rowid,query,bioproject,node,length,coverage,rel_abundance,taxname_lca,taxid_lca,taxoncategory,taxoncategorysimple,bits,evalue,lowcoverage_flag,analysis_used,target,taxid,gene,allele,pident,sumperc_cov,alnlen,mismatch,qcov,gapopen,qstart,qend,tstart,tend,target_title,analysis,sumalnlen,maxbits,bits_percmax,tax_superkingdom,tax_clade,tax_kingdom,tax_phylum,tax_class,tax_order,tax_family,tax_genus,tax_species
144888,PRJEB8827_P_NODE_1861_length_185_cov_6.096154_g1839_i0,PRJEB8827,1861,185,6.096154,11.2778849,Lentivirus humimdef1,3418650,Viruses,Viruses,200,5.329999999999998e-47,,NTclustered,gi|1328390092|gb|MG197093.1|,11676,g1839,i0,88.69,91.2810810810811,168,13,91,5,18,185,6952,6791,"HIV-1 isolate 505_1730a.WG05 from USA nonfunctional gag protein (gag) gene, complete sequence; pol protein (pol) gene, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), and vpu protein (vpu) genes, complete cds; nonfunctional envelope glycoprotein (env) gene, complete sequence; and nef protein (nef) gene, complete cds",blastn,16887,200,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
5247647,PRJEB8827_P_NODE_145_length_384_cov_4.630986_g125_i0,PRJEB8827,145,384,4.630986,17.78298624,Lentivirus humimdef1,3418650,Viruses,Viruses,558,1.77e-154,,NTclustered,gi|30794654|gb|AY247222.1|,11676,g125,i0,97.546,84.4270833333333,326,8,85,0,1,326,70,395,"HIV-1 isolate 81NY1 from USA envelope glycoprotein (env) gene, complete cds",blastn,32420,558,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
11623464,PRJEB8827_P_NODE_190_length_359_cov_2.193939_g168_i0,PRJEB8827,190,359,2.193939,7.87624101,Lentivirus humimdef1,3418650,Viruses,Viruses,510,4.67e-140,,NTclustered,gi|487384|gb|U08973.1|HIV1U08973,11676,g168,i0,92.877,98.4373259052925,351,25,98,0,7,357,605,255,"Human immunodeficiency virus type 1 clone RJIO1-10 envelope glycoprotein (env) gene, partial cds",blastn,35339,510,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
12898535,PRJEB8827_P_NODE_2111_length_178_cov_1.422819_g2089_i0,PRJEB8827,2111,178,1.422819,2.53261782,Lentivirus humimdef1,3418650,Viruses,Viruses,279,6.35e-71,,NTclustered,gi|334302562|gb|JF494950.1|,11676,g2089,i0,94.944,100.005617977528,178,9,100,0,1,178,167,344,"HIV-1 isolate 94-645 from Argentina vif protein (vif) gene, complete cds",blastn,17801,279,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
12898541,PRJEB8827_P_NODE_651_length_250_cov_1.497738_g629_i0,PRJEB8827,651,250,1.497738,3.744345,Lentivirus humimdef1,3418650,Viruses,Viruses,351,1.99e-92,,NTclustered,gi|6466838|gb|AF184155.1|,11676,g629,i0,92,99.276,250,20,100,0,1,250,4728,4479,HIV-1 G829 from Ghana complete genome,blastn,24819,351,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
15447602,PRJEB8827_P_NODE_793_length_237_cov_1.283654_g771_i0,PRJEB8827,793,237,1.283654,3.04225998,Lentivirus humimdef1,3418650,Viruses,Viruses,276,1.16e-69,,NTclustered,gi|1351110346|gb|MG756491.1|,11676,g771,i0,87.866,86.8059071729958,239,24,99,4,1,235,325,88,"HIV-1 isolate B_CH-2015_MP035_BLOOD_R4_C97_S0015_C0064 nonfunctional envelope glycoprotein (env) gene, partial sequence",blastn,20573,276,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
21821713,PRJEB8827_P_NODE_1498_length_198_cov_1.142012_g1476_i0,PRJEB8827,1498,198,1.142012,2.26118376,Lentivirus humimdef1,3418650,Viruses,Viruses,289,1.1999999999999999e-73,,NTclustered,gi|408721024|gb|JQ269217.1|,11676,g1476,i0,92.929,99.9949494949495,198,14,100,0,1,198,540,737,"HIV-1 isolate 10SYD4-9178 from South Korea vif protein (vif) and vpr protein (vpr) genes, complete cds; and tat protein (tat) gene, partial cds",blastn,19799,289,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
24370762,PRJEB8827_P_NODE_3520_length_157_cov_1.210938_g3498_i0,PRJEB8827,3520,157,1.210938,1.90117266,Lentivirus humimdef1,3418650,Viruses,Viruses,248,1.54e-61,,NTclustered,gi|294722519|gb|GQ433069.1|,11676,g3498,i0,95.484,98.8662420382166,155,7,99,0,3,157,515,361,"HIV-1 clone CMNYU124(9)34 from Cameroon pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; and tat protein (tat), rev protein (rev), vpu protein (vpu), and envelope glycoprotein (env) genes, partial cds",blastn,15522,248,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530199,PRJEB8827g_S_NODE_1313_length_267_cov_1.551724_g1292_i0,PRJEB8827,1313,267,1.551724,4.14310308,Human immunodeficiency virus 1,11676,Viruses,Viruses,241,4.86e-59,,NTclustered,gi|190351833|gb|EU744003.1|,11676,g1292,i0,83.275,87.5056179775281,287,23,100,16,1,267,644,363,"HIV-1 isolate H1.46.5B3 from Netherlands envelope glycoprotein (env) gene, complete cds",blastn,23364,241,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530205,PRJEB8827g_S_NODE_1529_length_251_cov_11.097222_g1508_i0,PRJEB8827,1529,251,11.097222,27.85402722,Human immunodeficiency virus 1,11676,Viruses,Viruses,392,1.18e-104,,NTclustered,gi|34765781|gb|AY371716.1|,11676,g1508,i0,94.821,99.9043824701195,251,13,100,0,1,251,141,391,"HIV-1 isolate 00CMNYU4115 from Cameroon gag protein (gag) gene, partial cds",blastn,25076,392,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530211,PRJEB8827g_S_NODE_169_length_576_cov_13.913124_g154_i0,PRJEB8827,169,576,13.913124,80.13959424,Human immunodeficiency virus 1,11676,Viruses,Viruses,575,2.7299999999999995e-159,,NTclustered,gi|11124940|emb|AJ404110.1|,11676,g154,i0,85.484,99.8454861111111,558,73,96,5,23,576,1,554,"Human immunodeficiency virus type 1 proviral partial env gene for envelope glycoprotein gp120, strain A_97DC.KS7",blastn,57511,575,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530214,PRJEB8827g_S_NODE_1777_length_236_cov_4.641791_g1756_i0,PRJEB8827,1777,236,4.6417909999999996,10.95462676,Human immunodeficiency virus 1,11676,Viruses,Viruses,364,2.39e-96,,NTclustered,gi|1219409794|gb|KY797500.1|,11676,g1756,i0,94.468,99.3898305084746,235,13,99,0,1,235,235,1,"HIV-1 