rowid,query,bioproject,node,length,coverage,rel_abundance,taxname_lca,taxid_lca,taxoncategory,taxoncategorysimple,bits,evalue,lowcoverage_flag,analysis_used,target,taxid,gene,allele,pident,sumperc_cov,alnlen,mismatch,qcov,gapopen,qstart,qend,tstart,tend,target_title,analysis,sumalnlen,maxbits,bits_percmax,tax_superkingdom,tax_clade,tax_kingdom,tax_phylum,tax_class,tax_order,tax_family,tax_genus,tax_species
20863,PRJEB12982_P_NODE_11921_length_204_cov_0.890323_g11758_i0,PRJEB12982,11921,204,0.890323,1.81625892,Lentivirus humimdef1,3418650,Viruses,Viruses,305,1.24e-78,,NTclustered,gi|1798179464|gb|MN694982.1|,11676,g11758,i0,93.627,94.8725490196078,204,13,100,0,1,204,1114,1317,"HIV-1 isolate C115329 from Uganda gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; tat protein (tat) and rev protein (rev) genes, partial cds; vpu protein (vpu) gene, complete cds; and envelope glycoprotein (env) gene, partial cds",blastn,19354,305,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
21080,PRJEB12982_P_NODE_7681_length_261_cov_1.141509_g7518_i0,PRJEB12982,7681,261,1.141509,2.97933849,Lentivirus humimdef1,3418650,Viruses,Viruses,372,1.61e-98,,NTclustered,gi|920764021|gb|KT283806.1|,11676,g7518,i0,92.366,100.463601532567,262,18,100,2,1,261,989,1249,"HIV-1 isolate P1031_8.07_7A from USA envelope glycoprotein (env) gene, complete cds",blastn,26221,372,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
55900,PRJEB3118_S_NODE_121_length_553_cov_25216.581081_g108_i0,PRJEB3118,121,553,25216.581081,139447.69337793,Lentivirus humimdef1,3418650,Viruses,Viruses,91.6,1.15e-13,,NTclustered,gi|2859928216|gb|PQ511684.1|,11676,g108,i0,98.077,9.77034358047016,52,1,9,0,502,553,9463,9514,"HIV-1 isolate GB1LV100191 from USA, complete genome",blastn,5403,91.6,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
55901,PRJEB3118_S_NODE_1221_length_277_cov_52943.495868_g1186_i0,PRJEB3118,1221,277,52943.495868,146653.48355436,Lentivirus humimdef1,3418650,Viruses,Viruses,91.6,5.4e-14,,NTclustered,gi|2859928216|gb|PQ511684.1|,11676,g1186,i0,98.077,19.3393501805054,52,1,19,0,226,277,9463,9514,"HIV-1 isolate GB1LV100191 from USA, complete genome",blastn,5357,91.6,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
57809,PRJEB39643_P_NODE_21081_length_396_cov_3.102167_g20888_i0,PRJEB39643,21081,396,3.102167,12.28458132,Gammaretrovirus murleu,3428959,Viruses,Viruses,593,5.019999999999998e-165,,NTclustered,gi|1167936838|gb|KY574516.1|,11786,g20888,i0,93.687,93.7373737373737,396,25,100,0,1,396,7598,7203,"Murine leukemia virus isolate M965-Akv1-MCF, complete genome",blastn,37120,593,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
138650,PRJEB7614_P_NODE_4661_length_195_cov_4.253012_g4594_i0,PRJEB7614,4661,195,4.253012,8.2933734,Lentivirus humimdef1,3418650,Viruses,Viruses,300,5.4500000000000004e-77,,NTclustered,gi|14039091|gb|AF219268.1|AF219268,11676,g4594,i0,94.416,100.302564102564,197,8,99,3,1,194,1711,1515,"HIV-1 isolate FIN9257 from Finland vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds",blastn,19559,300,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
138651,PRJEB7614_P_NODE_5561_length_183_cov_1.396104_g5494_i0,PRJEB7614,5561,183,1.396104,2.55487032,Lentivirus humimdef1,3418650,Viruses,Viruses,278,2.36e-70,,NTclustered,gi|1625847803|gb|MK384855.1|,11676,g5494,i0,93.989,100.109289617486,183,11,100,0,1,183,2963,3145,HIV-1 isolate 373Pt3-2001-P13G9 from USA defective genome,blastn,18320,278,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
144888,PRJEB8827_P_NODE_1861_length_185_cov_6.096154_g1839_i0,PRJEB8827,1861,185,6.096154,11.2778849,Lentivirus humimdef1,3418650,Viruses,Viruses,200,5.329999999999998e-47,,NTclustered,gi|1328390092|gb|MG197093.1|,11676,g1839,i0,88.69,91.2810810810811,168,13,91,5,18,185,6952,6791,"HIV-1 isolate 505_1730a.WG05 from USA nonfunctional gag protein (gag) gene, complete sequence; pol protein (pol) gene, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), and vpu protein (vpu) genes, complete cds; nonfunctional envelope glycoprotein (env) gene, complete sequence; and nef protein (nef) gene, complete cds",blastn,16887,200,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
195421,PRJNA1091388_P_NODE_4521_length_437_cov_1.447802_g4323_i0,PRJNA1091388,4521,437,1.447802,6.32689474,Mus musculus mobilized endogenous polytropic provirus,590745,Viruses,Viruses,808,0,,NTclustered,gi|221326511|gb|FJ544576.1|,590745,g4323,i0,100,68.6727688787185,437,0,100,0,1,437,2596,3032,"Mus musculus mobilized endogenous polytropic provirus clone 5 truncated gag-pol polyprotein (gag) gene, complete cds",blastn,30010,808,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Mus musculus mobilized endogenous polytropic provirus
221501,PRJNA1112809_P_NODE_83081_length_373_cov_1.720000_g79806_i0,PRJNA1112809,83081,373,1.72,6.4156,Gammaretrovirus murleu,3428959,Viruses,Viruses,488,2.2799999999999993e-133,,NTclustered,gi|1443026875|gb|MH450110.1|,11837,g79806,i0,90.349,118.522788203753,373,35,100,1,1,373,8188,7817,"Xenotropic murine leukemia virus isolate AKR6, complete genome",blastn,44209,488,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
241655,PRJNA1120060_P_NODE_1707061_length_284_cov_14.251185_g1689057_i0,PRJNA1120060,1707061,284,14.251185,40.4733654,Gammaretrovirus felleu,3428951,Viruses,Viruses,392,1.3599999999999997e-104,,NTclustered,gi|1249614576|dbj|AB898926.1|,11768,g1689057,i0,91.549,1,284,24,100,0,1,284,1489,1206,"Feline leukemia virus gene for gag-pol polyprotein gPr80, partial sequence, clone: g45-5R",blastn,284,392,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus felleu
