viruses_fish_associated_curated
22 rows where tax_species_NTorNR = "Astyanax tetra cavefish adintovirus"
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| Link | rowid ▼ | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
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| 9980 | 9980 | PRJNA1192682_CONTIG_12274|Astyanax_tetra_cavefish_adintovirus|CLUSTER1_Adintovirus_anguilla1|13|12 | Adintovirus anguilla10665 | Endogenous or not fish-associated | PRJNA1192682_CONTIG_12274|Astyanax_tetra_cavefish_adintovirus | PRJNA1192682_CONTIG_12274 | Adintovirus anguilla1 | 34 | 19 | 10 | CLUSTER1_Adintovirus_anguilla1|13|12 | PRJNA1034995_S_NODE_18603_length_409_cov_23.456284_g18448_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.59e-05|NA | 13 | 12 | PRJNA1192682 | 12274 | 157 | 1.649123 | 2.58912311 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 46.2 | 0.000317 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1192682_S_NODE_12274_length_157_cov_1.649123_g12241_i0 | DAC81254.1 TPA_asm: cupiennin [Astyanax tetra cavefish adintovirus] | DAC81254.1 | 2609866 | g12241 | i0 | 79.2 | 0.458598726 | 24 | 5 | 45.9 | 0 | 151 | 80 | 19 | 42 | 72 | 46.2 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Adintovirus anguilla10665 | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 46.2 | 0.000317 | ||||||||
| 9983 | 9983 | PRJNA944406_CONTIG_15085|Astyanax_tetra_cavefish_adintovirus|CLUSTER1_Adintovirus_anguilla1|13|12 | Adintovirus anguilla10665 | Endogenous or not fish-associated | PRJNA944406_CONTIG_15085|Astyanax_tetra_cavefish_adintovirus | PRJNA944406_CONTIG_15085 | Adintovirus anguilla1 | 34 | 19 | 10 | CLUSTER1_Adintovirus_anguilla1|13|12 | PRJNA1034995_S_NODE_18603_length_409_cov_23.456284_g18448_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.59e-05|NA | 13 | 12 | PRJNA944406 | 15085 | 331 | 0.751938 | 2.48891478 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 110.0 | 2.63e-28 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA944406_P_NODE_15085_length_331_cov_0.751938_g14126_i0 | DAC81254.1 TPA_asm: cupiennin [Astyanax tetra cavefish adintovirus] | DAC81254.1 | 2609866 | g14126 | i0 | 60.7 | 1.432024169 | 84 | 33 | 76.1 | 0 | 252 | 1 | 6 | 89 | 474 | 110.0 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Adintovirus anguilla10665 | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 110.0 | 2.63e-28 | ||||||||
| 9987 | 9987 | PRJNA1034995_CONTIG_18603|Astyanax_tetra_cavefish_adintovirus|CLUSTER1_Adintovirus_anguilla1|13|12 | Adintovirus anguilla10665 | Endogenous or not fish-associated | PRJNA1034995_CONTIG_18603|Astyanax_tetra_cavefish_adintovirus | PRJNA1034995_CONTIG_18603 | Adintovirus anguilla1 | 34 | 19 | 10 | CLUSTER1_Adintovirus_anguilla1|13|12 | PRJNA1034995_S_NODE_18603_length_409_cov_23.456284_g18448_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.59e-05|NA | 13 | 12 | PRJNA1034995 | 18603 | 409 | 23.456284 | 95.93620156 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 52.8 | 1.59e-05 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1034995_S_NODE_18603_length_409_cov_23.456284_g18448_i0 | DAC81254.1 TPA_asm: cupiennin [Astyanax tetra cavefish adintovirus] | DAC81254.1 | 2609866 | g18448 | i0 | 75.0 | 0.205378973 | 28 | 7 | 20.5 | 0 | 201 | 284 | 15 | 42 | 84 | 52.8 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Adintovirus anguilla10665 | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 52.8 | 1.59e-05 | ||||||||
