rowid,query,bioproject,node,length,coverage,rel_abundance,taxname_lca,taxid_lca,taxoncategory,taxoncategorysimple,bits,evalue,lowcoverage_flag,analysis_used,target,taxid,gene,allele,pident,sumperc_cov,alnlen,mismatch,qcov,gapopen,qstart,qend,tstart,tend,target_title,analysis,sumalnlen,maxbits,bits_percmax,tax_superkingdom,tax_clade,tax_kingdom,tax_phylum,tax_class,tax_order,tax_family,tax_genus,tax_species
4648804,PRJNA825466_P_NODE_1924_length_507_cov_2.218894_g1824_i0,PRJNA825466,1924,507,2.218894,11.24979258,Betacoronavirus pandemicum,3418604,Viruses,Viruses,937,0,,NTclustered,gi|2438993056|gb|OQ369223.1|,2697049,g1824,i0,100,100,507,0,100,0,1,507,14172,13666,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/TX-CDC-QDX45690442/2023, complete genome",blastn,50700,937,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
4648848,PRJNA825466_P_NODE_29864_length_217_cov_6.555556_g29763_i0,PRJNA825466,29864,217,6.555556,14.22555652,Betacoronavirus pandemicum,3418604,Viruses,Viruses,401,1.6499999999999994e-107,,NTclustered,gi|2499447400|emb|OX492971.1|,2697049,g29763,i0,100,100,217,0,100,0,1,217,21221,21005,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,21700,401,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
5923639,PRJNA825466_P_NODE_13685_length_265_cov_1.942708_g13584_i0,PRJNA825466,13685,265,1.942708,5.1481762,Betacoronavirus pandemicum,3418604,Viruses,Viruses,490,4.3299999999999986e-134,,NTclustered,gi|1920148641|gb|MW184352.1|,2697049,g13584,i0,100,100,265,0,100,0,1,265,7350,7086,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/AUS/VIC15830/2020, complete genome",blastn,26500,490,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
5923659,PRJNA825466_P_NODE_1965_length_502_cov_1.708625_g1865_i0,PRJNA825466,1965,502,1.708625,8.5772975,Betacoronavirus pandemicum,3418604,Viruses,Viruses,922,0,,NTclustered,gi|2116533731|emb|OU829539.1|,2697049,g1865,i0,99.801,100,502,1,100,0,1,502,11133,10632,"Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1",blastn,50200,922,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
5923687,PRJNA825466_P_NODE_28025_length_241_cov_4.208333_g27924_i0,PRJNA825466,28025,241,4.208333,10.14208253,Betacoronavirus pandemicum,3418604,Viruses,Viruses,446,8.519999999999999e-121,,NTclustered,gi|2499447400|emb|OX492971.1|,2697049,g27924,i0,100,100,241,0,100,0,1,241,24589,24829,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,24100,446,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
7198608,PRJNA825466_P_NODE_406_length_1022_cov_2.084299_g335_i0,PRJNA825466,406,1022,2.084299,21.30153578,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1888,0,,NTclustered,gi|1854182511|gb|MT605815.1|,2697049,g335,i0,100,100,1022,0,100,0,1,1022,2286,3307,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-S112/2020, complete genome",blastn,102200,1888,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
8473361,PRJNA825466_P_NODE_3367_length_406_cov_2.063063_g3266_i0,PRJNA825466,3367,406,2.063063,8.37603578,Betacoronavirus pandemicum,3418604,Viruses,Viruses,750,0,,NTclustered,gi|2027824975|gb|MW967642.1|,2697049,g3266,i0,100,100,406,0,100,0,1,406,1297,1702,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/NJ-CDC-ASC210012274/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds",blastn,40600,750,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
8473363,PRJNA825466_P_NODE_3587_length_396_cov_3.260062_g3486_i0,PRJNA825466,3587,396,3.260062,12.90984552,Betacoronavirus pandemicum,3418604,Viruses,Viruses,732,0,,NTclustered,gi|2193475630|gb|OM664681.1|,2697049,g3486,i0,100,99.9949494949495,396,0,100,0,1,396,29841,29446,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/PA-CDC-STM-E5GUWP394/2022, complete genome",blastn,39598,732,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
8473378,PRJNA825466_P_NODE_767_length_762_cov_2.728592_g682_i0,PRJNA825466,767,762,2.728592,20.79187104,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1391,0,,NTclustered,gi|2635535590|emb|OY977775.1|,2697049,g682,i0,99.607,100.517060367454,763,2,100,1,1,762,14348,15110,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,76594,1391,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