265560,PRJNA1120060_P_NODE_397381_length_389_cov_4.386076_g379965_i0,PRJNA1120060,397381,389,4.386076,17.06183564,Pinus nigra virus 1,2267679,Viruses,Viruses,100,1.31e-16,,NTclustered,gi|1421686372|gb|MH551473.1|,2267679,g379965,i0,92.857,0.539845758354756,70,3,17,2,164,231,6598,6667,"Pinus nigra virus 1 isolate S1, complete genome",blastn,210,100,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,,Pinus nigra virus 1
267583,PRJNA1120060_P_NODE_52641_length_704_cov_3.969889_g41002_i0,PRJNA1120060,52641,704,3.969889,27.94801856,Pinus nigra virus 1,2267679,Viruses,Viruses,483,2.0999999999999992e-131,,NTclustered,gi|1421686370|gb|MH551472.1|,2267679,g41002,i0,79.291,3.00284090909091,705,135,99,10,1,699,6527,5828,"Pinus nigra virus 1 isolate BM, complete genome",blastn,2114,483,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,,Pinus nigra virus 1
383873,PRJNA315399_P_NODE_68261_length_219_cov_5.620879_g67813_i0,PRJNA315399,68261,219,5.620879,12.30972501,Spiretrovirus homo8524,3117321,Viruses,Viruses,363,7.88e-96,,NTclustered,gi|2710393193|tpg|BK066703.1|,3117321,g67813,i0,100,0.894977168949772,196,0,89,0,16,211,1451,1646,MAG TPA_asm: Spiretrovirus homo8524 isolate Spiretro8524 genomic sequence,blastn,196,363,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,,,Spiretrovirus homo8524
391197,PRJNA338400_P_NODE_601_length_1062_cov_5.641820_g466_i0,PRJNA338400,601,1062,5.64182,59.9161284,Gammaretrovirus murleu,3428959,Viruses,Viruses,1775,0,,NTclustered,gi|18448741|gb|AF462057.1|,11801,g466,i0,97.409,98.1214689265537,1042,27,98,0,21,1062,2596,3637,"Moloney murine leukemia virus neuropathogenic variant ts1-92b, complete genome",blastn,104205,1775,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
393538,PRJNA348537_S_NODE_1_length_4308_cov_230.754505_g0_i0,PRJNA348537,1,4308,230.754505,9940.9040754,Avian myeloblastosis-associated virus,11960,Viruses,Viruses,7574,0,,NTclustered,gi|407983|gb|L10922.1|MAVTYP1AAA,31669,g0,i0,98.398,99.897400185701,4308,69,100,0,1,4308,1234,5541,"Avian myeloblastosis-associated virus type 1 env (env) and gag (gag) genes, complete cds; and pol (pol) gene, partial cds",blastn,430358,7574,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Alpharetrovirus,Avian myeloblastosis-associated virus
399777,PRJNA376117_P_NODE_20741_length_303_cov_1.982609_g20439_i0,PRJNA376117,20741,303,1.982609,6.00730527,Gammaretrovirus aviretend,3428948,Viruses,Viruses,560,3.79e-155,,NTclustered,gi|566129537|gb|KF709431.1|,11636,g20439,i0,100,74.009900990099,303,0,100,0,1,303,4696,4394,"Reticuloendotheliosis virus strain GD1210, complete genome",blastn,22425,560,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus aviretend
429875,PRJNA432257_S_NODE_55501_length_222_cov_8.956757_g55120_i0,PRJNA432257,55501,222,8.956757,19.88400054,Lentivirus simimdef,3418654,Viruses,Viruses,52.8,0.02,,NTclustered,gi|1877673191|gb|MK686514.1|,11723,g55120,i0,100,0.126126126126126,28,0,13,0,151,178,6066,6093,"Simian immunodeficiency virus isolate E11.11D07 nonfunctional gag protein (gag) gene, complete sequence; nonfunctional pol protein (pol) gene, partial sequence; nonfunctional vif protein (vif) gene, complete sequence; vpx protein (vpx), vpr protein (vpr), tat protein (tat), and rev protein (rev) genes, complete cds; nonfunctional envelope glycoprotein (env) gene, complete sequence; and nonfunctional nef protein (nef) gene, partial sequence",blastn,28,52.8,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus simimdef
434809,PRJNA438478_P_NODE_3241_length_188_cov_1.218543_g2970_i0,PRJNA438478,3241,188,1.218543,2.29086084,Gammaretrovirus murleu,3428959,Viruses,Viruses,307,3.1100000000000005e-79,,NTclustered,gi|18448741|gb|AF462057.1|,11801,g2970,i0,98.837,63.5691489361702,172,2,91,0,17,188,4123,3952,"Moloney murine leukemia virus neuropathogenic variant ts1-92b, complete genome",blastn,11951,307,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
464190,PRJNA493632_P_NODE_45101_length_632_cov_2.239714_g41902_i0,PRJNA493632,45101,632,2.239714,14.15499248,Mus musculus mobilized endogenous polytropic provirus,590745,Viruses,Viruses,1123,0,,NTclustered,gi|221326511|gb|FJ544576.1|,590745,g41902,i0,98.734,151.030063291139,632,8,100,0,1,632,5327,4696,"Mus musculus mobilized endogenous polytropic provirus clone 5 truncated gag-pol polyprotein (gag) gene, complete cds",blastn,95451,1123,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Mus musculus mobilized endogenous polytropic provirus
497154,PRJNA528980_S_NODE_161_length_1840_cov_10.495840_g33_i2,PRJNA528980,161,1840,10.49584,193.123456,Gammaretrovirus murleu,3428959,Viruses,Viruses,2889,0,,NTclustered,gi|996271566|gb|KU324807.1|,11786,g33,i2,95.288,43.8603260869565,1825,80,99,4,1,1822,5474,7295,"Murine leukemia virus isolate Cast17/18, complete genome",blastn,80703,2889,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
564441,PRJNA578840_S_NODE_1_length_4750_cov_10.246756_g0_i0,PRJNA578840,1,4750,10.246756,486.72091,RD114 retrovirus,11834,Viruses,Viruses,8401,0,,NTclustered,gi|306482054|dbj|AB559882.1|,11834,g0,i0,99.912,58.0581052631579,4561,4,100,0,1,4561,3732,8292,"RD114 retrovirus proviral DNA, complete genome, strain: CRT1",blastn,275776,8401,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,RD114 retrovirus