| 9991 | 9991 | PRJNA1233465d_CONTIG_29194|Astyanax_tetra_cavefish_adintovirus|CLUSTER1_Adintovirus_anguilla1|13|12 | Adintovirus anguilla10665 | Endogenous or not fish-associated | PRJNA1233465d_CONTIG_29194|Astyanax_tetra_cavefish_adintovirus | PRJNA1233465d_CONTIG_29194 | Adintovirus anguilla1 | 34 | 19 | 10 | CLUSTER1_Adintovirus_anguilla1|13|12 | PRJNA1034995_S_NODE_18603_length_409_cov_23.456284_g18448_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.59e-05|NA | 13 | 12 | PRJNA1233465d | 29194 | 306 | 2.59144 | 7.9298064 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 57.4 | 3.59e-07 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1233465d_S_NODE_29194_length_306_cov_2.591440_g28083_i0 | DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] | DAC81253.1 | 2609866 | g28083 | i0 | 55.1 | 0.980392157 | 49 | 22 | 48.0 | 0 | 42 | 188 | 131 | 179 | 300 | 57.4 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Adintovirus anguilla10665 | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 57.4 | 3.59e-07 | ||||||||
| 9992 | 9992 | PRJNA1044115_CONTIG_29670|Astyanax_tetra_cavefish_adintovirus|CLUSTER1_Adintovirus_anguilla1|13|12 | Adintovirus anguilla10665 | Endogenous or not fish-associated | PRJNA1044115_CONTIG_29670|Astyanax_tetra_cavefish_adintovirus | PRJNA1044115_CONTIG_29670 | Adintovirus anguilla1 | 34 | 19 | 10 | CLUSTER1_Adintovirus_anguilla1|13|12 | PRJNA1034995_S_NODE_18603_length_409_cov_23.456284_g18448_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.59e-05|NA | 13 | 12 | PRJNA1044115 | 29670 | 270 | 1.152284 | 3.1111668 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 110.0 | 1.1200000000000001e-27 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1044115_P_NODE_29670_length_270_cov_1.152284_g29486_i0 | DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] | DAC81253.1 | 2609866 | g29486 | i0 | 60.4 | 1.011111111 | 91 | 34 | 98.9 | 1 | 2 | 268 | 135 | 225 | 273 | 110.0 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Adintovirus anguilla10665 | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 110.0 | 1.1200000000000001e-27 | ||||||||
| 10135 | 10135 | PRJNA1057153_CONTIG_16964|Astyanax_tetra_cavefish_adintovirus|CLUSTER1_Astyanax_tetra_cavefish_adintovirus|7|6 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1057153_CONTIG_16964|Astyanax_tetra_cavefish_adintovirus | PRJNA1057153_CONTIG_16964 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER1_Astyanax_tetra_cavefish_adintovirus|7|6 | PRJNA1150539_S_NODE_13470_length_412_cov_4.790560_g12875_i0|Polintoviricetes|NR|4.65e-24|NA | 7 | 6 | PRJNA1057153 | 16964 | 179 | 1.382353 | 2.47441187 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 55.5 | 3.07e-07 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1057153_S_NODE_16964_length_179_cov_1.382353_g16809_i0 | DAC81259.1 TPA_asm: FtsK [Astyanax tetra cavefish adintovirus] | DAC81259.1 | 2609866 | g16809 | i0 | 80.0 | 0.502793296 | 30 | 6 | 50.3 | 0 | 1 | 90 | 191 | 220 | 90 | 55.5 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 55.5 | 3.07e-07 | ||||||||
| 10146 | 10146 | PRJNA999234_CONTIG_47550|Astyanax_tetra_cavefish_adintovirus|CLUSTER1_Astyanax_tetra_cavefish_adintovirus|7|6 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA999234_CONTIG_47550|Astyanax_tetra_cavefish_adintovirus | PRJNA999234_CONTIG_47550 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER1_Astyanax_tetra_cavefish_adintovirus|7|6 | PRJNA1150539_S_NODE_13470_length_412_cov_4.790560_g12875_i0|Polintoviricetes|NR|4.65e-24|NA | 7 | 6 | PRJNA999234 | 47550 | 173 | 1.807692 | 3.12730716 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 96.3 | 7.269999999999999e-23 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA999234_S_NODE_47550_length_173_cov_1.807692_g46978_i0 | DAC81259.1 TPA_asm: FtsK [Astyanax tetra cavefish adintovirus] | DAC81259.1 | 2609866 | g46978 | i0 | 81.8 | 1.89017341 | 55 | 10 | 95.4 | 0 | 1 | 165 | 115 | 169 | 327 | 96.3 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 96.3 | 7.269999999999999e-23 | ||||||||
