rowid,run.accession,experiment.accession,sample.accession,study.accession,bioproject,study.title,study.alias,study.type,study.abstract,study.attributes,study.PMIDs,sample.description,sample.title,sample.alias,sample.centername,sample.attributes,GEOsample.title,GEOsample.dataprocessing,GEOsample.source,GEOsample.treatmentprotocol,GEOsample.extractprotocol,GEOsample.growthprotocol,GEOsample.characteristics,GEOsample.accession,experiment.title,experiment.alias,experiment.library_name,experiment.design_description,experiment.library_construction_protocol,experiment.attributes,experiment.library_strategy,experiment.library_source,experiment.library_selection,experiment.library_layout,experiment.platform,experiment.instrument_model,experiment.spot_descriptor,experiment.study_ref,run.title,run.attributes,run.filename,run.semantic_name,run.total_bases,run.total_spots,run.alias,run.read_lengths,run.base_counts,run.r1_length,run.r2_length,run.r3_length,run.r4_length,run.Acount,run.Ccount,run.Gcount,run.Tcount,run.Ncount,run.experiment,run.pool_member,submission.accession,submission.srasource,submission.bioprojectsource,seqdetective.n_mates,seqdetective.mapping_rate.mate1,seqdetective.mapping_rate.mate2,seqdetective.nofeature_rate.mate1,seqdetective.nofeature_rate.mate2,seqdetective.sparsity.mate1,seqdetective.sparsity.mate2,seqdetective.pos_strand_rate.mate1,seqdetective.pos_strand_rate.mate2,seqdetective.readlen.mate1,seqdetective.readlen.mate2,seqdetective.judgement.mate1,seqdetective.judgement.mate2,seqdetective.judgement.reason,platform_family,instrument_generation,read_bias,selection_class,prep_kit,sc_or_bulk,tech_class,technology,tech_variant,submission.bioprojectsource.country,earliest_date,devstage_curation,devstage_curation_coarse,tissue_curation,tissue_curation_coarse
48754,SRR7789608,SRX4644395,SRS3742465,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 3hpf 2 S1,,strain:5D|isolate:91|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 3hpf 2 S1,DMSO 3hpf 2 S1,DMSO 3hpf 2 S1,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-3hpf-2_S1_L001_R1_001.fastq.gz DMSO-3hpf-2_S1_L001_R2_001.fastq.gz,fastq fastq,143035914.0,673342.0,DMSO 3hpf 2 S1 L001 R2 001.fastq.gz,0:106.19 1:106.24,A:37104542;C:34199194;G:34286529;T:36802368;N:643281,106,106,,,37104542,34199194,34286529,36802368,643281,SRX4644395,SRS3742465,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.97329,0.97288,0.00018,0.00017,0.99931,0.99931,0.41042,0.4514,39,39,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures
48755,SRR7789609,SRX4644394,SRS3742464,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 3hpf 3 S2,,strain:5D|isolate:92|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 3hpf 3 S2,DMSO 3hpf 3 S2,DMSO 3hpf 3 S2,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-3hpf-3_S2_L001_R2_001.fastq.gz DMSO-3hpf-3_S2_L001_R1_001.fastq.gz,fastq fastq,121995763.0,560778.0,DMSO 3hpf 3 S2 L001 R2 001.fastq.gz,0:108.73 1:108.82,A:31569811;C:29316325;G:29402755;T:31346545;N:360327,108,108,,,31569811,29316325,29402755,31346545,360327,SRX4644394,SRS3742464,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.96945,0.96871,0.00029,0.00031,0.99924,0.99924,0.3498,0.37356,134,134,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures
48756,SRR7789610,SRX4644393,SRS3742463,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,DMSO 3hpf 4 S3,,strain:5D|isolate:93|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,DMSO 3hpf 4 S3,DMSO 3hpf 4 S3,DMSO 3hpf 4 S3,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,DMSO-3hpf-4_S3_L001_R1_001.fastq.gz DMSO-3hpf-4_S3_L001_R2_001.fastq.gz,fastq fastq,131169421.0,625415.0,DMSO 3hpf 4 S3 L001 R2 001.fastq.gz,0:104.81 1:104.92,A:33973430;C:31403379;G:31490054;T:33651313;N:651245,104,104,,,33973430,31403379,31490054,33651313,651245,SRX4644393,SRS3742463,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.98214,0.98232,0.00039,0.00042,0.99931,0.99928,0.43853,0.43838,94,94,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures
48757,SRR7789611,SRX4644392,SRS3742462,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 3hpf 1 S10,,strain:5D|isolate:94|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 3hpf 1 S10,TDCIPP 3hpf 1 S10,TDCIPP 3hpf 1 S10,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-3hpf-1_S10_L001_R2_001.fastq.gz TDCIPP-3hpf-1_S10_L001_R1_001.fastq.gz,fastq fastq,142472001.0,675614.0,TDCIPP 3hpf 1 S10 L001 R2 001.fastq.gz,0:105.40 1:105.48,A:37237954;C:33780885;G:33866153;T:36894511;N:692498,105,105,,,37237954,33780885,33866153,36894511,692498,SRX4644392,SRS3742462,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.98448,0.98456,3e-05,5e-05,0.99928,0.99926,0.44535,0.45235,89,89,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures
48758,SRR7789612,SRX4644391,SRS3742461,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 3hpf 2 S11,,strain:5D|isolate:95|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 3hpf 2 S11,TDCIPP 3hpf 2 S11,TDCIPP 3hpf 2 S11,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-3hpf-2_S11_L001_R1_001.fastq.gz TDCIPP-3hpf-2_S11_L001_R2_001.fastq.gz,fastq fastq,135473127.0,649900.0,TDCIPP 3hpf 2 S11 L001 R2 001.fastq.gz,0:104.20 1:104.25,A:35005838;C:32424512;G:32538931;T:34827379;N:676467,104,104,,,35005838,32424512,32538931,34827379,676467,SRX4644391,SRS3742461,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.98266,0.98245,0.0,0.0,0.99933,0.99933,0.49436,0.49577,59,59,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures
48759,SRR7789613,SRX4644390,SRS3742460,SRP159670,PRJNA475635,Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis,PRJNA475635,Other,The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.,,,,,TDCIPP 3hpf 4 S12,,strain:5D|isolate:96|dev stage:3 hpf|sex:not applicable|tissue:embryo|BioSampleModel:Model organism or animal,,,,,,,,,TDCIPP 3hpf 4 S12,TDCIPP 3hpf 4 S12,TDCIPP 3hpf 4 S12,Nextera XT DNA Library Prep kit,,,AMPLICON,TRANSCRIPTOMIC,PCR,PAIRED,ILLUMINA,Illumina MiniSeq,,SRP159670,,,TDCIPP-3hpf-4_S12_L001_R1_001.fastq.gz TDCIPP-3hpf-4_S12_L001_R2_001.fastq.gz,fastq fastq,126387362.0,600422.0,TDCIPP 3hpf 4 S12 L001 R1 001.fastq.gz,0:105.21 1:105.28,A:32731869;C:30187130;G:30351165;T:32470755;N:646443,105,105,,,32731869,30187130,30351165,32470755,646443,SRX4644390,SRS3742460,SRA767209,"University of California, Riverside|Environmental Sciences","University of California, Riverside",2,0.97915,0.97875,0.00012,0.00011,0.99933,0.99933,0.44431,0.44577,117,117,B,B,biological fallback assumption,illumina,miseq,unknown,random_priming,nextera,bulk,unknown,unknown,,United States,2018-09-05,Blastula,Embryo,Embryo Imprecise,All anatomical structures