564448,PRJNA578840_S_NODE_7781_length_185_cov_1.382353_g7640_i0,PRJNA578840,7781,185,1.382353,2.55735305,Gammaretrovirus murleu,3428959,Viruses,Viruses,326,8.430000000000001e-85,,NTclustered,gi|336462523|gb|JF908817.1|,11837,g7640,i0,98.378,99.8486486486486,185,3,100,0,1,185,3136,3320,"Xenotropic murine leukemia virus isolate EKVX, partial genome",blastn,18472,326,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
598290,PRJNA627266_P_NODE_5721_length_853_cov_2.660448_g5375_i0,PRJNA627266,5721,853,2.660448,22.69362144,Deltaretrovirus bovleu,3428211,Viruses,Viruses,1565,0,,NTclustered,gi|924371543|gb|KT122858.1|,11901,g5375,i0,99.766,100,853,2,100,0,1,853,2871,2019,"Bovine leukemia virus isolate YR2, complete genome",blastn,85300,1565,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Deltaretrovirus,Deltaretrovirus bovleu
611935,PRJNA641707_P_NODE_152481_length_233_cov_7.673913_g149818_i0,PRJNA641707,152481,233,7.673913,17.88021729,Gammaretrovirus murleu,3428959,Viruses,Viruses,377,3.03e-100,,NTclustered,gi|996271182|gb|KU324806.1|,11786,g149818,i0,97.297,95.3304721030043,222,6,95,0,1,222,7552,7331,"Murine leukemia virus isolate Kyushu, complete genome",blastn,22212,377,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
667007,PRJNA688414_P_NODE_5501_length_261_cov_1.728723_g5467_i0,PRJNA688414,5501,261,1.728723,4.51196703,Gammaretrovirus murleu,3428959,Viruses,Viruses,466,7.17e-127,,NTclustered,gi|331614|gb|K02725.1|MCFENVA,11785,g5467,i0,98.851,100,261,3,100,0,1,261,1203,943,"Mink cell focus-forming virus (MCF-MuLV, CI-3 isolate), proviral env gene",blastn,26100,466,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
690747,PRJNA704949_P_NODE_1597721_length_193_cov_1.083333_g1582382_i0,PRJNA704949,1597721,193,1.083333,2.09083269,Citrus blight-associated pararetrovirus,2689385,Viruses,Viruses,291,3.2399999999999994e-74,,NTclustered,gi|2288530032|gb|MZ330114.1|,2689385,g1582382,i0,93.782,2,193,12,100,0,1,193,4969,4777,"Citrus blight-associated pararetrovirus isolate TL 101/CBaPRV, complete genome",blastn,386,291,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,,Citrus blight-associated pararetrovirus
742864,PRJNA763243_P_NODE_22201_length_339_cov_5.037594_g21855_i0,PRJNA763243,22201,339,5.037594,17.07744366,Betaretrovirus squmon,3427297,Viruses,Viruses,588,1.97e-163,,NTclustered,gi|1666023499|gb|MK561030.1|,11856,g21855,i0,97.935,4.18289085545723,339,7,100,0,1,339,3608,3946,"Squirrel monkey retrovirus, complete genome",blastn,1418,588,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus squmon
781205,PRJNA796975_S_NODE_401_length_646_cov_2.529313_g336_i0,PRJNA796975,401,646,2.529313,16.33936198,Betaretrovirus maspfimon,3427294,Viruses,Viruses,1177,0,,NTclustered,gi|334702|gb|M12349.1|SIVMPCG,11855,g336,i0,99.536,4,646,3,100,0,1,646,4876,5521,"Simian Mason-Pfizer D-type retrovirus (MPMV/6A), complete genome",blastn,2584,1177,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus maspfimon
794863,PRJNA799842_P_NODE_41181_length_445_cov_1.005376_g39610_i0,PRJNA799842,41181,445,1.005376,4.4739232,Caulimovirus sp.,2692413,Viruses,Viruses,580,4.439999999999999e-161,,NTclustered,gi|1789142630|gb|MN203146.1|,2692413,g39610,i0,90.293,1.19101123595506,443,43,99,0,3,445,3238,3680,"Caulimovirus sp. isolate UHEPClV-1.CD-W ORF2 gene, complete cds; and ORF1 gene, partial cds",blastn,530,580,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,Caulimovirus,Caulimovirus sp.
808795,PRJNA811237_S_NODE_34101_length_162_cov_0.902655_g33861_i0,PRJNA811237,34101,162,0.902655,1.4623011,Lentivirus simimdef,3418654,Viruses,Viruses,65.8,1.73e-6,,NTclustered,gi|331687935|gb|JF741333.1|,11723,g33861,i0,95.122,3.42592592592593,41,2,25,0,1,41,324,284,"Simian immunodeficiency virus isolate SIVmac251_1991SIV4_C01 envelope glycoprotein-like (env) gene, partial sequence",blastn,555,65.8,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus simimdef
838001,PRJNA849646_P_NODE_1001_length_493_cov_3.671429_g884_i0,PRJNA849646,1001,493,3.671429,18.10014497,Gammaretrovirus murleu,3428959,Viruses,Viruses,905,0,,NTclustered,gi|4071074|gb|AF019230.1|AF019230,11786,g884,i0,99.797,99.9634888438134,493,1,100,0,1,493,2288,2780,Murine leukemia virus strain SRS 19-6 complete genome,blastn,49282,905,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
842525,PRJNA856288_S_NODE_19221_length_200_cov_1.666667_g19030_i0,PRJNA856288,19221,200,1.666667,3.333334,Lentivirus humimdef1,3418650,Viruses,Viruses,200,5.86e-47,,NTclustered,gi|2514204831|gb|OQ752860.1|,11676,g19030,i0,86,1,200,13,100,8,1,200,1175,991,HIV-1 isolate BC001_proviral_090_LargeDeletion from Canada defective provirus genomic sequence,blastn,200,200,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
853318,PRJNA876641_P_NODE_3141_length_414_cov_8.293255_g3067_i0,PRJNA876641,3141,414,8.293255,34.3340757,Gammaretrovirus gibleu,3428953,Viruses,Viruses,752,0,,NTclustered,gi|971888245|gb|KT724047.1|,11840,g3067,i0,99.517,76.9806763285024,414,1,100,1,1,414,8304,7892,"Gibbon ape leukemia virus strain San Francisco, complete genome",blastn,31870,752,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus gibleu
879969,PRJNA902356_S_NODE_33861_length_349_cov_1.188406_g33626_i0,PRJNA902356,33861,349,1.188406,4.14753694,Murine leukemia-related retroviruses,99182,Viruses,Viruses,638,1.99e-178,,NTclustered,gi|336087897|emb|FR872816.1|,438045,g33626,i0,99.713,99.810888252149,348,1,99,0,2,349,825,1172,"XMRV complete proviral genome, isolate S-162",blastn,34834,638,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Murine leukemia-related retroviruses
