 sibling sc 2012 11 27T16:30:58Z 1518910|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 8#8,6469777,Illumina sequencing of library 6469777  constructed from sample accession ERS195623 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 8.  This submission includes reads tagged with the sequence ACTTGA.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_8#8.bam,bam,2569295250.0,17128635.0,SC RUN 9217 8#8,0:75 1:75,A:687367533;C:603633435;G:600271276;T:677164225;N:858781,75,75,,,687367533,603633435,600271276,677164225,858781,ERX248163,ERS195623,ERA212581,SC,Wellcome Sanger Institute,2,0.94399,0.94343,0.13238,0.13278,0.69047,0.69303,0.50113,0.50267,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14966,ERR273886,ERX248162,ERS195622,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886543,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886543|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 1 mutant sc 2012 11 27T16:30:57Z 1518909|common name:zebrafish|sample description:Morphologically abnormal zebrafish embryos from zmp ph 8 knockout incross 1. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 1 mutant sc 2012 11 27T16:30:57Z 1518909|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 8#7,6469776,Illumina sequencing of library 6469776  constructed from sample accession ERS195622 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 8.  This submission includes reads tagged with the sequence CAGATC.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_8#7.bam,bam,2611623450.0,17410823.0,SC RUN 9217 8#7,0:75 1:75,A:719995222;C:591279714;G:590332226;T:709144896;N:871392,75,75,,,719995222,591279714,590332226,709144896,871392,ERX248162,ERS195622,ERA212581,SC,Wellcome Sanger Institute,2,0.93603,0.93598,0.14074,0.14096,0.68132,0.68367,0.46283,0.46253,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14979,ERR273873,ERX248149,ERS195627,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886541,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:35Z|External Id:SAMEA1886541|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:35Z|INSDC status:public|Submitter Id:ZMP phenotype 8 3 sibling sc 2012 11 27T16:31:03Z 1518914|common name:zebrafish|sample description:Morphologically normal sibling zebrafish embryos from zmp ph 8 knockout incross 3. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 3 sibling sc 2012 11 27T16:31:03Z 1518914|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 7#12,6469781,Illumina sequencing of library 6469781  constructed from sample accession ERS195627 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 7.  This submission includes reads tagged with the sequence CTTGTA.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_7#12.bam,bam,2303214000.0,15354760.0,SC RUN 9217 7#12,0:75 1:75,A:631760548;C:526687829;G:518000584;T:625999378;N:765661,75,75,,,631760548,526687829,518000584,625999378,765661,ERX248149,ERS195627,ERA212581,SC,Wellcome Sanger Institute,2,0.94136,0.94026,0.12751,0.12827,0.67758,0.67969,0.46751,0.46964,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14980,ERR273872,ERX248148,ERS195626,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886538,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886538|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 3 mutant sc 2012 11 27T16:31:02Z 1518913|common name:zebrafish|sample description:Morphologically abnormal zebrafish embryos from zmp ph 8 knockout incross 3. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 3 mutant sc 2012 11 27T16:31:02Z 1518913|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 7#11,6469780,Illumina sequencing of library 6469780  constructed from sample accession ERS195626 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 7.  This submission includes reads tagged with the sequence GGCTAC.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_7#11.bam,bam,2191529250.0,14610195.0,SC RUN 9217 7#11,0:75 1:75,A:604404279;C:497500521;G:492517483;T:596386777;N:720190,75,75,,,604404279,497500521,492517483,596386777,720190,ERX248148,ERS195626,ERA212581,SC,Wellcome Sanger Institute,2,0.93745,0.93601,0.14587,0.14608,0.67771,0.67996,0.46712,0.459,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14981,ERR273871,ERX248147,ERS195625,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886532,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886532|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 2 sibling sc 2012 11 27T16:31:01Z 1518912|common name:zebrafish|sample description:Morphologically normal sibling zebrafish embryos from zmp ph 8 knockout incross 2. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 2 sibling sc 2012 11 27T16:31:01Z 1518912|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 7#10,6469779,Illumina sequencing of library 6469779  constructed from sample accession ERS195625 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 7.  This submission includes reads tagged with the sequence TAGCTT.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_7#10.bam,bam,1513703550.0,10091357.0,SC RUN 9217 7#10,0:75 1:75,A:410787377;C:350732170;G:345859465;T:405824283;N:500255,75,75,,,410787377,350732170,345859465,405824283,500255,ERX248147,ERS195625,ERA212581,SC,Wellcome Sanger Institute,2,0.9427,0.94284,0.13663,0.13836,0.68343,0.68586,0.47702,0.47094,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14982,ERR273870,ERX248146,ERS195624,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886539,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:35Z|External Id:SAMEA1886539|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:35Z|INSDC status:public|Submitter Id:ZMP phenotype 8 2 mutant sc 2012 11 27T16:30:59Z 1518911|common name:zebrafish|sample description:Morphologically abnormal zebrafish embryos from zmp ph 8 knockout incross 2. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 2 mutant sc 2012 11 27T16:30:59Z 1518911|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 7#9,6469778,Illumina sequencing of library 6469778  constructed from sample accession ERS195624 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 7.  This submission includes reads tagged with the sequence GATCAG.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_7#9.bam,bam,1600259850.0,10668399.0,SC RUN 9217 7#9,0:75 1:75,A:437913621;C:367325609;G:360019868;T:434465844;N:534908,75,75,,,437913621,367325609,360019868,434465844,534908,ERX248146,ERS195624,ERA212581,SC,Wellcome Sanger Institute,2,0.93889,0.93805,0.13842,0.13935,0.67594,0.67758,0.45596,0.45934,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14983,ERR273869,ERX248145,ERS195623,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886537,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886537|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 1 sibling sc 2012 11 27T16:30:58Z 1518910|common name:zebrafish|sample description:Morphologically normal sibling zebrafish embryos from zmp ph 8 knockout incross 1. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 1 sibling sc 2012 11 27T16:30:58Z 1518910|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 7#8,6469777,Illumina sequencing of library 6469777  constructed from sample accession ERS195623 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 7.  This submission includes reads tagged with the sequence ACTTGA.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_7#8.bam,bam,2562061800.0,17080412.0,SC RUN 9217 7#8,0:75 1:75,A:685640040;C:601716737;G:598722783;T:675132099;N:850141,75,75,,,685640040,601716737,598722783,675132099,850141,ERX248145,ERS195623,ERA212581,SC,Wellcome Sanger Institute,2,0.94423,0.94296,0.13223,0.13258,0.69071,0.69301,0.49301,0.49702,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14984,ERR273868,ERX248144,ERS195622,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886543,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886543|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 1 mutant sc 2012 11 27T16:30:57Z 1518909|common name:zebrafish|sample description:Morphologically abnormal zebrafish embryos from zmp ph 8 knockout incross 1. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 1 mutant sc 2012 11 27T16:30:57Z 1518909|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9217 7#7,6469776,Illumina sequencing of library 6469776  constructed from sample accession ERS195622 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9217 7.  This submission includes reads tagged with the sequence CAGATC.