isolate EPM_3691 from Brazil vif protein (vif), pol protein (pol), and vpr protein (vpr) genes, partial cds",blastn,23456,364,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530216,PRJEB8827g_S_NODE_1793_length_235_cov_3.590000_g1772_i0,PRJEB8827,1793,235,3.59,8.4365,Human immunodeficiency virus 1,11676,Viruses,Viruses,363,8.569999999999998e-96,,NTclustered,gi|723452984|gb|KM354344.1|,11676,g1772,i0,94.468,100,235,13,100,0,1,235,979,745,"HIV-1 isolate 9024_070808_plasma_25 from USA envelope glycoprotein (env) gene, complete cds",blastn,23500,363,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530217,PRJEB8827g_S_NODE_1809_length_234_cov_11.648241_g1788_i0,PRJEB8827,1809,234,11.648241,27.25688394,Human immunodeficiency virus 1,11676,Viruses,Viruses,346,8.580000000000001e-91,,NTclustered,gi|18463784|gb|AF418847.1|,11676,g1788,i0,93.534,100.179487179487,232,15,99,0,1,232,318,87,"HIV-1 isolate 93USPIC1015ea2 from USA envelope glycoprotein gp120 (env) gene, partial cds",blastn,23442,346,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530221,PRJEB8827g_S_NODE_1905_length_229_cov_9.829897_g1884_i0,PRJEB8827,1905,229,9.829897,22.51046413,Human immunodeficiency virus 1,11676,Viruses,Viruses,313,8.49e-81,,NTclustered,gi|164417628|gb|EU184581.1|,11676,g1884,i0,92.991,93.423580786026207,214,15,93,0,1,214,313,100,"HIV-1 isolate 976v2_2402 from USA nonfunctional envelope glycoprotein (env) gene, partial sequence",blastn,21394,313,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530222,PRJEB8827g_S_NODE_193_length_541_cov_20.723320_g177_i0,PRJEB8827,193,541,20.72332,112.1131612,Human immunodeficiency virus 1,11676,Viruses,Viruses,680,0,,NTclustered,gi|1655447382|gb|MH746233.1|,11676,g177,i0,89.503,99.2513863216266,543,41,100,8,1,541,1672,1144,"HIV-1 isolate S_09_025 from Bulgaria rev protein (rev) and tat protein (tat) genes, partial cds; vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds",blastn,53695,680,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530223,PRJEB8827g_S_NODE_1945_length_227_cov_39.776042_g1924_i0,PRJEB8827,1945,227,39.776042,90.29161534,Human immunodeficiency virus 1,11676,Viruses,Viruses,342,1.07e-89,,NTclustered,gi|920764009|gb|KT283800.1|,11676,g1924,i0,93.86,100.229074889868,228,12,100,2,1,227,1213,1439,"HIV-1 isolate P1031_8.07_10A from USA envelope glycoprotein (env) gene, complete cds",blastn,22752,342,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530227,PRJEB8827g_S_NODE_2137_length_219_cov_2.521739_g2116_i0,PRJEB8827,2137,219,2.521739,5.52260841,Human immunodeficiency virus 1,11676,Viruses,Viruses,283,6.31e-72,,NTclustered,gi|2722331931|gb|PP544645.1|,11676,g2116,i0,90,99.8310502283105,220,20,100,2,1,219,1532,1314,"HIV-1 isolate H11668.34m.A2 from Netherlands vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds; rev protein (rev) and tat protein (tat) genes, partial cds; and nef protein (nef) gene, complete cds",blastn,21863,283,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530232,PRJEB8827g_S_NODE_233_length_495_cov_3.380435_g216_i0,PRJEB8827,233,495,3.380435,16.73315325,Human immunodeficiency virus 1,11676,Viruses,Viruses,710,0,,NTclustered,gi|386306970|gb|JN014343.1|,11676,g216,i0,92.525,100.39595959596,495,37,100,0,1,495,12,506,"HIV-1 isolate ZM53F clone 11 from Zambia gag protein (gag) gene, partial cds",blastn,49696,710,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530235,PRJEB8827g_S_NODE_2425_length_210_cov_3.691429_g2404_i0,PRJEB8827,2425,210,3.691429,7.7520009,Human immunodeficiency virus 1,11676,Viruses,Viruses,344,2.7199999999999998e-90,,NTclustered,gi|2431466170|gb|OP701520.1|,11676,g2404,i0,96.19,100,210,8,100,0,1,210,5113,5322,"HIV-1 isolate PRA009_PB_PD1posCTLA4neg_87 from Australia, complete genome",blastn,21000,344,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530236,PRJEB8827g_S_NODE_2449_length_209_cov_14.919540_g2428_i0,PRJEB8827,2449,209,14.91954,31.1818386,Human immunodeficiency virus 1,11676,Viruses,Viruses,348,2.09e-91,,NTclustered,gi|164416981|gb|EU184230.1|,11676,g2428,i0,96.651,99.9808612440191,209,7,100,0,1,209,638,430,"HIV-1 isolate 892V1_2618 from USA envelope glycoprotein (env) gene, partial cds",blastn,20896,348,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530241,PRJEB8827g_S_NODE_2713_length_203_cov_12.107143_g2692_i0,PRJEB8827,2713,203,12.107143,24.57750029,Human immunodeficiency virus 1,11676,Viruses,Viruses,243,9.78e-60,,NTclustered,gi|2575864301|gb|OR327233.1|,11676,g2692,i0,88.406,102.990147783251,207,16,100,8,1,203,1100,1302,"HIV-1 isolate 93CBG4-18908/14723 from South Korea envelope glycoprotein (env) and nef protein (nef) genes, complete cds",blastn,20907,243,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530242,PRJEB8827g_S_NODE_2801_length_201_cov_4.036145_g2780_i0,PRJEB8827,2801,201,4.036145,8.11265145,Human immunodeficiency virus 1,11676,Viruses,Viruses,289,1.2199999999999998e-73,,NTclustered,gi|1655447035|gb|MK086111.1|,11676,g2780,i0,92.537,100.965174129353,201,15,100,0,1,201,5530,5330,"HIV-1 isolate LB082_1 from Cameroon, partial genome",blastn,20294,289,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530243,PRJEB8827g_S_NODE_3025_length_197_cov_2.487654_g3004_i0,PRJEB8827,3025,197,2.487654,4.9006783799999996,Human immunodeficiency virus 1,11676,Viruses,Viruses,219,1.59e-52,,NTclustered,gi|46946834|gb|AY521630.1|,11676,g3004,i0,87.5,94.741116751269,192,21,97,3,1,191,8241,8052,"HIV-1 isolate DDJ360 from Senegal gag protein (gag) and pol protein (pol) genes, partial cds; vif protein (vif), vpr protein (vpr), and tat protein (tat) genes, complete cds; rev protein-like gene, complete sequence; and vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds",blastn,18664,219,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530247,PRJEB8827g_S_NODE_353_length_425_cov_25.748718_g334_i0,PRJEB8827,353,425,25.748718,109.4320515,Human immunodeficiency virus 1,11676,Viruses,Viruses,747,0,,NTclustered,gi|766625868|gb|KJ704792.1|,11676,g334,i0,98.578,99.3811764705882,422,6,99,0,4,425,1498,1077,"HIV-1 isolate NYC4 from USA, partial genome",blastn,42237,747,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530248,PRJEB8827g_S_NODE_3769_length_186_cov_10.953642_g3748_i0,PRJEB8827,3769,186,10.953642,20.37377412,Human immunodeficiency virus 1,11676,Viruses,Viruses,289,1.11e-73,,NTclustered,gi|1963744883|gb|MT794754.1|,11676,g3748,i0,94.624,100,186,10,100,0,1,186,211,396,"HIV-1 clone MM34.PLAS.SGS.00192.039 from United Kingdom rev protein (rev) and tat protein (tat) genes, partial cds; vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds",blastn,18600,289,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530255,PRJEB8827g_S_NODE_441_length_388_cov_4.237960_g420_i0,PRJEB8827,441,388,4.23796,16.4432848,Human immunodeficiency virus 1,11676,Viruses,Viruses,518,3.04e-142,,NTclustered,gi|60651975|gb|AY835771.1|,11676,g420,i0,90.979,100,388,29,100,1,1,388,6347,5966,"HIV-1 isolate 5082-86 clone pbf26 from USA, complete genome",blastn,38800,518,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530259,PRJEB8827g_S_NODE_537_length_362_cov_41.018349_g516_i0,PRJEB8827,537,362,41.018349,148.48642338,Human immunodeficiency virus 1,11676,Viruses,Viruses,368,2.9999999999999997e-97,,NTclustered,gi|658116633|gb|KJ669940.1|,11676,g516,i0,85.714,99.0414364640884,364,34,96,10,3,348,1446,1083,"HIV-1 isolate M127_27031991_F7 from Netherlands envelope glycoprotein gene, partial cds",blastn,35853,368,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530261,PRJEB8827g_S_NODE_5665_length_173_cov_22.826087_g5644_i0,PRJEB8827,5665,173,22.826087,39.48913051,Human immunodeficiency virus 1,11676,Viruses,Viruses,283,4.729999999999999e-72,,NTclustered,gi|140089867|gb|EF179881.1|,11676,g5644,i0,96.023,102.21387283237,176,4,100,2,1,173,1098,923,"HIV-1 isolate LTNP 5005 clone CL1 from France envelope glylcoprotein (env) gene, partial cds",blastn,17683,283,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530265,PRJEB8827g_S_NODE_5881_length_172_cov_11.343066_g5860_i0,PRJEB8827,5881,172,11.343066,19.51007352,Human immunodeficiency virus 1,11676,Viruses,Viruses,254,3.68e-63,,NTclustered,gi|920764061|gb|KT283826.1|,11676,g5860,i0,93.605,100.441860465116,172,8,100,1,1,172,1267,1099,"HIV-1 isolate P1031_46.1_1A from USA envelope glycoprotein (env) gene, complete cds",blastn,17276,254,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530275,PRJEB8827g_S_NODE_7873_length_165_cov_0.976923_g7852_i0,PRJEB8827,7873,165,0.976923,1.61192295,Human immunodeficiency virus 1,11676,Viruses,Viruses,213,5.98e-51,,NTclustered,gi|313511189|gb|HQ595805.1|,11676,g7852,i0,91.195,92.5454545454545,159,11,95,3,1,157,1343,1186,"HIV-1 isolate T520b_F9 from United Kingdom envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds",blastn,15270,213,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530278,PRJEB8827g_S_NODE_8169_length_164_cov_23.775194_g8148_i0,PRJEB8827,8169,164,23.775194,38.99131816,Human immunodeficiency virus 1,11676,Viruses,Viruses,287,3.45e-73,,NTclustered,gi|1828968767|gb|MT033675.1|,11676,g8148,i0,98.171,99.3414634146341,164,3,100,0,1,164,5478,5315,"HIV-1 isolate 112404_C02 from USA gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; nonfunctional tat protein (tat) gene, complete sequence; and rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds",blastn,16292,287,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530280,PRJEB8827g_S_NODE_897_length_304_cov_4.557621_g876_i0,PRJEB8827,897,304,4.557621,13.85516784,Human immunodeficiency virus 1,11676,Viruses,Viruses,468,2.37e-127,,NTclustered,gi|641387525|gb|KJ528775.1|,11676,g876,i0,94.702,99.3618421052632,302,15,99,1,3,304,112,412,"HIV-1 isolate SHAC89S from USA envelope glycoprotein (env) gene, partial cds",blastn,30206,468,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530282,PRJEB8827g_S_NODE_945_length_298_cov_3.615970_g924_i0,PRJEB8827,945,298,3.61597,10.7755906,Human immunodeficiency virus 1,11676,Viruses,Viruses,370,6.73e-98,,NTclustered,gi|335346845|gb|JN002022.1|,11676,g924,i0,89.262,94.2214765100671,298,29,99,3,1,297,1494,1199,"HIV-1 isolate CB3sc4 from Australia envelope glycoprotein (env) gene, complete cds",blastn,28078,370,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530288,PRJEB8827h_S_NODE_1129_length_282_cov_5.222672_g1110_i0,PRJEB8827,1129,282,5.222672,14.72793504,Human immunodeficiency virus 1,11676,Viruses,Viruses,355,1.7699999999999997e-93,,NTclustered,gi|2672113129|gb|PP155043.1|,11676,g1110,i0,89.399,100.13475177305,283,28,100,2,1,282,1117,836,"HIV-1 isolate NAB078 from India envelope glycoprotein (env) gene, complete cds",blastn,28238,355,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530289,PRJEB8827h_S_NODE_1217_length_275_cov_5.737500_g1198_i0,PRJEB8827,1217,275,5.7375,15.778125,Human immunodeficiency virus 1,11676,Viruses,Viruses,248,3e-61,,NTclustered,gi|443297450|gb|KC187493.1|,11676,g1198,i0,83.813,100.210909090909,278,27,100,15,1,275,582,320,"HIV-1 isolate 4049_Plasma_Visit1_amplicon30 from Malawi envelope glycoprotein (env) gene, complete cds",blastn,27558,248,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530293,PRJEB8827h_S_NODE_1321_length_266_cov_22.935065_g1302_i0,PRJEB8827,1321,266,22.935065,61.0072729,Human immunodeficiency virus 1,11676,Viruses,Viruses,425,1.24e-114,,NTclustered,gi|846121841|gb|KR861271.1|,11676,g1302,i0,95.489,100.781954887218,266,12,100,0,1,266,787,1052,"HIV-1 isolate bcpp_00155_amp2 from Botswana tat protein (tat) gene, partial cds; nonfunctional rev protein (rev) gene, complete