893738,PRJNA912577_P_NODE_4241_length_251_cov_0.865169_g4170_i0,PRJNA912577,4241,251,0.865169,2.17157419,Avian retrovirus,11955,Viruses,Viruses,453,5.34e-123,,NTclustered,gi|1834471271|gb|MN262538.1|,11955,g4170,i0,99.203,99.99203187251,251,2,100,0,1,251,915,1165,"Avian retrovirus isolate JX19ND02 env protein (env) gene, partial cds",blastn,25098,453,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Alpharetrovirus,Avian retrovirus
909398,PRJNA930380_P_NODE_13521_length_244_cov_0.900585_g13468_i0,PRJNA930380,13521,244,0.900585,2.1974274,Caulimovirus venafragariae,3048344,Viruses,Viruses,451,1.86e-122,,NTclustered,gi|929999488|gb|KR080547.1|,47903,g13468,i0,100,23,244,0,100,0,1,244,889,646,"Strawberry vein banding virus isolate BJ, complete genome",blastn,5612,451,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,Caulimovirus,Caulimovirus venafragariae
910634,PRJNA934332_P_NODE_5281_length_290_cov_0.921659_g5194_i0,PRJNA934332,5281,290,0.921659,2.6728111,Gammaretrovirus gibleu,3428953,Viruses,Viruses,536,6.079999999999999e-148,,NTclustered,gi|971888245|gb|KT724047.1|,11840,g5194,i0,100,79.3172413793103,290,0,100,0,1,290,2384,2673,"Gibbon ape leukemia virus strain San Francisco, complete genome",blastn,23002,536,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus gibleu
914544,PRJNA939369_S_NODE_71821_length_243_cov_0.905882_g71404_i0,PRJNA939369,71821,243,0.905882,2.20129326,Retrovirus rattus8197,3117313,Viruses,Viruses,425,1.12e-114,,NTclustered,gi|2710390889|tpg|BK066447.1|,3117313,g71404,i0,98.347,1.9917695473251,242,4,99,0,2,243,7118,7359,MAG TPA_asm: Retrovirus rattus8197 isolate Retro8197 genomic sequence,blastn,484,425,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,,Retrovirus rattus8197
922593,PRJNA942138_P_NODE_28621_length_266_cov_1.430052_g28470_i0,PRJNA942138,28621,266,1.430052,3.80393832,Baboon endogenous virus,196403,Viruses,Viruses,486,5.629999999999999e-133,,NTclustered,gi|61506|emb|X05470.1|,11764,g28470,i0,99.624,3.87218045112782,266,1,100,0,1,266,1085,820,Baboon endogenous virus strain M7 DNA,blastn,1030,486,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Baboon endogenous virus
942156,PRJNA966993_P_NODE_46901_length_315_cov_4.198347_g46449_i0,PRJNA966993,46901,315,4.198347,13.22479305,Gammaretrovirus murleu,3428959,Viruses,Viruses,577,3.9299999999999986e-160,,NTclustered,gi|86371744|gb|DQ359272.1|,11786,g46449,i0,99.683,56.9904761904762,315,1,100,0,1,315,327,13,"Murine leukemia virus retroviral envelope glycoprotein gene, complete cds",blastn,17952,577,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
942687,PRJNA967502_P_NODE_121_length_2417_cov_2.483788_g111_i0,PRJNA967502,121,2417,2.483788,60.03315596,RD114 retrovirus,11834,Viruses,Viruses,4458,0,,NTclustered,gi|306482054|dbj|AB559882.1|,11834,g111,i0,99.959,38.4493173355399,2417,1,100,0,1,2417,8196,5780,"RD114 retrovirus proviral DNA, complete genome, strain: CRT1",blastn,92932,4458,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,RD114 retrovirus
985830,PRJEB15333_P_NODE_11461_length_201_cov_1.572368_g11377_i0,PRJEB15333,11461,201,1.572368,3.16045968,Alpharetrovirus,153057,Viruses,Viruses,366,5.5e-97,,NTclustered,gi|407979|gb|L10923.1|MAVTYP1A2A,31668,g11377,i0,99.502,99.6417910447761,201,1,100,0,1,201,1984,1784,"Myeloblastosis-associated virus type 1/2 env gene, complete cds; gag gene, complete cds; pol gene, 3' end of cds",blastn,20028,366,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Alpharetrovirus,Avian myeloblastosis-associated virus
1009467,PRJNA1046144_P_NODE_72021_length_198_cov_8.798450_g71726_i0,PRJNA1046144,72021,198,8.79845,17.420931,Betaretrovirus,140052,Viruses,Viruses,361,2.51e-95,,NTclustered,gi|1666023499|gb|MK561030.1|,11856,g71726,i0,99.495,4,198,1,100,0,1,198,2098,2295,"Squirrel monkey retrovirus, complete genome",blastn,792,361,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus squmon
1011204,PRJNA1051145_P_NODE_2661_length_242_cov_22.160622_g2647_i0,PRJNA1051145,2661,242,22.160622,53.62870524,Gammaretrovirus,153135,Viruses,Viruses,418,1.8699999999999998e-112,,NTclustered,gi|331934|gb|J02255.1|MLMCG,11786,g2647,i0,100,66.1280991735537,226,0,93,0,17,242,3905,4130,"Moloney murine leukemia virus, complete genome",blastn,16003,418,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1011911,PRJNA1063685_S_NODE_31841_length_416_cov_1.839650_g31299_i0,PRJNA1063685,31841,416,1.83965,7.652944,root,1,Root_unresolved,Root_unresolved,99,5.07e-16,,NTclustered,gi|2859928216|gb|PQ511684.1|,11676,g31299,i0,95.312,28.3918269230769,64,0,15,1,348,408,9469,9532,"HIV-1 isolate GB1LV100191 from USA, complete genome",blastn,11811,100,0.99,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
1013219,PRJNA1067370_P_NODE_19661_length_423_cov_1.962857_g19113_i0,PRJNA1067370,19661,423,1.962857,8.30288511,root,1,Root_unresolved,Root_unresolved,776,0,,NTclustered,gi|331934|gb|J02255.1|MLMCG,11786,g19113,i0,99.764,42.8510638297872,423,1,100,0,1,423,937,1359,"Moloney murine leukemia virus, complete genome",blastn,18126,776,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1016681,PRJNA1077954_P_NODE_4281_length_593_cov_1.586538_g4046_i0,PRJNA1077954,4281,593,1.586538,9.40817034,Alpharetrovirus,153057,Viruses,Viruses,972,0,,NTclustered,gi|9629900|ref|NC_001866.1|,11867,g4046,i0,100,88.150084317032,526,0,89,0,68,593,3068,2543,"Avian myelocytomatosis virus, complete genome",blastn,52273,972,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Alpharetrovirus,Avian myelocytomatosis virus