9748434,PRJNA825466_P_NODE_1848_length_515_cov_2.199095_g1748_i0,PRJNA825466,1848,515,2.199095,11.32533925,Betacoronavirus pandemicum,3418604,Viruses,Viruses,948,0,,NTclustered,gi|1934877293|gb|MW276335.1|,2697049,g1748,i0,99.806,100,515,1,100,0,1,515,11191,11705,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CZB-10798/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds",blastn,51500,948,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
9748443,PRJNA825466_P_NODE_21368_length_247_cov_0.885057_g21267_i0,PRJNA825466,21368,247,0.885057,2.18609079,Betacoronavirus pandemicum,3418604,Viruses,Viruses,457,4.05e-124,,NTclustered,gi|2182078985|gb|OM344698.1|,2697049,g21267,i0,100,100,247,0,100,0,1,247,27024,26778,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/TX-CDC-LC0474858/2022, complete genome",blastn,24700,457,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
9748493,PRJNA825466_P_NODE_5368_length_345_cov_2.915441_g5267_i0,PRJNA825466,5368,345,2.915441,10.05827145,Betacoronavirus pandemicum,3418604,Viruses,Viruses,638,1.97e-178,,NTclustered,gi|2028980905|gb|MZ002360.1|,2697049,g5267,i0,100,100,345,0,100,0,1,345,9780,10124,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome",blastn,34500,638,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
11024140,PRJNA825466_P_NODE_2149_length_482_cov_2.567237_g2049_i0,PRJNA825466,2149,482,2.567237,12.37408234,Betacoronavirus pandemicum,3418604,Viruses,Viruses,891,0,,NTclustered,gi|2499447400|emb|OX492971.1|,2697049,g2049,i0,100,100,482,0,100,0,1,482,25588,26069,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,48200,891,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
11024189,PRJNA825466_P_NODE_849_length_733_cov_3.845455_g761_i0,PRJNA825466,849,733,3.845455,28.18718515,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1354,0,,NTclustered,gi|2028980905|gb|MZ002360.1|,2697049,g761,i0,100,100,733,0,100,0,1,733,16435,15703,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome",blastn,73300,1354,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
12299679,PRJNA825466_P_NODE_8270_length_304_cov_4.138528_g8169_i0,PRJNA825466,8270,304,4.138528,12.58112512,Betacoronavirus pandemicum,3418604,Viruses,Viruses,562,1.06e-155,,NTclustered,gi|2028980905|gb|MZ002360.1|,2697049,g8169,i0,100,100,304,0,100,0,1,304,26513,26816,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome",blastn,30400,562,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
13573994,PRJNA825466_P_NODE_231_length_1315_cov_3.048309_g186_i0,PRJNA825466,231,1315,3.048309,40.08526335,Betacoronavirus pandemicum,3418604,Viruses,Viruses,2423,0,,NTclustered,gi|1826681570|gb|MT259226.1|,2697049,g186,i0,99.924,100,1315,1,100,0,1,1315,1320,6,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/CHN/Wuhan_OS52/2020, complete genome",blastn,131500,2423,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
14848522,PRJNA825466_P_NODE_372_length_1069_cov_1.427711_g304_i0,PRJNA825466,372,1069,1.427711,15.26223059,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1969,0,,NTclustered,gi|2113021200|gb|OK499160.1|,2697049,g304,i0,99.906,100,1069,1,100,0,1,1069,19678,20746,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/FL-CDC-ASC210408444/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes, complete cds",blastn,106900,1969,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
14848536,PRJNA825466_P_NODE_772_length_760_cov_2.660844_g687_i0,PRJNA825466,772,760,2.660844,20.2224144,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1404,0,,NTclustered,gi|2160511214|gb|OL739269.1|,2697049,g687,i0,100,100,760,0,100,0,1,760,25545,24786,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/TWN/KMUH-2/2020, complete genome",blastn,76000,1404,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
14848538,PRJNA825466_P_NODE_7812_length_309_cov_3.038136_g7711_i0,PRJNA825466,7812,309,3.038136,9.38784024,Betacoronavirus pandemicum,3418604,Viruses,Viruses,571,1.7899999999999995e-158,,NTclustered,gi|2499447400|emb|OX492971.1|,2697049,g7711,i0,100,100,309,0,100,0,1,309,26064,26372,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,30900,571,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