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 13|ENA LAST UPDATE:2018 11 16,9217_7#7.bam,bam,2604324000.0,17362160.0,SC RUN 9217 7#7,0:75 1:75,A:718114710;C:589440349;G:588811966;T:707085884;N:871091,75,75,,,718114710,589440349,588811966,707085884,871091,ERX248144,ERS195622,ERA212581,SC,Wellcome Sanger Institute,2,0.93727,0.93671,0.14108,0.14176,0.68316,0.6854,0.46272,0.46476,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14997,ERR271390,ERX245617,ERS195627,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886541,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:35Z|External Id:SAMEA1886541|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:35Z|INSDC status:public|Submitter Id:ZMP phenotype 8 3 sibling sc 2012 11 27T16:31:03Z 1518914|common name:zebrafish|sample description:Morphologically normal sibling zebrafish embryos from zmp ph 8 knockout incross 3. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 3 sibling sc 2012 11 27T16:31:03Z 1518914|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9201 6#12,6469781,Illumina sequencing of library 6469781  constructed from sample accession ERS195627 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9201 6.  This submission includes reads tagged with the sequence CTTGTA.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 07|ENA LAST UPDATE:2018 11 16,9201_6#12.bam,bam,1878846900.0,12525646.0,SC RUN 9201 6#12,0:75 1:75,A:514561892;C:429839016;G:422805267;T:510698286;N:942439,75,75,,,514561892,429839016,422805267,510698286,942439,ERX245617,ERS195627,ERA211703,SC,Wellcome Sanger Institute,2,0.94133,0.94,0.12875,0.12884,0.67795,0.67971,0.46257,0.45975,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14998,ERR271389,ERX245616,ERS195626,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886538,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886538|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 3 mutant sc 2012 11 27T16:31:02Z 1518913|common name:zebrafish|sample description:Morphologically abnormal zebrafish embryos from zmp ph 8 knockout incross 3. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 3 mutant sc 2012 11 27T16:31:02Z 1518913|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9201 6#11,6469780,Illumina sequencing of library 6469780  constructed from sample accession ERS195626 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9201 6.  This submission includes reads tagged with the sequence GGCTAC.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 07|ENA LAST UPDATE:2018 11 16,9201_6#11.bam,bam,1791468750.0,11943125.0,SC RUN 9201 6#11,0:75 1:75,A:493236493;C:407035217;G:402855646;T:487439825;N:901569,75,75,,,493236493,407035217,402855646,487439825,901569,ERX245616,ERS195626,ERA211703,SC,Wellcome Sanger Institute,2,0.93754,0.9356,0.14614,0.14647,0.67724,0.67856,0.45561,0.44999,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
14999,ERR271388,ERX245615,ERS195625,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886532,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886532|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 2 sibling sc 2012 11 27T16:31:01Z 1518912|common name:zebrafish|sample description:Morphologically normal sibling zebrafish embryos from zmp ph 8 knockout incross 2. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 2 sibling sc 2012 11 27T16:31:01Z 1518912|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9201 6#10,6469779,Illumina sequencing of library 6469779  constructed from sample accession ERS195625 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9201 6.  This submission includes reads tagged with the sequence TAGCTT.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 07|ENA LAST UPDATE:2018 11 16,9201_6#10.bam,bam,1233052650.0,8220351.0,SC RUN 9201 6#10,0:75 1:75,A:334146519;C:285833801;G:281824558;T:330623398;N:624374,75,75,,,334146519,285833801,281824558,330623398,624374,ERX245615,ERS195625,ERA211703,SC,Wellcome Sanger Institute,2,0.94305,0.94176,0.13533,0.13577,0.68292,0.68286,0.476,0.47409,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