sequence; and truncated vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds",blastn,26808,425,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530295,PRJEB8827h_S_NODE_13617_length_187_cov_2.815789_g13598_i0,PRJEB8827,13617,187,2.815789,5.26552543,Human immunodeficiency virus 1,11676,Viruses,Viruses,296,6.7e-76,,NTclustered,gi|1789282432|gb|MK458049.1|,11676,g13598,i0,95.263,91.2780748663102,190,3,98,1,1,184,2732,2921,HIV-1 isolate 074-A-109-1-1_w4_285 from Botswana defective genome,blastn,17069,296,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530302,PRJEB8827h_S_NODE_1489_length_256_cov_3.506787_g1470_i0,PRJEB8827,1489,256,3.506787,8.97737472,Human immunodeficiency virus 1,11676,Viruses,Viruses,372,1.57e-98,,NTclustered,gi|920670073|gb|KR820295.1|,11676,g1470,i0,92.941,98.94921875,255,18,99,0,2,256,5441,5695,"HIV-1 isolate Z331F_15Apr09_PL_NFLG_SGA12 from Zambia gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds",blastn,25331,372,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530310,PRJEB8827h_S_NODE_1793_length_241_cov_10.053398_g1774_i0,PRJEB8827,1793,241,10.053398,24.22868918,Human immunodeficiency virus 1,11676,Viruses,Viruses,292,1.17e-74,,NTclustered,gi|472827311|gb|KC629270.1|,11676,g1774,i0,89.167,99.850622406639,240,19,99,7,4,241,938,704,"HIV-1 isolate RB_332_14R from Botswana envelope glycoprotein (env) gene, partial cds",blastn,24064,292,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530317,PRJEB8827h_S_NODE_209_length_472_cov_10.695652_g190_i0,PRJEB8827,209,472,10.695652,50.48347744,Human immunodeficiency virus 1,11676,Viruses,Viruses,675,0,,NTclustered,gi|12957365|gb|AF325762.1|AF325762,11676,g190,i0,92.585,100.76906779661,472,32,100,2,1,472,1230,762,"HIV-1 isolate TV019-82 from South Africa vif protein (vif) and vpr protein (vpr) genes, complete cds; tat protein (tat) and rev protein (rev) genes, partial cds; and vpu protein (vpu) gene, complete cds",blastn,47563,675,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530324,PRJEB8827h_S_NODE_2401_length_223_cov_29.813830_g2382_i0,PRJEB8827,2401,223,29.81383,66.4848409,Human immunodeficiency virus 1,11676,Viruses,Viruses,348,2.2500000000000002e-91,,NTclustered,gi|1145096|gb|U36139.1|HIV1U36139,11676,g2382,i0,94.69,98.8565022421525,226,9,100,1,1,223,657,432,"Human immunodeficiency virus type 1 sample P5.28-7, envelope glycoprotein (env) gene, C2-V5, partial cds",blastn,22045,348,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530328,PRJEB8827h_S_NODE_2513_length_221_cov_7.510753_g2494_i0,PRJEB8827,2513,221,7.510753,16.59876413,Human immunodeficiency virus 1,11676,Viruses,Viruses,375,1.0199999999999998e-99,,NTclustered,gi|846121841|gb|KR861271.1|,11676,g2494,i0,97.285,101.199095022624,221,6,100,0,1,221,1183,1403,"HIV-1 isolate bcpp_00155_amp2 from Botswana tat protein (tat) gene, partial cds; nonfunctional rev protein (rev) gene, complete sequence; and truncated vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds",blastn,22365,375,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530351,PRJEB8827h_S_NODE_39505_length_166_cov_2.793893_g39486_i0,PRJEB8827,39505,166,2.793893,4.63786238,Human immunodeficiency virus 1,11676,Viruses,Viruses,241,2.76e-59,,NTclustered,gi|846122008|gb|KR861305.1|,11676,g39486,i0,92.771,100.602409638554,166,12,100,0,1,166,1328,1163,"HIV-1 isolate bcpp_00421_amp2 from Botswana tat protein (tat) gene, partial cds; truncated rev protein (rev) gene, complete cds; nonfunctional truncated vpu protein (vpu) and nonfunctional envelope glycoprotein (env) genes, complete sequence; truncated envelope glycoprotein (vpu) gene, complete cds; and nonfunctional truncated nef protein (nef) gene, complete sequence",blastn,16700,241,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530358,PRJEB8827h_S_NODE_433_length_385_cov_4.854286_g414_i0,PRJEB8827,433,385,4.854286,18.6890011,Human immunodeficiency virus 1,11676,Viruses,Viruses,403,8.81e-108,,NTclustered,gi|1527253281|gb|MK205940.1|,11676,g414,i0,85.938,100.335064935065,384,46,99,7,1,383,1349,973,"HIV-1 isolate CAP255_3100_031wpi_12JB from South Africa envelope glycoprotein (env) gene, complete cds",blastn,38629,403,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530367,PRJEB8827h_S_NODE_49929_length_152_cov_7.948718_g49910_i0,PRJEB8827,49929,152,7.948718,12.08205136,Human immunodeficiency virus 1,11676,Viruses,Viruses,176,7.07e-40,,NTclustered,gi|262211541|gb|GU080170.1|,11676,g49910,i0,87.582,101.572368421053,153,17,100,2,1,152,1105,1256,"HIV-1 clone 704MC012F from South Africa env gene, complete sequence",blastn,15439,176,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530373,PRJEB8827h_S_NODE_51449_length_151_cov_1.491379_g51430_i0,PRJEB8827,51449,151,1.491379,2.25198229,Human immunodeficiency virus 1,11676,Viruses,Viruses,241,2.4500000000000008e-59,,NTclustered,gi|2038124600|gb|MW523106.1|,11676,g51430,i0,95.364,97.4304635761589,151,7,100,0,1,151,136,286,"HIV-1 isolate 01KBH3-17532 from South Korea vif protein (vif) and vpr protein (vpr) genes, complete cds; and tat protein (tat) and rev protein (rev) genes, partial cds",blastn,14712,241,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530384,PRJEB8827h_S_NODE_673_length_335_cov_12.540000_g654_i0,PRJEB8827,673,335,12.54,42.009,Human immunodeficiency virus 1,11676,Viruses,Viruses,329,1.3e-85,,NTclustered,gi|1527253287|gb|MK205943.1|,11676,g654,i0,84.615,100.286567164179,338,45,99,7,3,335,973,1308,"HIV-1 isolate CAP255_3100_031wpi_04JB from South Africa envelope glycoprotein (env) gene, complete cds",blastn,33596,329,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25530390,PRJEB8827h_S_NODE_825_length_314_cov_8.648746_g806_i0,PRJEB8827,825,314,8.648746,27.15706244,Human immunodeficiency virus 