| 10148 | 10148 | PRJNA1241156_CONTIG_71844|Astyanax_tetra_cavefish_adintovirus|CLUSTER1_Astyanax_tetra_cavefish_adintovirus|7|6 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1241156_CONTIG_71844|Astyanax_tetra_cavefish_adintovirus | PRJNA1241156_CONTIG_71844 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER1_Astyanax_tetra_cavefish_adintovirus|7|6 | PRJNA1150539_S_NODE_13470_length_412_cov_4.790560_g12875_i0|Polintoviricetes|NR|4.65e-24|NA | 7 | 6 | PRJNA1241156 | 71844 | 221 | 4.292135 | 9.48561835 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 59.7 | 1.4e-08 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1241156_S_NODE_71844_length_221_cov_4.292135_g71384_i0 | DAC81259.1 TPA_asm: FtsK [Astyanax tetra cavefish adintovirus] | DAC81259.1 | 2609866 | g71384 | i0 | 72.2 | 0.488687783 | 36 | 10 | 48.9 | 0 | 8 | 115 | 185 | 220 | 108 | 59.7 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 59.7 | 1.4e-08 | ||||||||
| 10153 | 10153 | PRJNA996565_CONTIG_1527|Astyanax_tetra_cavefish_adintovirus|CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA996565_CONTIG_1527|Astyanax_tetra_cavefish_adintovirus | PRJNA996565_CONTIG_1527 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | PRJNA1034995_S_NODE_12562_length_616_cov_22.815009_g12451_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.35e-05|NA | 6 | 5 | PRJNA996565 | 1527 | 255 | 1.542453 | 3.93325515 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 46.6 | 0.000809 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA996565_S_NODE_1527_length_255_cov_1.542453_g1476_i0 | DAC81251.1 TPA_asm: Bcl2 [Astyanax tetra cavefish adintovirus] | DAC81251.1 | 2609866 | g1476 | i0 | 29.7 | 0.752941176 | 64 | 45 | 75.3 | 0 | 40 | 231 | 65 | 128 | 192 | 46.6 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 46.6 | 0.000809 | ||||||||
| 10157 | 10157 | PRJNA1249042_CONTIG_6702|Astyanax_tetra_cavefish_adintovirus|CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1249042_CONTIG_6702|Astyanax_tetra_cavefish_adintovirus | PRJNA1249042_CONTIG_6702 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | PRJNA1034995_S_NODE_12562_length_616_cov_22.815009_g12451_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.35e-05|NA | 6 | 5 | PRJNA1249042 | 6702 | 345 | 3.056291 | 10.54420395 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 43.9 | 0.0199 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1249042_S_NODE_6702_length_345_cov_3.056291_g6488_i0 | DAC81251.1 TPA_asm: Bcl2 [Astyanax tetra cavefish adintovirus] | DAC81251.1 | 2609866 | g6488 | i0 | 22.4 | 0.660869565 | 76 | 59 | 66.1 | 0 | 250 | 23 | 65 | 140 | 228 | 43.9 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 43.9 | 0.0199 | ||||||||
| 10160 | 10160 | PRJNA1034995_CONTIG_12562|Astyanax_tetra_cavefish_adintovirus|CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1034995_CONTIG_12562|Astyanax_tetra_cavefish_adintovirus | PRJNA1034995_CONTIG_12562 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | PRJNA1034995_S_NODE_12562_length_616_cov_22.815009_g12451_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.35e-05|NA | 6 | 5 | PRJNA1034995 | 12562 | 616 | 22.815009 | 140.5404554 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 54.7 | 1.35e-05 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1034995_S_NODE_12562_length_616_cov_22.815009_g12451_i0 | DAC81251.1 TPA_asm: Bcl2 [Astyanax tetra cavefish adintovirus] | DAC81251.1 | 2609866 | g12451 | i0 | 24.3 | 0.701298701 | 144 | 105 | 70.1 | 3 | 538 | 107 | 1 | 140 | 432 | 54.7 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 54.7 | 1.35e-05 | ||||||||
| 10161 | 10161 | PRJNA1034995_CONTIG_13340|Astyanax_tetra_cavefish_adintovirus|CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1034995_CONTIG_13340|Astyanax_tetra_cavefish_adintovirus | PRJNA1034995_CONTIG_13340 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | PRJNA1034995_S_NODE_12562_length_616_cov_22.815009_g12451_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.35e-05|NA | 6 | 5 | PRJNA1034995 | 13340 | 559 | 23.831395 | 133.2174981 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 50.1 | 0.000487 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1034995_S_NODE_13340_length_559_cov_23.831395_g13201_i0 | DAC81251.1 TPA_asm: Bcl2 [Astyanax tetra cavefish adintovirus] | DAC81251.1 | 2609866 | g13201 | i0 | 31.4 | 0.547406082 | 102 | 67 | 54.7 | 2 | 532 | 227 | 26 | 124 | 306 | 50.1 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 50.1 | 0.000487 | ||||||||
| 10163 | 10163 | PRJNA1115053_CONTIG_84497|Astyanax_tetra_cavefish_adintovirus|CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1115053_CONTIG_84497|Astyanax_tetra_cavefish_adintovirus | PRJNA1115053_CONTIG_84497 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER2_Astyanax_tetra_cavefish_adintovirus|6|5 | PRJNA1034995_S_NODE_12562_length_616_cov_22.815009_g12451_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.35e-05|NA | 6 | 5 | PRJNA1115053 | 84497 | 277 | 1.747863 | 4.84158051 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 45.1 | 0.00388 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1115053_S_NODE_84497_length_277_cov_1.747863_g82680_i0 | DAC81251.1 TPA_asm: Bcl2 [Astyanax tetra cavefish adintovirus] | DAC81251.1 | 2609866 | g82680 | i0 | 26.6 | 0.693140794 | 64 | 47 | 69.3 | 0 | 25 | 216 | 65 | 128 | 192 | 45.1 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 45.1 | 0.00388 | ||||||||
| 10219 | 10219 | PRJNA970658_CONTIG_30532|Astyanax_tetra_cavefish_adintovirus|CLUSTER3_Astyanax_tetra_cavefish_adintovirus|3|3 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA970658_CONTIG_30532|Astyanax_tetra_cavefish_adintovirus | PRJNA970658_CONTIG_30532 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER3_Astyanax_tetra_cavefish_adintovirus|3|3 | PRJNA1150539_S_NODE_33506_length_344_cov_2.450185_g32910_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.21e-43|NA | 2 | 2 | PRJNA970658 | 30532 | 245 | 0.883721 | 2.16511645 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 72.0 | 1.48e-12 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA970658_P_NODE_30532_length_245_cov_0.883721_g30290_i0 | DAC81252.1 TPA_asm: integrase [Astyanax tetra cavefish adintovirus] | DAC81252.1 | 2609866 | g30290 | i0 | 64.2 | 1.236734694 | 53 | 19 | 64.9 | 0 | 242 | 84 | 192 | 244 | 303 | 72.0 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 72.0 | 1.48e-12 | ||||||||
| 10220 | 10220 | PRJNA1233465e_CONTIG_32714|Astyanax_tetra_cavefish_adintovirus|CLUSTER4_Astyanax_tetra_cavefish_adintovirus|3|3 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1233465e_CONTIG_32714|Astyanax_tetra_cavefish_adintovirus | PRJNA1233465e_CONTIG_32714 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER4_Astyanax_tetra_cavefish_adintovirus|3|3 | PRJNA1233465e_S_NODE_32714_length_308_cov_4.830116_g31404_i0|Astyanax_tetra_cavefish_adintovirus|NR|3.71e-07|NA | 3 | 3 | PRJNA1233465e | 32714 | 308 | 4.830116 | 14.87675728 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 57.4 | 3.71e-07 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1233465e_S_NODE_32714_length_308_cov_4.830116_g31404_i0 | DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] | DAC81253.1 | 2609866 | g31404 | i0 | 55.1 | 0.974025974 | 49 | 22 | 47.7 | 0 | 265 | 119 | 131 | 179 | 300 | 57.4 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 57.4 | 3.71e-07 | ||||||||
| 10221 | 10221 | PRJNA1150539_CONTIG_33506|Astyanax_tetra_cavefish_adintovirus|CLUSTER3_Astyanax_tetra_cavefish_adintovirus|3|3 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1150539_CONTIG_33506|Astyanax_tetra_cavefish_adintovirus | PRJNA1150539_CONTIG_33506 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER3_Astyanax_tetra_cavefish_adintovirus|3|3 | PRJNA1150539_S_NODE_33506_length_344_cov_2.450185_g32910_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.21e-43|NA | 2 | 2 | PRJNA1150539 | 33506 | 344 | 2.450185 | 8.4286364 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 155.0 | 1.21e-43 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1150539_S_NODE_33506_length_344_cov_2.450185_g32910_i0 | DAC81252.1 TPA_asm: integrase [Astyanax tetra cavefish adintovirus] | DAC81252.1 | 2609866 | g32910 | i0 | 74.0 | 2.625 | 100 | 26 | 87.2 | 0 | 309 | 10 | 145 | 244 | 903 | 155.0 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 155.0 | 1.21e-43 | ||||||||