1017157,PRJNA1084193_P_NODE_61_length_3564_cov_2.076769_g46_i0,PRJNA1084193,61,3564,2.076769,74.01604716,Gammaretrovirus,153135,Viruses,Viruses,6464,0,,NTclustered,gi|331934|gb|J02255.1|MLMCG,11786,g46,i0,99.411,96.6773288439955,3563,21,99,0,1,3563,1474,5036,"Moloney murine leukemia virus, complete genome",blastn,344558,6464,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1038960,PRJNA1160211_S_NODE_60681_length_545_cov_15.970339_g59496_i0,PRJNA1160211,60681,545,15.970339,87.03834755,root,1,Root_unresolved,Root_unresolved,521,3.4e-143,,NTclustered,gi|2088546|gb|U87552.1|MLU87552,11786,g59496,i0,99.308,71.702752293578,289,1,53,1,236,523,682,394,"Murine leukemia virus integrase (pol) gene, partial cds",blastn,39078,521,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1039432,PRJNA1163532_P_NODE_57821_length_227_cov_1.037975_g57597_i0,PRJNA1163532,57821,227,1.037975,2.35620325,root,1,Root_unresolved,Root_unresolved,414,2.2399999999999998e-111,,NTclustered,gi|1431162561|gb|EU075330.2|,11786,g57597,i0,99.559,18.9383259911894,227,1,100,0,1,227,4000,3774,"Mutant Murine leukemia virus clone 4-6w_c7 gag-pro-pol polyprotein gene, complete cds",blastn,4299,414,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1041869,PRJNA1182301_P_NODE_661_length_922_cov_4.368669_g556_i0,PRJNA1182301,661,922,4.368669,40.27912818,root,1,Root_unresolved,Root_unresolved,1661,0,,NTclustered,gi|331934|gb|J02255.1|MLMCG,11786,g556,i0,99.241,99.8926247288503,922,4,100,1,1,922,1976,2894,"Moloney murine leukemia virus, complete genome",blastn,92101,1661,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1070424,PRJNA348537_S_NODE_41_length_1097_cov_277.139360_g0_i7,PRJNA348537,41,1097,277.13936,3040.2187792,Alpharetrovirus,153057,Viruses,Viruses,1873,0,,NTclustered,gi|407983|gb|L10922.1|MAVTYP1AAA,31669,g0,i7,98.584,96.4630811303555,1059,15,97,0,39,1097,4483,5541,"Avian myeloblastosis-associated virus type 1 env (env) and gag (gag) genes, complete cds; and pol (pol) gene, partial cds",blastn,105820,1884,0.99416135881104,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Alpharetrovirus,Avian myeloblastosis-associated virus
1071967,PRJNA353362_P_NODE_381_length_249_cov_3.320000_g377_i0,PRJNA353362,381,249,3.32,8.2668,root,1,Root_unresolved,Root_unresolved,442,1.1399999999999995e-119,,NTclustered,gi|331934|gb|J02255.1|MLMCG,11786,g377,i0,100,98.6385542168675,239,0,96,0,4,242,2850,2612,"Moloney murine leukemia virus, complete genome",blastn,24561,442,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1087763,PRJNA429937_P_NODE_79901_length_366_cov_3.804154_g57518_i0,PRJNA429937,79901,366,3.804154,13.92320364,Gammaretrovirus,153135,Viruses,Viruses,610,4.569999999999999e-170,,NTclustered,gi|331934|gb|J02255.1|MLMCG,11786,g57518,i0,98.551,92.7513661202186,345,5,94,0,1,345,3907,4251,"Moloney murine leukemia virus, complete genome",blastn,33947,610,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1089833,PRJNA437204_P_NODE_44121_length_314_cov_1.261411_g43822_i0,PRJNA437204,44121,314,1.261411,3.96083054,root,1,Root_unresolved,Root_unresolved,542,1.43e-149,,NTclustered,gi|996270423|gb|KU324803.1|,11786,g43822,i0,97.771,100,314,7,100,0,1,314,5353,5666,"Murine leukemia virus isolate CAST-X, complete genome",blastn,31400,547,0.990859232175503,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1100314,PRJNA493632_P_NODE_111501_length_435_cov_1.306630_g108091_i0,PRJNA493632,111501,435,1.30663,5.6838405,root,1,Root_unresolved,Root_unresolved,795,0,,NTclustered,gi|57547617|tpd|BR000029.1|,10654,g108091,i0,99.539,31.2896551724138,434,2,99,0,2,435,3223,2790,"TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A",blastn,13611,802,0.991271820448878,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,Tungrovirus,Tungrovirus oryzae
1101380,PRJNA493632_P_NODE_24881_length_815_cov_1.517520_g22146_i0,PRJNA493632,24881,815,1.51752,12.367788,root,1,Root_unresolved,Root_unresolved,1467,0,,NTclustered,gi|57547617|tpd|BR000029.1|,10654,g22146,i0,99.017,82.6687116564417,814,8,99,0,2,815,2108,1295,"TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A",blastn,67375,1472,0.996603260869565,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,Tungrovirus,Tungrovirus oryzae
1130570,PRJNA560932_P_NODE_25641_length_352_cov_1.713262_g25285_i0,PRJNA560932,25641,352,1.713262,6.03068224,Betaretrovirus,140052,Viruses,Viruses,651,0,,NTclustered,gi|9627014|ref|NC_001514.1|,11856,g25285,i0,100,3.59659090909091,352,0,100,0,1,352,4365,4014,"Squirrel monkey retrovirus - HLB, complete genome",blastn,1266,651,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus squmon
1139335,PRJNA592753_P_NODE_54281_length_246_cov_0.890173_g53836_i0,PRJNA592753,54281,246,0.890173,2.18982558,root,1,Root_unresolved,Root_unresolved,444,3.14e-120,,NTclustered,gi|1173658|gb|U36602.1|MLU36602,11786,g53836,i0,99.187,8.5650406504065,246,2,100,0,1,246,874,1119,"Murine leukemia virus gPr80 envelope polyprotein precursor (env) mRNA, complete cds",blastn,2107,444,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1153497,PRJNA635201_P_NODE_1_length_8286_cov_7.803361_g0_i0,PRJNA635201,1,8286,7.803361,646.58649246,Betaretrovirus,140052,Viruses,Viruses,15029,0,,NTclustered,gi|9627014|ref|NC_001514.1|,11856,g0,i0,99.409,4.37762490948588,8292,35,100,14,1,8286,352,8635,"Squirrel monkey retrovirus - HLB, complete genome",blastn,36273,15029,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus squmon
