contig_metadata: 1878328
This data as json
| rowid | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1878328 | PRJNA630162_P_NODE_32902_length_313_cov_6.219697_g31380_i0 | PRJNA630162 | 32902 | 313 | 6.219697 | 19.46765161 | Chlorosarcina stigmatica | 327050 | Plants | Plants | 316 | 9.4e-82 | NTclustered | gi|1509778138|gb|MG778232.1| | 327050 | g31380 | i0 | 85.304 | 131.274760383387 | 313 | 38 | 98 | 8 | 1 | 307 | 41030 | 41340 | Chlorosarcina stigmatica N protein of photosystem II (psbN), photosystem II protein T (psbT), and photosystem II 47 kDa protein (psbB) genes, complete cds; tRNA-Ser (trnS(gcu)) gene, complete sequence; hypothetical chloroplast RF3 (ycf3), hypothetical chloroplast RF4 (ycf4), ribosomal protein S9 (rps9), and photosystem II protein V (psbE) genes, complete cds; tRNA-Asp (trnD(guc)) gene, complete sequence; ribosomal protein S11 (rps11), ATP synthase CF0 B subunit (atpF), ATP synthase CF0 C subunit (atpH), and RNA polymerase alpha subunit (rpoA) genes, complete cds; tRNA-Met (trnM(cau)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; hypothetical chloroplast RF12 (ycf12), photochlorophyllide reductase subunit N (chlN), RNA polymerase beta subunit protein b (rpoBb), RNA polymerase beta subunit protein a (rpoBa), photosystem II protein VI (psbF), photosystem II protein L (psbL), cytochrome b6/f complex subunit V (petG), ribosomal protein S3 (rps3), and ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) genes, complete cds; 5S ribosomal RNA (rrf), large subunit ribosomal RNA (rrl), tRNA-Ala (trnA(ugc)), tRNA-Ile (trnI(gau)), and small subunit ribosomal RNA (rrs) genes, complete sequence; chloroplast envelope membrane protein (cemA), ribosomal protein L5 (rpl5), ribosomal protein L14 (rpl14), ribosomal protein L16 (rpl16), hypothetical chloroplast RF1 (ycf1), ribosomal protein S12 (rps12), photosystem I subunit IX (psaJ), ATP synthase CF0 A subunit (atpI), and photosystem II reaction center protein J (psbJ) genes, complete cds; PsaA (psaA) gene, exon 2 and partial cds; photosystem II protein D2 (psbD) gene, complete cds; tRNA-Met (trnM(cau)) and tRNA-Asn (trnN(guu)) genes, complete sequence; cytochrome b6/f complex subunit VI (petL) and photosystem I subunit VII (psaC) genes, complete cds; tRNA-His (trnH(gug)) gene, complete sequence; PSII 43 kDa protein (psbC) and translation elongation factor Tu (tufA) genes, complete cds; tRNA-Pro (trnP(ugg)) and tRNA-Val (trnV(uac)) genes, complete sequence; hypothetical protein, cell division protein (ftsH), ribosomal protein L20 (rpl20), ribosomal protein S4 (rps4), and ATP synthase CF1 beta subunit (atpB) genes, complete cds; tRNA-Ser (trnS(uga)) gene, complete sequence; apocytochrome f of cytochrome b6/f complex (petA) and cytochrome b6/f complex subunit IV (petD) genes, complete cds; tRNA-Arg (trnR(ucu)) gene, complete sequence; apocytochrome b6 of cytochrome b6/f complex (petB), photochlorophyllide reductase subunit L (chlL), and ribosomal protein L36 (rpl36) genes, complete cds; tRNA-Thr (trnT(ugu)) and tRNA-Arg (trnR(acg)) genes, complete sequence; and protochlorophyllide reductase subunit B (chlB) gene, complete cds; chloroplast | blastn | 41089 | 316 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlorosarcinales | Chlorosarcinaceae | Chlorosarcina | Chlorosarcina stigmatica |