15000,ERR271387,ERX245614,ERS195624,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886539,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:35Z|External Id:SAMEA1886539|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:35Z|INSDC status:public|Submitter Id:ZMP phenotype 8 2 mutant sc 2012 11 27T16:30:59Z 1518911|common name:zebrafish|sample description:Morphologically abnormal zebrafish embryos from zmp ph 8 knockout incross 2. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 2 mutant sc 2012 11 27T16:30:59Z 1518911|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9201 6#9,6469778,Illumina sequencing of library 6469778  constructed from sample accession ERS195624 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9201 6.  This submission includes reads tagged with the sequence GATCAG.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 07|ENA LAST UPDATE:2018 11 16,9201_6#9.bam,bam,1307158050.0,8714387.0,SC RUN 9201 6#9,0:75 1:75,A:357170484;C:300163456;G:294213417;T:354956106;N:654587,75,75,,,357170484,300163456,294213417,354956106,654587,ERX245614,ERS195624,ERA211703,SC,Wellcome Sanger Institute,2,0.93911,0.93751,0.13707,0.13723,0.67379,0.67564,0.46345,0.46034,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
15001,ERR271386,ERX245613,ERS195623,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886537,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886537|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 1 sibling sc 2012 11 27T16:30:58Z 1518910|common name:zebrafish|sample description:Morphologically normal sibling zebrafish embryos from zmp ph 8 knockout incross 1. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 1 sibling sc 2012 11 27T16:30:58Z 1518910|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9201 6#8,6469777,Illumina sequencing of library 6469777  constructed from sample accession ERS195623 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9201 6.  This submission includes reads tagged with the sequence ACTTGA.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 07|ENA LAST UPDATE:2018 11 16,9201_6#8.bam,bam,2093759100.0,13958394.0,SC RUN 9201 6#8,0:75 1:75,A:559506384;C:491929011;G:489425570;T:551850915;N:1047220,75,75,,,559506384,491929011,489425570,551850915,1047220,ERX245613,ERS195623,ERA211703,SC,Wellcome Sanger Institute,2,0.94432,0.94329,0.13058,0.13185,0.69041,0.69114,0.49144,0.5038,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures
15002,ERR271385,ERX245612,ERS195622,ERP001991,PRJEB673,RNAseq vs DeTCT comparison,RNAseq_vs_DeTCT_comparison-sc-2012-11-27T16:22:06Z-2445,Transcriptome Analysis,Paired end sequence data from the IlluminaHiSeq was prepared from mutant and wild type zebrafish embryos for transcriptome profiling,,,,,SAMEA1886543,SC,ArrayExpress DevelopmentalStage:Hatching   Long   pec ZFS:0000033|ArrayExpress OrganismPart:Whole Embryo|ArrayExpress Species:Danio rerio|ENA FIRST PUBLIC:2013 05 07T10:06:35Z|ENA LAST UPDATE:2018 03 08T16:09:24Z|External Id:SAMEA1886543|INSDC center name:SC|INSDC first public:2013 05 07T10:06:35Z|INSDC last update:2018 03 08T16:09:24Z|INSDC status:public|Submitter Id:ZMP phenotype 8 1 mutant sc 2012 11 27T16:30:57Z 1518909|common name:zebrafish|sample description:Morphologically abnormal zebrafish embryos from zmp ph 8 knockout incross 1. More information describing the mutant phenotype can be found at the Wellcome Trust Sanger Institute Zebrafish Mutation Project website http://www.sanger.ac.uk/cgi bin/Projects/D rerio/zmp/search.pl?q=zmp ph8|sample name:ZMP phenotype 8 1 mutant sc 2012 11 27T16:30:57Z 1518909|scientific name:Danio rerio|strain:mixed,,,,,,,,,1,SC EXP 9201 6#7,6469776,Illumina sequencing of library 6469776  constructed from sample accession ERS195622 for study accession ERP001991.  This is part of an Illumina multiplexed sequencing run 9201 6.  This submission includes reads tagged with the sequence CAGATC.,Illumina cDNA protocol,,RNA-Seq,TRANSCRIPTOMIC,cDNA,PAIRED,ILLUMINA,Illumina HiSeq 2000,,ERP001991,Illumina HiSeq 2000 paired end sequencing,ENA FIRST PUBLIC:2013 05 07|ENA LAST UPDATE:2018 11 16,9201_6#7.bam,bam,2119712550.0,14131417.0,SC RUN 9201 6#7,0:75 1:75,A:583700274;C:479941691;G:479373820;T:575634850;N:1061915,75,75,,,583700274,479941691,479373820,575634850,1061915,ERX245612,ERS195622,ERA211703,SC,Wellcome Sanger Institute,2,0.93815,0.93675,0.14169,0.14181,0.68028,0.68215,0.46227,0.46055,75,75,B,B,biological fallback assumption,illumina,hiseq_era,unknown,cdna_unspecified,unknown,bulk,bulk,detct,,United Kingdom,2013-05-07,Hatching,Embryo,Whole Organism,All anatomical structures