1,11676,Viruses,Viruses,357,5.56e-94,,NTclustered,gi|49790394|gb|AY635649.1|,11676,g806,i0,88.814,97.0222929936306,295,28,94,4,1,294,611,321,"HIV-1 isolate Binyang-429 from China envelope glycoprotein (env) gene, partial cds",blastn,30465,357,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25617801,PRJEB8827g_S_NODE_577_length_353_cov_11.421384_g556_i0,PRJEB8827,577,353,11.421384,40.31748552,Lentivirus,11646,Viruses,Viruses,558,1.61e-154,,NTclustered,gi|140089922|gb|EF179937.1|,11676,g556,i0,95.198,100.084985835694,354,15,100,2,1,353,432,80,"HIV-1 isolate LTNP 5008 clone CL15 from France envelope glylcoprotein (env) gene, partial cds",blastn,35330,558,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666146,PRJEB8827g_S_NODE_1026_length_290_cov_6.513725_g1005_i0,PRJEB8827,1026,290,6.513725,18.8898025,Human immunodeficiency virus 1,11676,Viruses,Viruses,403,6.44e-108,,NTclustered,gi|328794|gb|L03699.1|HIVTN239,11676,g1005,i0,92.254,96.4068965517241,284,22,98,0,1,284,274,557,"Human immunodeficiency virus type 1 (CM239) envelope glycoprotein (env) gene, 5' end",blastn,27958,403,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666154,PRJEB8827g_S_NODE_122_length_797_cov_3.393701_g113_i0,PRJEB8827,122,797,3.393701,27.04779697,Human immunodeficiency virus 1,11676,Viruses,Viruses,1068,0,,NTclustered,gi|1835285571|gb|MN116205.1|,11676,g113,i0,90.841,99.9573400250941,797,73,100,0,1,797,5578,4782,"HIV-1 isolate CG-0422-02V from Democratic Republic of the Congo, complete genome",blastn,79666,1068,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666157,PRJEB8827g_S_NODE_1322_length_266_cov_6.493506_g1301_i0,PRJEB8827,1322,266,6.493506,17.27272596,Human immunodeficiency virus 1,11676,Viruses,Viruses,322,1.68e-83,,NTclustered,gi|222428502|gb|FJ469738.1|,11676,g1301,i0,88.519,101.033834586466,270,26,100,3,1,266,6643,6375,"HIV-1 isolate L805 from USA gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and envelope glycoprotein (env) and nef protein (nef) genes, complete cds",blastn,26875,322,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666160,PRJEB8827g_S_NODE_13602_length_153_cov_1.940678_g13581_i0,PRJEB8827,13602,153,1.940678,2.96923734,Human immunodeficiency virus 1,11676,Viruses,Viruses,230,5.39e-56,,NTclustered,gi|1780580107|gb|MG729332.1|,11676,g13581,i0,93.464,99.9542483660131,153,10,100,0,1,153,347,499,"HIV-1 isolate HIVVIF058-2016MX from Mexico vif protein (vif) gene, complete cds; and pol protein (pol) and vpr protein (vpr) genes, partial cds",blastn,15293,230,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666165,PRJEB8827g_S_NODE_1490_length_254_cov_8.931507_g1469_i0,PRJEB8827,1490,254,8.931507,22.68602778,Human immunodeficiency virus 1,11676,Viruses,Viruses,327,3.42e-85,,NTclustered,gi|1089680914|gb|KX841776.1|,11676,g1469,i0,93.607,87.7716535433071,219,14,86,0,1,219,401,183,"HIV-1 isolate REA05e_Timepoint1_DNA_23 from Denmark envelope glycoprotein (env) gene, partial cds",blastn,22294,327,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666168,PRJEB8827g_S_NODE_1530_length_251_cov_4.532407_g1509_i0,PRJEB8827,1530,251,4.532407,11.37634157,Human immunodeficiency virus 1,11676,Viruses,Viruses,379,9.189999999999998e-101,,NTclustered,gi|1234177235|gb|MF373167.1|,11676,g1509,i0,95.378,94.9003984063745,238,11,95,0,14,251,1440,1203,"HIV-1 isolate 064GR from Sweden, partial genome",blastn,23820,379,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666169,PRJEB8827g_S_NODE_1546_length_250_cov_11.306977_g1525_i0,PRJEB8827,1546,250,11.306977,28.2674425,Human immunodeficiency virus 1,11676,Viruses,Viruses,357,4.28e-94,,NTclustered,gi|30794658|gb|AY247224.1|,11676,g1525,i0,92.4,99.928,250,19,100,0,1,250,518,767,"HIV-1 isolate 81NY3 from USA envelope glycoprotein (env) gene, complete cds",blastn,24982,357,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666173,PRJEB8827g_S_NODE_162_length_594_cov_4.974955_g148_i0,PRJEB8827,162,594,4.974955,29.5512327,Human immunodeficiency virus 1,11676,Viruses,Viruses,593,7.779999999999998e-165,,NTclustered,gi|158701135|gb|EU164101.1|,11676,g148,i0,85,99.3468013468013,600,72,100,9,1,594,866,279,"HIV-1 isolate QA584.88M.Ev1v5.L from Kenya envelope glycoprotein (env) gene, partial cds",blastn,59012,593,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666175,PRJEB8827g_S_NODE_1682_length_241_cov_16.446602_g1661_i0,PRJEB8827,1682,241,16.446602,39.63631082,Human immunodeficiency virus 1,11676,Viruses,Viruses,405,1.45e-108,,NTclustered,gi|428132866|gb|JX263608.1|,11676,g1661,i0,97.083,99.6597510373444,240,7,99,0,2,241,663,902,"HIV-1 isolate YNLC09R216 from China gag protein (gag) gene, partial cds",blastn,24018,405,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666177,PRJEB8827g_S_NODE_1722_length_239_cov_2.970588_g1701_i0,PRJEB8827,1722,239,2.970588,7.09970532,Human immunodeficiency virus 1,11676,Viruses,Viruses,372,1.45e-98,,NTclustered,gi|386877703|gb|JQ902462.1|,11676,g1701,i0,95.299,98.7615062761506,234,11,98,0,6,239,235,2,"HIV-1 isolate H18855_9S2 from Netherlands envelope glycoprotein gene, partial cds",blastn,23604,372,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666178,PRJEB8827g_S_NODE_1778_length_236_cov_4.512438_g1757_i0,PRJEB8827,1778,236,4.512438,10.64935368,Human immunodeficiency virus 1,11676,Viruses,Viruses,351,1.86e-92,,NTclustered,gi|1798179644|gb|MN695004.1|,11676,g1757,i0,94.323,99.5550847457627,229,13,97,0,2,230,4697,4469,"HIV-1 isolate G115399 from Uganda gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; tat protein (tat) and rev protein (rev) genes, partial cds; nonfunctional vpu protein (vpu) gene, complete sequence; and envelope glycoprotein (env) gene, partial cds",blastn,23495,351,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666180,PRJEB8827g_S_NODE_1810_length_234_cov_9.633166_g1789_i0,PRJEB8827,1810,234,9.633166,22.54160844,Human