contig_metadata: 23297958
This data as json
| rowid | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23297958 | PRJNA1237347_P_NODE_56639_length_978_cov_4.323757_g51334_i0 | PRJNA1237347 | 56639 | 978 | 4.323757 | 42.28634346 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 1616 | 0 | NTclustered | gi|2105780177|gb|OK365097.1| | 2697049 | g51334 | i0 | 99.55 | 102.042944785276 | 888 | 2 | 100 | 2 | 92 | 978 | 25597 | 26483 | Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-LC0285329/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; nucleocapsid phosphoprotein (N) gene, complete cds; and ORF10 protein (ORF10) gene, partial cds | blastn | 99798 | 1616 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum |