contig_metadata: 602061
This data as json
| rowid | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 602061 | PRJNA630162_P_NODE_24201_length_372_cov_40.631579_g22681_i0 | PRJNA630162 | 24201 | 372 | 40.631579 | 151.14947388 | Protosiphon botryoides | 44656 | Plants | Plants | 660 | 0 | NTclustered | gi|1509778905|gb|MG778499.1| | 44656 | g22681 | i0 | 98.656 | 145.274193548387 | 372 | 5 | 100 | 0 | 1 | 372 | 34041 | 34412 | Protosiphon botryoides ribosomal protein S2 (rps2) gene, complete cds; tRNA-Asp (trnD(guc)) gene, complete sequence; 10 kDa phosphoprotein of photosystem II (psbH), photosystem II protein N (psbN), photosystem II protein T (psbT), and PSII 47 kDa protein (psbB) genes, complete cds; tRNA-Tyr (trnY(gua)) gene, complete sequence; ribosomal protein S11 (rps11), P700 apoprotein A2 of photosystem I (psaB), and RNA polymerase alpha subunit (rpoA) genes, complete cds; tRNA-Met (trnM(cau)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; hypothetical chloroplast RF12 (ycf12) gene, complete cds; tRNA-Ser (trnS(gcu)) gene, complete sequence; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; tRNA-Leu (trnL(uaa)) gene, complete sequence; hypothetical chloroplast RF3 (ycf3), hypothetical chloroplast protein RF4 (ycf4), ribosomal protein S9 (rps9), photosystem II protein V (psbE), ATP synthase CF0 B subunit (atpF), ATP synthase CF0 C subunit (atpH), ATP synthase CF1 epsilon subunit (atpE), ribosomal protein S7 (rps7), ribosomal protein S14 (rps14), M protein of photosystem II (psbM), photosystem II reaction center Z protein (psbZ), and heme attachment to plastid cytochrome c (ccsA) genes, complete cds; 5S ribosomal RNA (rrf), large subunit ribosomal RNA (rrl), tRNA-Ala (trnA(ugc)), tRNA-Ile (trnI(gau)), and small subunit ribosomal RNA (rrs) genes, complete sequence; protochlorophyllide reductase subunit B (chlB) gene, complete cds; tRNA-Arg (trnR(ucu)) gene, complete sequence; cytochrome b6/f complex subunit 4 (petD), apocytochrome f of cytochrome b6/f complex (petA), and RNA polymerase beta' subunit (rpoC1) genes, complete cds; tRNA-Pro (trnP(ugg)) and tRNA-Val (trnV(uac)) genes, complete sequence; translation elongation factor Tu (tufA) gene, complete cds; tRNA-Glu (trnE(uuc)) gene, complete sequence; ribosomal protein L36 (rpl36) and apocytochrome b6 of cytochrome b6/f complex (petB) genes, complete cds; tRNA-His (trnH(gug)) gene, complete sequence; ribosomal protein S12 (rps12), photosystem I subunit IX (psaJ), ATP synthase CF0 A subunit (atpI), and photosystem II reaction center subunit X (psbJ) genes, complete cds; PsaA (psaA) gene, exons 1 and 2 and partial cds; tRNA-Arg (trnR(acg)) and tRNA-Thr (trnT(ugu)) genes, complete sequence; ribosomal protein S19 (rps19), ribosomal protein L2 (rpl2), ribosomal protein L23 (rpl23), chloroplast envelope membrane protein (cemA), photosystem II protein I (psbI), and CF1 alpha subunit of ATP synthase (atpA) genes, complete cds; tRNA-Trp (trnW(cca)) gene, complete sequence; ribosomal protein S4 (rps4) gene, complete cds; tRNA-Gly (trnG(gcc)) and tRNA-Met (trnM(cau)) genes, complete sequence; proteolytic subunit 2 of clp protease (clpP) gene, complete cds; tRNA-Leu (trnL(uag)) gene, complete sequence; ATP-binding subunit of protochlorophyllide reductase (chlL) gene, complete cds; tRNA-Met (trnM(cau)) gene, complete sequence; subunit VI of cytochrome b6/f complex (petL) and photosystem I iron-sulfur center (psaC) genes, complete cds; tRNA-Phe (trnF(gaa)) gene, complete sequence; ribosomal protein L32 (rpl32) gene, partial cds; ribosomal protein L20 (rpl20) gene, complete cds; tRNA-Ser (trnS(uga)) gene, complete sequence; photosystem II protein D2 (psbD) gene, complete cds; tRNA-Asn (trnN(guu)) and tRNA-Cys (trnC(gca)) genes, complete sequence; photosystem II protein K (psbK) gene, complete cds; tRNA-Gly (trnG(ucc)) gene, complete sequence; and CF1 beta subunit of ATP synthase (atpB), cell division protein (ftsH), and PSII 43 kDa protein (psbC) genes, complete cds; chloroplast | blastn | 54042 | 660 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Protosiphonaceae | Protosiphon | Protosiphon botryoides |