immunodeficiency virus 1,11676,Viruses,Viruses,322,1.45e-83,,NTclustered,gi|2104546236|gb|MZ344733.1|,11676,g1789,i0,91.453,100.303418803419,234,20,100,0,1,234,332,99,"HIV-1 strain CITN_003_C04D01_EM10_7 from USA envelope glycoprotein (env) gene, partial cds",blastn,23471,322,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666185,PRJEB8827g_S_NODE_1986_length_225_cov_4.842105_g1965_i0,PRJEB8827,1986,225,4.842105,10.89473625,Human immunodeficiency virus 1,11676,Viruses,Viruses,296,8.37e-76,,NTclustered,gi|1009520724|gb|KU685592.1|,11676,g1965,i0,90.393,98.4711111111111,229,16,99,1,3,225,513,741,"HIV-1 isolate EUR-0033 from Spain gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds",blastn,22156,296,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666187,PRJEB8827g_S_NODE_2034_length_223_cov_19.063830_g2013_i0,PRJEB8827,2034,223,19.06383,42.5123409,Human immunodeficiency virus,12721,Viruses,Viruses,315,2.29e-81,,NTclustered,gi|564474690|gb|KC595160.1|,12721,g2013,i0,92.07,102.273542600897,227,13,100,5,1,223,274,499,"Human immunodeficiency virus isolate 3227050_2Fc1 envelope glycoprotein (env) gene, complete cds",blastn,22807,315,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Human immunodeficiency virus
25666188,PRJEB8827g_S_NODE_2090_length_221_cov_3.145161_g2069_i0,PRJEB8827,2090,221,3.145161,6.95080581,Human immunodeficiency virus 1,11676,Viruses,Viruses,320,4.86e-83,,NTclustered,gi|38491800|gb|AY371156.1|,11676,g2069,i0,92.76,100.570135746606,221,16,100,0,1,221,5198,5418,"HIV-1 isolate 01CM.0175BA from Cameroon gag protein (gag) and pol protein (pol) genes, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds",blastn,22226,320,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666190,PRJEB8827g_S_NODE_218_length_509_cov_10.848101_g202_i0,PRJEB8827,218,509,10.848101,55.21683409,Human immunodeficiency virus 1,11676,Viruses,Viruses,555,3.109999999999999e-153,,NTclustered,gi|1036307246|gb|KX168073.1|,11676,g202,i0,86.68,102.080550098232,518,48,100,15,1,509,656,151,"HIV-1 isolate MF520.W14M.C2 from Kenya envelope glycoprotein (env) gene, complete cds",blastn,51959,555,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666199,PRJEB8827g_S_NODE_2450_length_209_cov_9.660920_g2429_i0,PRJEB8827,2450,209,9.66092,20.1913228,Human immunodeficiency virus 1,11676,Viruses,Viruses,331,2.1e-86,,NTclustered,gi|310877667|gb|HQ110664.1|,11676,g2429,i0,95.215,99.9473684210526,209,10,100,0,1,209,1056,848,"HIV-1 clone 1989b2 from USA envelope glycoprotein (env) gene, complete cds",blastn,20889,331,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666200,PRJEB8827g_S_NODE_2714_length_203_cov_8.625000_g2693_i0,PRJEB8827,2714,203,8.625,17.50875,Human immunodeficiency virus 1,11676,Viruses,Viruses,348,2.0100000000000006e-91,,NTclustered,gi|1351110378|gb|MG756523.1|,11676,g2693,i0,97.537,100.12807881773401,203,5,100,0,1,203,635,433,"HIV-1 isolate B_CH-2015_MP035_BLOOD_X3_C97_S0014_C0022 nonfunctional envelope glycoprotein (env) gene, partial sequence",blastn,20326,348,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666209,PRJEB8827g_S_NODE_338_length_429_cov_6.802030_g319_i0,PRJEB8827,338,429,6.80203,29.1807087,Human immunodeficiency virus 1,11676,Viruses,Viruses,545,1.56e-150,,NTclustered,gi|300510728|gb|GU471633.1|,11676,g319,i0,95.087,91.9020979020979,346,17,81,0,65,410,346,1,"HIV-1 isolate C4-09 from Switzerland envelope glycoprotein (env) gene, partial cds",blastn,39426,545,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666210,PRJEB8827g_S_NODE_354_length_425_cov_21.397436_g335_i0,PRJEB8827,354,425,21.397436,90.939103,Human immunodeficiency virus 1,11676,Viruses,Viruses,713,0,,NTclustered,gi|1732595154|gb|MK548808.1|,11676,g335,i0,96.941,99.4470588235294,425,13,100,0,1,425,1107,1531,"HIV-1 isolate 92CNS5-16662 from South Korea gag protein gene, complete cds",blastn,42265,713,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666213,PRJEB8827g_S_NODE_3786_length_186_cov_1.139073_g3765_i0,PRJEB8827,3786,186,1.139073,2.11867578,Human immunodeficiency virus 1,11676,Viruses,Viruses,291,3.1e-74,,NTclustered,gi|56609023|gb|AY838748.1|,11676,g3765,i0,95.58,98.3333333333333,181,8,97,0,6,186,543,363,"HIV-1 isolate 272M from South Africa nef protein (nef) gene, partial cds",blastn,18290,291,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666215,PRJEB8827g_S_NODE_4218_length_182_cov_1.639456_g4197_i0,PRJEB8827,4218,182,1.639456,2.98380992,Human immunodeficiency virus 1,11676,Viruses,Viruses,276,8.440000000000001e-70,,NTclustered,gi|525645442|gb|KC807955.1|,11676,g4197,i0,94.413,98.9175824175824,179,10,98,0,3,181,2104,2282,"HIV-1 isolate CNXJ09466 clone R3 from China envelope glycoprotein (env) gene, complete cds",blastn,18003,276,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666220,PRJEB8827g_S_NODE_514_length_368_cov_51.216216_g493_i0,PRJEB8827,514,368,51.216216,188.47567488,Human immunodeficiency virus 1,11676,Viruses,Viruses,433,1.0699999999999999e-116,,NTclustered,gi|769793924|gb|KM082110.1|,11676,g493,i0,88.235,100.766304347826,374,29,100,9,1,368,1629,1265,"HIV-1 isolate 1853DNAPBMC22JUN2011.P6M18 from USA vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds",blastn,37082,433,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666222,PRJEB8827g_S_NODE_570_length_354_cov_14.203762_g549_i0,PRJEB8827,570,354,14.203762,50.28131748,Human immunodeficiency virus 1,11676,Viruses,Viruses,399,1.0399999999999998e-106,,NTclustered,gi|83854080|gb|DQ313246.1|,11676,g549,i0,87.784,102.169491525424,352,29,99,6,4,354,612,274,"HIV-1 strain MACS4(4/116) from USA envelope glycoprotein (env) gene, complete cds",blastn,36168,399,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666224,PRJEB8827g_S_NODE_650_length_340_cov_5.924590_g629_i0,PRJEB8827,650,340,5.92459,20.143606,Human