1163487,PRJNA667863_P_NODE_17741_length_235_cov_2.240741_g17707_i0,PRJNA667863,17741,235,2.240741,5.26574135,root,1,Root_unresolved,Root_unresolved,424,3.87e-114,,NTclustered,gi|331934|gb|J02255.1|MLMCG,11786,g17707,i0,99.149,24.931914893617,235,2,100,0,1,235,6090,6324,"Moloney murine leukemia virus, complete genome",blastn,5859,424,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1205101,PRJNA763243_P_NODE_3221_length_752_cov_5.014728_g2944_i0,PRJNA763243,3221,752,5.014728,37.71075456,Betaretrovirus,140052,Viruses,Viruses,1225,0,,NTclustered,gi|9627014|ref|NC_001514.1|,11856,g2944,i0,99.263,12.7061170212766,678,5,90,0,1,678,4759,5436,"Squirrel monkey retrovirus - HLB, complete genome",blastn,9555,1225,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus squmon
1212874,PRJNA783180_P_NODE_1_length_5357_cov_3.024792_g0_i0,PRJNA783180,1,5357,3.024792,162.03810744,Gammaretrovirus,153135,Viruses,Viruses,9832,0,,NTclustered,gi|1233685432|gb|KY484771.1|,194958,g0,i0,99.795,73.0393877170058,5358,10,100,1,1,5357,8522,3165,"Porcine endogenous retrovirus A gag-pol polyprotein and env protein genes, complete cds",blastn,391272,9832,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus porConc
1224138,PRJNA811725_P_NODE_41881_length_241_cov_0.916667_g41635_i0,PRJNA811725,41881,241,0.916667,2.20916747,root,1,Root_unresolved,Root_unresolved,446,8.519999999999999e-121,,NTclustered,gi|717462921|gb|KM390026.1|,11676,g41635,i0,100,99.9958506224066,241,0,100,0,1,241,6342,6102,"HIV-1 clone NL43I151V from USA, complete genome",blastn,24099,446,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
1240599,PRJNA880781_P_NODE_6461_length_439_cov_2.095628_g6357_i0,PRJNA880781,6461,439,2.095628,9.19980692,Alpharetrovirus,153057,Viruses,Viruses,798,0,,NTclustered,gi|9629900|ref|NC_001866.1|,11867,g6357,i0,99.543,99.1138952164009,438,2,99,0,2,439,2974,2537,"Avian myelocytomatosis virus, complete genome",blastn,43511,804,0.992537313432836,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Alpharetrovirus,Avian myelocytomatosis virus
1245855,PRJNA900062_P_NODE_53121_length_378_cov_1.491803_g50939_i0,PRJNA900062,53121,378,1.491803,5.63901534,Alpharetrovirus,153057,Viruses,Viruses,689,0,,NTclustered,gi|9629900|ref|NC_001866.1|,11867,g50939,i0,99.734,99.5608465608466,376,1,99,0,2,377,2972,2597,"Avian myelocytomatosis virus, complete genome",blastn,37634,695,0.99136690647482,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Alpharetrovirus,Avian myelocytomatosis virus
1248359,PRJNA906294_P_NODE_1561_length_3650_cov_888.655857_g51_i15,PRJNA906294,1561,3650,888.655857,32435.9387805,Gammaretrovirus,153135,Viruses,Viruses,4983,0,,NTclustered,gi|1233685432|gb|KY484771.1|,194958,g51,i15,98.015,74.3668493150685,2872,52,99,3,1,2871,5805,8672,"Porcine endogenous retrovirus A gag-pol polyprotein and env protein genes, complete cds",blastn,271439,4983,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus porConc
1248887,PRJNA906294_P_NODE_70221_length_545_cov_1.646186_g66121_i0,PRJNA906294,70221,545,1.646186,8.9717137,Betaretrovirus,140052,Viruses,Viruses,1005,0,,NTclustered,gi|9627014|ref|NC_001514.1|,11856,g66121,i0,100,3.32844036697248,544,0,99,0,1,544,3794,4337,"Squirrel monkey retrovirus - HLB, complete genome",blastn,1814,1005,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus squmon
1249027,PRJNA906294_S_NODE_441_length_349_cov_1.239130_g440_i0,PRJNA906294,441,349,1.23913,4.3245637,root,1,Root_unresolved,Root_unresolved,603,7.259999999999999e-168,,NTclustered,gi|331934|gb|J02255.1|MLMCG,11786,g440,i0,98.817,95.9512893982808,338,4,97,0,12,349,1841,1504,"Moloney murine leukemia virus, complete genome",blastn,33487,603,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1249032,PRJNA906294_S_NODE_781_length_289_cov_1.185185_g780_i0,PRJNA906294,781,289,1.185185,3.42518465,root,1,Root_unresolved,Root_unresolved,529,1.01e-145,,NTclustered,gi|1045515|gb|U36800.1|MLU36800,11786,g780,i0,99.654,6.44982698961938,289,1,100,0,1,289,1399,1111,"Murine leukemia virus Mo Ampho Delta recombinant envelope polyprotein (env) mRNA, complete cds",blastn,1864,529,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1249290,PRJNA909445_P_NODE_15981_length_243_cov_1.076471_g15913_i0,PRJNA909445,15981,243,1.076471,2.61582453,root,1,Root_unresolved,Root_unresolved,427,3.11e-115,,NTclustered,gi|331934|gb|J02255.1|MLMCG,11786,g15913,i0,98.75,99.962962962963,240,3,99,0,4,243,2618,2379,"Moloney murine leukemia virus, complete genome",blastn,24291,427,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1249297,PRJNA909445_P_NODE_2401_length_506_cov_1.244804_g2335_i0,PRJNA909445,2401,506,1.244804,6.29870824,root,1,Root_unresolved,Root_unresolved,929,0,,NTclustered,gi|428231112|gb|JX843707.1|,189458,g2335,i0,99.802,67.300395256917,506,1,100,0,1,506,636,131,"Human betaretrovirus isolate pIW176 env gene, partial cds",blastn,34054,929,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus murmamtum
1295132,PRJEB12982_P_NODE_16802_length_167_cov_0.974576_g16639_i0,PRJEB12982,16802,167,0.974576,1.62754192,Lentivirus humimdef1,3418650,Viruses,Viruses,272,9.88e-69,,NTclustered,gi|254929527|gb|GQ333588.1|,11676,g16639,i0,96.364,98.7964071856287,165,6,99,0,1,165,264,100,"HIV-1 isolate B08167A1 from Uganda envelope glycoprotein (env) gene, partial cds",blastn,16499,272,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