16122990,PRJNA825466_P_NODE_1153_length_641_cov_2.330986_g1057_i0,PRJNA825466,1153,641,2.330986,14.94162026,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1181,0,,NTclustered,gi|2504372624|gb|OQ974494.1|,2697049,g1057,i0,100,99.6911076443058,639,0,99,0,3,641,4225,4863,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/B09229/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds",blastn,63902,1181,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
16123072,PRJNA825466_P_NODE_93_length_1909_cov_2.651416_g72_i0,PRJNA825466,93,1909,2.651416,50.61553144,Betacoronavirus pandemicum,3418604,Viruses,Viruses,3504,0,,NTclustered,gi|2054232605|emb|OU182279.1|,2697049,g72,i0,99.79,100,1909,4,100,0,1,1909,27113,29021,"Severe acute respiratory syndrome coronavirus 2 isolate hCoV-19/Iceland/1507/2020 genome assembly, chromosome: hCoV-19_Iceland_1507_2020",blastn,190900,3504,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
17398821,PRJNA825466_P_NODE_654_length_827_cov_2.208223_g573_i0,PRJNA825466,654,827,2.208223,18.26200421,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1517,0,,NTclustered,gi|2453877168|emb|OX443998.1|,2697049,g573,i0,99.758,103.785973397823,827,2,100,0,1,827,22329,21503,"Severe acute respiratory syndrome coronavirus 2 isolate 18208598 genome assembly, complete genome: monopartite",blastn,85831,1517,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
18671720,PRJNA825466_P_NODE_1155_length_641_cov_2.007042_g1059_i0,PRJNA825466,1155,641,2.007042,12.86513922,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1157,0,,NTclustered,gi|2241599185|emb|OW826095.1|,2697049,g1059,i0,99.22,100,641,5,100,0,1,641,7001,6361,"Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1",blastn,64100,1157,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
18671750,PRJNA825466_P_NODE_1795_length_523_cov_2.833333_g1696_i0,PRJNA825466,1795,523,2.833333,14.81833159,Betacoronavirus pandemicum,3418604,Viruses,Viruses,966,0,,NTclustered,gi|2499447400|emb|OX492971.1|,2697049,g1696,i0,100,100,523,0,100,0,1,523,5418,4896,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,52300,966,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
18671785,PRJNA825466_P_NODE_455_length_970_cov_2.659978_g380_i0,PRJNA825466,455,970,2.659978,25.8017866,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1792,0,,NTclustered,gi|2523306575|emb|OX913992.1|,2697049,g380,i0,100,100,970,0,100,0,1,970,23809,22840,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,97000,1792,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
19946951,PRJNA825466_P_NODE_14036_length_263_cov_4.531579_g13935_i0,PRJNA825466,14036,263,4.531579,11.91805277,Betacoronavirus pandemicum,3418604,Viruses,Viruses,486,5.5499999999999986e-133,,NTclustered,gi|2499447400|emb|OX492971.1|,2697049,g13935,i0,100,100,263,0,100,0,1,263,6100,6362,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,26300,486,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
19946961,PRJNA825466_P_NODE_1616_length_546_cov_3.059197_g1518_i0,PRJNA825466,1616,546,3.059197,16.70321562,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1009,0,,NTclustered,gi|2028980905|gb|MZ002360.1|,2697049,g1518,i0,100,100,546,0,100,0,1,546,15166,15711,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome",blastn,54600,1009,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
21222457,PRJNA825466_P_NODE_15897_length_253_cov_1.122222_g15796_i0,PRJNA825466,15897,253,1.122222,2.83922166,Betacoronavirus pandemicum,3418604,Viruses,Viruses,468,1.92e-127,,NTclustered,gi|2103422285|emb|OU727096.1|,2697049,g15796,i0,100,100,253,0,100,0,1,253,29213,28961,"Severe acute respiratory syndrome coronavirus 2 isolate hCoV-19/Switzerland/JU-UHB-43039536/2021 genome assembly, chromosome: 1",blastn,25300,468,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
21222517,PRJNA825466_P_NODE_897_length_714_cov_2.324493_g807_i0,PRJNA825466,897,714,2.324493,16.59688002,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1319,0,,NTclustered,gi|2028980905|gb|MZ002360.1|,2697049,g807,i0,100,100,714,0,100,0,1,714,12962,13675,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome",blastn,71400,1319,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
22497149,PRJNA825466_P_NODE_14798_length_259_cov_1.301075_g14697_i0,PRJNA825466,14798,259,1.301075,3.36978425,Betacoronavirus pandemicum,3418604,Viruses,Viruses,473,4.25e-129,,NTclustered,gi|2028980905|gb|MZ002360.1|,2697049,g14697,i0,99.614,100,259,1,100,0,1,259,22550,22292,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome",blastn,25900,473,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