immunodeficiency virus 1,11676,Viruses,Viruses,540,5.6199999999999996e-149,,NTclustered,gi|114801551|gb|DQ854075.1|,11676,g629,i0,95.294,100.105882352941,340,16,100,0,1,340,425,86,"HIV-1 isolate 14259.1 from USA vpr protein (vpr) gene, complete cds; and tat protein (tat) gene, partial cds",blastn,34036,540,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666225,PRJEB8827g_S_NODE_6626_length_169_cov_6.574627_g6605_i0,PRJEB8827,6626,169,6.5746270000000004,11.11111963,Human immunodeficiency virus 1,11676,Viruses,Viruses,285,1.28e-72,,NTclustered,gi|1560001327|gb|MK169789.1|,11676,g6605,i0,97.041,100,169,5,100,0,1,169,846,1014,"HIV-1 isolate 120-LN-69H4 from USA, partial genome",blastn,16900,285,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666229,PRJEB8827g_S_NODE_7538_length_166_cov_2.396947_g7517_i0,PRJEB8827,7538,166,2.396947,3.97893202,Human immunodeficiency virus 1,11676,Viruses,Viruses,278,2.11e-70,,NTclustered,gi|353082556|gb|JF960074.1|,11676,g7517,i0,96.97,99.9096385542169,165,5,99,0,2,166,349,185,"HIV-1 isolate ZPHI194-01 from Switzerland envelope glycoprotein (env) gene, partial cds",blastn,16585,278,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666238,PRJEB8827g_S_NODE_8930_length_162_cov_2.188976_g8909_i0,PRJEB8827,8930,162,2.188976,3.54614112,Human immunodeficiency virus 1,11676,Viruses,Viruses,259,7.400000000000001e-65,,NTclustered,gi|1131387712|gb|KX907351.1|,11676,g8909,i0,95.652,100,161,7,99,0,2,162,5719,5559,"HIV-1 isolate CO0778V2 from Tanzania, partial genome",blastn,16200,259,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666239,PRJEB8827g_S_NODE_898_length_304_cov_4.368030_g877_i0,PRJEB8827,898,304,4.36803,13.2788112,Human immunodeficiency virus 1,11676,Viruses,Viruses,468,2.37e-127,,NTclustered,gi|294722089|gb|GQ433014.1|,11676,g877,i0,94.426,100.5,305,16,100,1,1,304,1244,940,"HIV-1 clone CMNYU6544(12)22 from Cameroon pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; and tat protein (tat), rev protein (rev), vpu protein (vpu), and envelope glycoprotein (env) genes, partial cds",blastn,30552,468,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666241,PRJEB8827g_S_NODE_922_length_301_cov_28.255639_g901_i0,PRJEB8827,922,301,28.255639,85.04947339,Human immunodeficiency virus 1,11676,Viruses,Viruses,484,2.3299999999999996e-132,,NTclustered,gi|407732745|gb|JX446812.1|,11676,g901,i0,95.681,99.9601328903654,301,13,100,0,1,301,990,690,"HIV-1 isolate AA011a02L from Thailand gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif) and vpr protein (vpr) genes, complete cds",blastn,30088,484,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666243,PRJEB8827h_S_NODE_1050_length_289_cov_3.653543_g1031_i0,PRJEB8827,1050,289,3.653543,10.55873927,Human immunodeficiency virus 1,11676,Viruses,Viruses,405,1.78e-108,,NTclustered,gi|339642282|gb|HQ657530.1|,11676,g1031,i0,92.096,100.342560553633,291,18,99,3,1,287,311,22,"HIV-1 isolate 22271 from Taiwan envelope glycoprotein (env) gene, partial cds",blastn,28999,405,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666245,PRJEB8827h_S_NODE_114_length_549_cov_5.035019_g96_i0,PRJEB8827,114,549,5.035019,27.64225431,Human immunodeficiency virus 1,11676,Viruses,Viruses,815,0,,NTclustered,gi|255739164|gb|FJ606180.1|,11676,g96,i0,93.443,99.896174863388,549,36,100,0,1,549,1296,748,"HIV-1 isolate ZM132F from Zambia gag protein (gag) gene, complete cds",blastn,54843,815,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666252,PRJEB8827h_S_NODE_1322_length_266_cov_20.017316_g1303_i0,PRJEB8827,1322,266,20.017316,53.24606056,Human immunodeficiency virus 1,11676,Viruses,Viruses,416,7.489999999999999e-112,,NTclustered,gi|316937987|gb|GU329415.1|,11676,g1303,i0,94.796,100.860902255639,269,11,100,3,1,266,1061,793,"HIV-1 isolate 1 from Zambia envelope glycoprotein (env) gene, complete cds",blastn,26829,416,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666256,PRJEB8827h_S_NODE_13618_length_187_cov_2.717105_g13599_i0,PRJEB8827,13618,187,2.717105,5.08098635,Human immunodeficiency virus 1,11676,Viruses,Viruses,248,1.9e-61,,NTclustered,gi|56199259|gb|AY621432.1|,11676,g13599,i0,90.426,100.577540106952,188,16,100,2,1,187,321,135,"HIV-1 isolate M6 envelope glycoprotein (env) gene, partial cds",blastn,18808,248,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666272,PRJEB8827h_S_NODE_2306_length_225_cov_6.357895_g2287_i0,PRJEB8827,2306,225,6.357895,14.30526375,Human immunodeficiency virus 1,11676,Viruses,Viruses,250,6.6099999999999996e-62,,NTclustered,gi|316937827|gb|GU329329.1|,11676,g2287,i0,88.095,93.7511111111111,210,25,93,0,3,212,576,785,"HIV-1 isolate 48 from Zambia envelope glycoprotein (env) gene, complete cds",blastn,21094,250,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666273,PRJEB8827h_S_NODE_2362_length_224_cov_1.973545_g2343_i0,PRJEB8827,2362,224,1.973545,4.4207408,Human immunodeficiency virus 1,11676,Viruses,Viruses,265,2.35e-66,,NTclustered,gi|163637173|gb|EU272216.1|,11676,g2343,i0,90.863,89.5758928571429,197,18,88,0,28,224,379,183,"HIV-1 clone 1006 from China envelope glycoprotein (env) gene, partial cds",blastn,20065,265,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666279,PRJEB8827h_S_NODE_2626_length_219_cov_16.673913_g2607_i0,PRJEB8827,2626,219,16.673913,36.51586947,Human immunodeficiency virus 1,11676,Viruses,Viruses,279,8.16e-71,,NTclustered,gi|339718095|gb|JN108092.1|,11676,g2607,i0,90,101.077625570776,220,17,100,5,1,219,913,698,"HIV-1 isolate 1468MD3_MW_C_02 from Malawi envelope glycoprotein (env) gene, partial cds",blastn,22136,279,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666284,PRJEB8827h_S_NODE_27850_length_177_cov_1.401408_g27831_i0,PRJEB8827,27850,177,1.401408,2.48049216,Human immunodeficiency virus 