1295276,PRJEB12982_P_NODE_9362_length_232_cov_1.114754_g9199_i0,PRJEB12982,9362,232,1.114754,2.58622928,Lentivirus humimdef1,3418650,Viruses,Viruses,396,8.319999999999995e-106,,NTclustered,gi|2057218147|gb|MW124063.1|,11676,g9199,i0,97.414,99.9008620689655,232,6,100,0,1,232,687,918,"HIV-1 clone SN 015 from Senegal gag protein (gag) gene, complete cds; and nonfunctional pol protein (pol) gene, partial sequence",blastn,23177,396,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
1413336,PRJEB7614_P_NODE_382_length_412_cov_10.467363_g327_i0,PRJEB7614,382,412,10.467363,43.12553556,Lentivirus humimdef1,3418650,Viruses,Viruses,497,4.23e-136,,NTclustered,gi|542125849|gb|KC863138.1|,11676,g327,i0,92.507,84.6650485436893,347,26,84,0,66,412,1571,1225,"HIV-1 isolate C059-3A11 from Malawi envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds",blastn,34882,497,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
1447558,PRJNA1046144_P_NODE_67182_length_227_cov_4.556962_g66887_i0,PRJNA1046144,67182,227,4.556962,10.34430374,Betaretrovirus squmon,3427297,Viruses,Viruses,420,4.81e-113,,NTclustered,gi|1666023499|gb|MK561030.1|,11856,g66887,i0,100,4.00440528634361,227,0,100,0,1,227,2079,1853,"Squirrel monkey retrovirus, complete genome",blastn,909,420,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus squmon
1466131,PRJNA1077954_P_NODE_22402_length_294_cov_1.153846_g22161_i0,PRJNA1077954,22402,294,1.153846,3.39230724,Soymovirus maculavaccinii,3047694,Viruses,Viruses,318,2.439999999999999e-82,,NTclustered,gi|351582064|gb|JN205460.1|,172220,g22161,i0,86.577,16.7517006802721,298,28,99,8,5,294,2426,2719,"Blueberry red ringspot virus isolate BRRSV24, complete genome",blastn,4925,318,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,Soymovirus,Soymovirus maculavaccinii
1499083,PRJNA1115053_S_NODE_181122_length_202_cov_2.440252_g179305_i0,PRJNA1115053,181122,202,2.440252,4.92930904,Endogenous prairie dog retrovirus,2744144,Viruses,Viruses,353,4.3e-93,,NTclustered,gi|1858807278|gb|MT361317.1|,2744144,g179305,i0,98.049,29.4108910891089,205,1,100,1,1,202,2997,2793,"Endogenous prairie dog retrovirus isolate prairie dog 14-1382 Gag (gag), Pro (pro), and Pol (pol) genes, complete cds",blastn,5941,353,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,,Endogenous prairie dog retrovirus
1517521,PRJNA1120060_P_NODE_1793222_length_281_cov_1.875000_g1775210_i0,PRJNA1120060,1793222,281,1.875,5.26875,Pinus nigra virus 1,2267679,Viruses,Viruses,241,5.15e-59,,NTclustered,gi|1421686372|gb|MH551473.1|,2267679,g1775210,i0,82.456,3.04270462633452,285,41,99,6,1,279,2881,2600,"Pinus nigra virus 1 isolate S1, complete genome",blastn,855,241,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,,Pinus nigra virus 1
1534267,PRJNA1120060_P_NODE_313322_length_414_cov_3.788856_g296164_i0,PRJNA1120060,313322,414,3.788856,15.68586384,Pinus nigra virus 1,2267679,Viruses,Viruses,505,2.54e-138,,NTclustered,gi|1571847622|ref|NC_040841.1|,2267679,g296164,i0,88.675,3.00724637681159,415,45,100,2,1,414,4096,4509,"Pinus nigra virus 1 isolate B2, complete genome",blastn,1245,505,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,,Pinus nigra virus 1
1542733,PRJNA1120060_P_NODE_578962_length_352_cov_2.455197_g561260_i0,PRJNA1120060,578962,352,2.455197,8.64229344,Pinus nigra virus 1,2267679,Viruses,Viruses,300,1.08e-76,,NTclustered,gi|1571847622|ref|NC_040841.1|,2267679,g561260,i0,82.698,2.90625,341,56,97,1,12,352,6528,6191,"Pinus nigra virus 1 isolate B2, complete genome",blastn,1023,300,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,,Pinus nigra virus 1
1548375,PRJNA1120060_P_NODE_95922_length_577_cov_2.815476_g81616_i0,PRJNA1120060,95922,577,2.815476,16.24529652,Pinus nigra virus 1,2267679,Viruses,Viruses,326,3.04e-84,,NTclustered,gi|1421686372|gb|MH551473.1|,2267679,g81616,i0,76.603,2.99306759098787,577,124,99,7,1,573,3892,3323,"Pinus nigra virus 1 isolate S1, complete genome",blastn,1727,326,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,,Pinus nigra virus 1
1585840,PRJNA1163532_P_NODE_2642_length_1157_cov_1.882353_g2503_i0,PRJNA1163532,2642,1157,1.882353,21.77882421,Gammaretrovirus murleu,3428959,Viruses,Viruses,1847,0,,NTclustered,gi|28892668|gb|AF411814.1|,188539,g2503,i0,95.686,70.4874675885912,1159,33,100,6,1,1157,6925,8068,"Amphotropic murine leukemia virus strain 1313, complete genome",blastn,81554,1847,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1590940,PRJNA1174770_P_NODE_7482_length_173_cov_0.758065_g7393_i0,PRJNA1174770,7482,173,0.758065,1.31145245,Citrus endogenous pararetrovirus,1435008,Viruses,Viruses,239,1.04e-58,,NTclustered,gi|1189354729|gb|KY609920.1|,1435008,g7393,i0,95.364,6.12138728323699,151,6,87,1,2,152,1978,2127,"Citrus endogenous pararetrovirus strain SPBR01 polyprotein gene, complete cds",blastn,1059,239,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,,Citrus endogenous pararetrovirus
1591402,PRJNA1175041_P_NODE_37002_length_583_cov_1.178431_g34161_i0,PRJNA1175041,37002,583,1.178431,6.87025273,Retroviridae sp.,2681591,Viruses,Viruses,990,0,,NTclustered,gi|1870356934|gb|MT138119.1|,2681591,g34161,i0,97.418,0.996569468267582,581,15,99,0,1,581,4923,4343,Retroviridae sp. isolate bls219ret1 genomic sequence,blastn,581,990,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,,Retroviridae sp.
1605333,PRJNA1215711_P_NODE_42_length_2595_cov_8.004758_g29_i0,PRJNA1215711,42,2595,8.004758,207.7234701,RD114 retrovirus,11834,Viruses,Viruses,4337,0,,NTclustered,gi|306482054|dbj|AB559882.1|,11834,g29,i0,99.873,42.6990366088632,2357,3,100,0,1,2357,8239,5883,"RD114 retrovirus proviral DNA, complete genome, strain: CRT1",blastn,110804,4337,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,RD114 retrovirus
1641603,PRJNA207343_S_NODE_2102_length_646_cov_6.954023_g1636_i0,PRJNA207343,2102,646,6.954023,44.92298858,Tasmanian devil retrovirus,1332312,Viruses,Viruses,754,0,,NTclustered,gi|618757818|gb|KC845928.1|,1332312,g1636,i0,98.818,93.109907120743,423,5,99,0,215,637,1261,839,"Tasmanian devil retrovirus strain DRV2010 polymerase (pol) and envelope protein (env) genes, partial cds",blastn,60149,754,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Alpharetrovirus,Tasmanian devil retrovirus
1655544,PRJNA315314_S_NODE_18322_length_192_cov_4581.717791_g18001_i0,PRJNA315314,18322,192,4581.717791,8796.89815872,Lentivirus pum,3418653,Viruses,Viruses,73.1,1.27e-8,,NTclustered,gi|1817429831|gb|MN531141.1|,12804,g18001,i0,95.652,22.5572916666667,46,1,23,1,148,192,3613,3658,"Puma lentivirus isolate x1432, partial genome",blastn,4331,73.1,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus pum
1728170,PRJNA492836_P_NODE_18922_length_298_cov_1.026667_g18706_i0,PRJNA492836,18922,298,1.026667,3.05946766,Caulimovirus tessellodahliae,3047789,Viruses,Viruses,106,2.1e-18,,NTclustered,gi|530721674|gb|KC967481.1|,213888,g18706,i0,86.869,0.332214765100671,99,7,32,6,139,234,6426,6331,"Dahlia mosaic virus isolate D10-NZ, complete genome",blastn,99,106,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,Caulimovirus,Caulimovirus tessellodahliae
1735140,PRJNA493632_P_NODE_242162_length_319_cov_0.914634_g238726_i0,PRJNA493632,242162,319,0.914634,2.91768246,Gammaretrovirus porConc,3428960,Viruses,Viruses,311,4.47e-80,,NTclustered,gi|333034216|gb|HQ540594.1|,194959,g238726,i0,95.855,0.605015673981191,193,6,60,2,1,191,9212,9404,"Porcine endogenous retrovirus B clone 742H1, complete genome",blastn,193,311,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus porConc
1773017,PRJNA528980_S_NODE_42_length_2743_cov_8.630820_g33_i0,PRJNA528980,42,2743,8.63082,236.7433926,Gammaretrovirus murleu,3428959,Viruses,Viruses,4024,0,,NTclustered,gi|996271566|gb|KU324807.1|,11786,g33,i0,93.154,60.2602989427634,2746,182,100,4,1,2743,7136,4394,"Murine leukemia virus isolate Cast17/18, complete genome",blastn,165294,4024,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1797551,PRJNA556992_P_NODE_1011562_length_229_cov_3.621795_g1009372_i0,PRJNA556992,1011562,229,3.621795,8.29391055,Red clover bacilliform virus,1214920,Viruses,Viruses,165,2.52e-36,,NTclustered,gi|397770868|gb|JX069965.1|,1214920,g1009372,i0,81.726,0.982532751091703,197,36,86,0,29,225,16,212,"Red clover bacilliform virus isolate 12/13 polyprotein gene, partial cds",blastn,225,165,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Caulimoviridae,,Red clover bacilliform virus
1842702,PRJNA594101_S_NODE_44242_length_262_cov_2.661376_g43940_i0,PRJNA594101,44242,262,2.661376,6.97280512,Lentivirus humimdef1,3418650,Viruses,Viruses,62.1,3.97e-5,,NTclustered,gi|407734945|gb|JX447155.1|,11676,g43940,i0,95,0.305343511450382,40,0,15,2,129,168,4394,4357,"HIV-1 isolate AA039a03R from Thailand pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds",blastn,80,62.1,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus humimdef1
1866732,PRJNA612697_P_NODE_822_length_1542_cov_200.864534_g87_i3,PRJNA612697,822,1542,200.864534,3097.33111428,Lentivirus equinfane,3418648,Viruses,Viruses,1807,0,,NTclustered,gi|2532634773|gb|OP882568.1|,11665,g87,i3,100,49.2833981841764,978,0,81,0,267,1244,663,1640,"Equine infectious anemia virus isolate Santarem pol polyprotein gene, partial cds",blastn,75995,1807,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Lentivirus,Lentivirus equinfane
1927073,PRJNA680914_P_NODE_21022_length_248_cov_0.880000_g20874_i0,PRJNA680914,21022,248,0.88,2.1824,Gammaretrovirus murleu,3428959,Viruses,Viruses,453,5.2600000000000005e-123,,NTclustered,gi|4071074|gb|AF019230.1|AF019230,11786,g20874,i0,99.597,3,248,1,100,0,1,248,6571,6324,Murine leukemia virus strain SRS 19-6 complete genome,blastn,744,453,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
1988660,PRJNA727493_S_NODE_42502_length_209_cov_1.925000_g42178_i0,PRJNA727493,42502,209,1.925,4.02325,Gammaretrovirus murleu,3428959,Viruses,Viruses,387,4.42e-103,,NTclustered,gi|28892668|gb|AF411814.1|,188539,g42178,i0,100,99.9521531100478,209,0,100,0,1,209,2887,2679,"Amphotropic murine leukemia virus strain 1313, complete genome",blastn,20890,387,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus murleu
2005693,PRJNA753151_S_NODE_167262_length_225_cov_0.879121_g164972_i0,PRJNA753151,167262,225,0.879121,1.97802225,Betaretrovirus murmamtum,3427295,Viruses,Viruses,394,2.89e-105,,NTclustered,gi|303686|dbj|D16249.1|MMTPROVR,11757,g164972,i0,98.222,36.6355555555556,225,4,100,0,1,225,893,669,"Mouse mammary tumor virus proviral DNA (from Mus musculus mammary gland) for gag-protease-pol polyprotein and env protein, complete cds",blastn,8243,394,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Betaretrovirus,Betaretrovirus murmamtum
2029612,PRJNA776712_P_NODE_9082_length_251_cov_1.314607_g9040_i0,PRJNA776712,9082,251,1.314607,3.29966357,Gammaretrovirus gibleu,3428953,Viruses,Viruses,464,2.47e-126,,NTclustered,gi|971888245|gb|KT724047.1|,11840,g9040,i0,100,40.2191235059761,251,0,100,0,1,251,5698,5448,"Gibbon ape leukemia virus strain San Francisco, complete genome",blastn,10095,464,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,Gammaretrovirus gibleu
2044680,PRJNA788440_P_NODE_11002_length_247_cov_1.770115_g10889_i0,PRJNA788440,11002,247,1.770115,4.37218405,RD114 retrovirus,11834,Viruses,Viruses,409,1.1499999999999998e-109,,NTclustered,gi|306482054|dbj|AB559882.1|,11834,g10889,i0,100,45.0202429149798,221,0,89,0,2,222,223,3,"RD114 retrovirus proviral DNA, complete genome, strain: CRT1",blastn,11120,409,1,Viruses,,Pararnavirae,Artverviricota,Revtraviricetes,Ortervirales,Retroviridae,Gammaretrovirus,RD114 retrovirus