22497150,PRJNA825466_P_NODE_14838_length_259_cov_1.236559_g14737_i0,PRJNA825466,14838,259,1.236559,3.20268781,Betacoronavirus pandemicum,3418604,Viruses,Viruses,479,9.13e-131,,NTclustered,gi|2499447400|emb|OX492971.1|,2697049,g14737,i0,100,100,259,0,100,0,1,259,7778,7520,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,25900,479,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
22497152,PRJNA825466_P_NODE_1718_length_532_cov_2.583878_g1619_i0,PRJNA825466,1718,532,2.583878,13.74623096,Betacoronavirus pandemicum,3418604,Viruses,Viruses,983,0,,NTclustered,gi|2499447400|emb|OX492971.1|,2697049,g1619,i0,100,100,532,0,100,0,1,532,10702,10171,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,53200,983,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
23772842,PRJNA825466_P_NODE_179_length_1487_cov_3.049505_g141_i0,PRJNA825466,179,1487,3.049505,45.34613935,Betacoronavirus pandemicum,3418604,Viruses,Viruses,2747,0,,NTclustered,gi|2057772748|emb|OU240649.1|,2697049,g141,i0,100,100,1487,0,100,0,1,1487,9666,8180,"Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1",blastn,148700,2747,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
23772873,PRJNA825466_P_NODE_319_length_1138_cov_2.790610_g255_i0,PRJNA825466,319,1138,2.79061,31.7571418,Betacoronavirus pandemicum,3418604,Viruses,Viruses,2097,0,,NTclustered,gi|2190424604|gb|OM565997.1|,2697049,g255,i0,99.912,100,1138,1,100,0,1,1138,16560,17697,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CA-CDC-ASC210538513/2022 ORF1ab polyprotein (ORF1ab) and ORF1a polyprotein (ORF1ab) genes, partial cds; and surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds",blastn,113800,2097,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
25046709,PRJNA825466_P_NODE_13640_length_266_cov_0.917098_g13539_i0,PRJNA825466,13640,266,0.917098,2.43948068,Betacoronavirus pandemicum,3418604,Viruses,Viruses,464,2.64e-126,,NTclustered,gi|2892074031|gb|PQ981157.1|,2697049,g13539,i0,98.12,100,266,5,100,0,1,266,26315,26580,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/FRA/21082240639/2021 ORF1ab polyprotein (ORF1ab) and ORF1a polyprotein (ORF1ab) genes, partial cds; and surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds",blastn,26600,464,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
25046727,PRJNA825466_P_NODE_1740_length_529_cov_1.675439_g1641_i0,PRJNA825466,1740,529,1.675439,8.86307231,Betacoronavirus pandemicum,3418604,Viruses,Viruses,977,0,,NTclustered,gi|2028980905|gb|MZ002360.1|,2697049,g1641,i0,100,100,529,0,100,0,1,529,24392,23864,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-LC0038184/2021, complete genome",blastn,52900,977,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
25046749,PRJNA825466_P_NODE_240_length_1287_cov_2.767710_g192_i0,PRJNA825466,240,1287,2.76771,35.6204277,Betacoronavirus pandemicum,3418604,Viruses,Viruses,2377,0,,NTclustered,gi|2200613490|gb|OM853158.1|,2697049,g192,i0,100,100,1287,0,100,0,1,1287,19514,18228,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/TN-CDC-ASC210555134/2022, complete genome",blastn,128700,2377,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
25046776,PRJNA825466_P_NODE_380_length_1063_cov_2.271717_g311_i0,PRJNA825466,380,1063,2.271717,24.14835171,Betacoronavirus pandemicum,3418604,Viruses,Viruses,1964,0,,NTclustered,gi|2089843528|emb|OU594278.1|,2697049,g311,i0,100,100,1063,0,100,0,1,1063,11751,12813,"Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite",blastn,106300,1964,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum
25046808,PRJNA825466_P_NODE_9980_length_288_cov_2.469767_g9879_i0,PRJNA825466,9980,288,2.469767,7.11292896,Betacoronavirus pandemicum,3418604,Viruses,Viruses,532,7.8e-147,,NTclustered,gi|2099506492|gb|OK254697.1|,2697049,g9879,i0,100,100,288,0,100,0,1,288,5664,5951,"Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/UT-UPHL-210921774045/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes, complete cds",blastn,28800,532,1,Viruses,,Orthornavirae,Pisuviricota,Pisoniviricetes,Nidovirales,Coronaviridae,Betacoronavirus,Betacoronavirus pandemicum