1,11676,Viruses,Viruses,207,3.02e-49,,NTclustered,gi|80971977|gb|DQ187024.1|,11676,g27831,i0,87.64,99.593220338983,178,20,100,2,1,177,1,177,"HIV-1 isolate MB201.P32M.E13.v1v2 from Kenya envelope glycoprotein (env) gene, partial cds",blastn,17628,207,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666287,PRJEB8827h_S_NODE_2946_length_215_cov_2.772222_g2927_i0,PRJEB8827,2946,215,2.772222,5.9602772999999996,Human immunodeficiency virus 1,11676,Viruses,Viruses,359,9.969999999999999e-95,,NTclustered,gi|354720631|gb|JF680931.1|,11676,g2927,i0,98.058,97.5906976744186,206,4,96,0,1,206,1469,1264,"HIV-1 isolate P430.p3 nonfunctional env protein (env) gene, complete sequence; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds",blastn,20982,359,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666303,PRJEB8827h_S_NODE_40250_length_165_cov_2.346154_g40231_i0,PRJEB8827,40250,165,2.346154,3.8711541,Human immunodeficiency virus 1,11676,Viruses,Viruses,270,3.4999999999999993e-68,,NTclustered,gi|13569287|gb|AF286231.1|AF286231,11676,g40231,i0,96.341,99.2424242424242,164,6,99,0,2,165,4642,4479,"HIV-1 strain 98IN012 from India, complete genome",blastn,16375,270,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666304,PRJEB8827h_S_NODE_40266_length_165_cov_1.184615_g40247_i0,PRJEB8827,40266,165,1.184615,1.95461475,Human immunodeficiency virus 1,11676,Viruses,Viruses,276,7.52e-70,,NTclustered,gi|846121800|gb|KR861263.1|,11676,g40247,i0,96.97,99.9636363636364,165,4,100,1,1,165,233,70,"HIV-1 isolate bcpp_00069_amp2 from Botswana tat protein (tat) gene, partial cds; truncated rev protein (rev) and vpu protein (vpu) genes, complete cds; nonfunctional envelope glycoprotein (env) gene, complete sequence; and truncated envelope glycoprotein (vpu) and truncated nef protein (nef) genes, complete cds",blastn,16494,276,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666310,PRJEB8827h_S_NODE_42802_length_160_cov_18.120000_g42783_i0,PRJEB8827,42802,160,18.12,28.992,Human immunodeficiency virus 1,11676,Viruses,Viruses,174,2.71e-39,,NTclustered,gi|396076501|gb|JX239391.1|,11676,g42783,i0,86.42,102.24375,162,18,100,4,1,160,1118,1277,"HIV-1 isolate ZM282M_12APR06_PL1 from Zambia envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds",blastn,16359,174,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666327,PRJEB8827h_S_NODE_49930_length_152_cov_6.974359_g49911_i0,PRJEB8827,49930,152,6.974359,10.60102568,Human immunodeficiency virus 1,11676,Viruses,Viruses,161,1.98e-35,,NTclustered,gi|2165743884|gb|OK513965.1|,11676,g49911,i0,95.098,69.7039473684211,102,5,67,0,2,103,1604,1503,"HIV-1 isolate 111B from Uganda envelope glycoprotein (env) gene, partial cds",blastn,10595,161,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666333,PRJEB8827h_S_NODE_53538_length_150_cov_1.086957_g53519_i0,PRJEB8827,53538,150,1.086957,1.6304355,Human immunodeficiency virus 1,11676,Viruses,Viruses,261,1.86e-65,,NTclustered,gi|2599479467|gb|OR582087.1|,11676,g53519,i0,98,96.5933333333333,150,3,100,0,1,150,1406,1257,"HIV-1 isolate GRT144 from Switzerland pol protein (pol) gene, partial cds",blastn,14489,261,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666336,PRJEB8827h_S_NODE_626_length_342_cov_39.133550_g607_i0,PRJEB8827,626,342,39.13355,133.836741,Human immunodeficiency virus 1,11676,Viruses,Viruses,381,3.629999999999999e-101,,NTclustered,gi|325966672|gb|HM070659.1|,11676,g607,i0,86.969,101.324561403509,353,29,99,12,1,340,1151,1499,"HIV-1 isolate 3902bmL_F2 from Malawi envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds",blastn,34653,381,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666341,PRJEB8827h_S_NODE_818_length_315_cov_7.110714_g799_i0,PRJEB8827,818,315,7.110714,22.3987491,Human immunodeficiency virus 1,11676,Viruses,Viruses,499,8.76e-137,,NTclustered,gi|334190632|gb|JF722874.1|,11676,g799,i0,95.238,99.8126984126984,315,15,100,0,1,315,632,946,"HIV-1 isolate 1702M_04 from Malawi envelope glycoprotein (env) and vpu protein (vpu) genes, partial cds",blastn,31441,499,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25666345,PRJEB8827h_S_NODE_922_length_300_cov_12.475472_g903_i0,PRJEB8827,922,300,12.475472,37.426416,Human immunodeficiency virus 1,11676,Viruses,Viruses,357,5.28e-94,,NTclustered,gi|2250211769|gb|ON157031.1|,11676,g903,i0,89.347,99.6933333333333,291,22,97,4,10,300,1599,1318,"HIV-1 isolate in1813-1 from China envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds",blastn,29908,357,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25753824,PRJEB8827d_S_NODE_410_length_285_cov_5034.676000_g406_i0,PRJEB8827,410,285,5034.676,14348.8266,Viruses,10239,Viruses,Viruses,108,5.54e-19,,NTclustered,gi|2859928216|gb|PQ511684.1|,11676,g406,i0,98.361,22.5719298245614,61,1,21,0,225,285,9468,9528,"HIV-1 isolate GB1LV100191 from USA, complete genome",blastn,6433,108,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25754029,PRJEB8827g_S_NODE_2962_length_198_cov_2.539877_g2941_i0,PRJEB8827,2962,198,2.539877,5.02895646,Lentivirus,11646,Viruses,Viruses,327,2.55e-85,,NTclustered,gi|14289982|gb|AF377954.1|,11676,g2941,i0,96.465,99.9848484848485,198,7,100,0,1,198,4774,4577,"HIV-1 isolate CM52885 from Cameroon gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds",blastn,19797,327,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
25802306,PRJEB8827g_S_NODE_10267_length_159_cov_3.145161_g10246_i0,PRJEB8827,10267,159,3.145161,5.00080599,Human immunodeficiency virus 1,11676,Viruses,Viruses,222,9.479999999999999e-54,,NTclustered,gi|157778984|gb|EU023924.1|,11676,g10246,i0,94.444,93.5094339622642,144,8,91,0,16,159,567,424,"HIV-1 isolate NAB6pre-cl_8 from Switzerland vpu protein (vpu) gene, complete cds; and envelope glycoprotein (env) gene, partial cds",blastn,14868,222,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1