| 10222 | 10222 | PRJNA1233465f_CONTIG_55222|Astyanax_tetra_cavefish_adintovirus|CLUSTER4_Astyanax_tetra_cavefish_adintovirus|3|3 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1233465f_CONTIG_55222|Astyanax_tetra_cavefish_adintovirus | PRJNA1233465f_CONTIG_55222 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER4_Astyanax_tetra_cavefish_adintovirus|3|3 | PRJNA1233465e_S_NODE_32714_length_308_cov_4.830116_g31404_i0|Astyanax_tetra_cavefish_adintovirus|NR|3.71e-07|NA | 3 | 3 | PRJNA1233465f | 55222 | 307 | 6.205426 | 19.05065782 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 57.4 | 3.71e-07 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1233465f_S_NODE_55222_length_307_cov_6.205426_g52942_i0 | DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] | DAC81253.1 | 2609866 | g52942 | i0 | 55.1 | 0.977198697 | 49 | 22 | 47.9 | 0 | 264 | 118 | 131 | 179 | 300 | 57.4 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 57.4 | 3.71e-07 | ||||||||
| 10245 | 10245 | PRJNA638138_CONTIG_2716|Astyanax_tetra_cavefish_adintovirus|CLUSTER3_Adintovirus_anguilla1|2|1 | Adintovirus anguilla10665 | Endogenous or not fish-associated | PRJNA638138_CONTIG_2716|Astyanax_tetra_cavefish_adintovirus | PRJNA638138_CONTIG_2716 | Adintovirus anguilla1 | 34 | 19 | 10 | CLUSTER3_Adintovirus_anguilla1|2|1 | PRJNA638138_P_NODE_2716_length_580_cov_0.962525_g2504_i0|Astyanax_tetra_cavefish_adintovirus|NR|5.26e-35|NA | 2 | 1 | PRJNA638138 | 2716 | 580 | 0.962525 | 5.582645 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 134.0 | 5.26e-35 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA638138_P_NODE_2716_length_580_cov_0.962525_g2504_i0 | DAC81257.1 TPA_asm: acintoc2 [Astyanax tetra cavefish adintovirus] | DAC81257.1 | 2609866 | g2504 | i0 | 45.9 | 0.765517241 | 148 | 73 | 72.9 | 1 | 579 | 157 | 106 | 253 | 444 | 134.0 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Adintovirus anguilla10665 | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 134.0 | 5.26e-35 | ||||||||
| 10369 | 10369 | PRJNA638138_CONTIG_3941|Astyanax_tetra_cavefish_adintovirus|CLUSTER5_Astyanax_tetra_cavefish_adintovirus|1|1 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA638138_CONTIG_3941|Astyanax_tetra_cavefish_adintovirus | PRJNA638138_CONTIG_3941 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER5_Astyanax_tetra_cavefish_adintovirus|1|1 | PRJNA638138_P_NODE_3941_length_487_cov_1.101449_g3727_i0|Astyanax_tetra_cavefish_adintovirus|NR|2.38e-09|NA | 1 | 1 | PRJNA638138 | 3941 | 487 | 1.101449 | 5.36405663 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 66.2 | 2.38e-09 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA638138_P_NODE_3941_length_487_cov_1.101449_g3727_i0 | DAC81252.1 TPA_asm: integrase [Astyanax tetra cavefish adintovirus] | DAC81252.1 | 2609866 | g3727 | i0 | 50.9 | 1.016427105 | 55 | 27 | 33.9 | 0 | 321 | 485 | 1 | 55 | 495 | 66.6 | 0.993993994 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 66.2 | 2.38e-09 | ||||||||
| 10422 | 10422 | PRJNA638138_CONTIG_20605|Astyanax_tetra_cavefish_adintovirus|CLUSTER6_Astyanax_tetra_cavefish_adintovirus|1|1 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA638138_CONTIG_20605|Astyanax_tetra_cavefish_adintovirus | PRJNA638138_CONTIG_20605 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER6_Astyanax_tetra_cavefish_adintovirus|1|1 | PRJNA638138_P_NODE_20605_length_250_cov_0.870056_g20390_i0|Astyanax_tetra_cavefish_adintovirus|NR|0.0223|NA | 1 | 1 | PRJNA638138 | 20605 | 250 | 0.870056 | 2.17514 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 42.0 | 0.0223 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA638138_P_NODE_20605_length_250_cov_0.870056_g20390_i0 | DAC81258.1 TPA_asm: gasderminX [Astyanax tetra cavefish adintovirus] | DAC81258.1 | 2609866 | g20390 | i0 | 58.1 | 0.372 | 31 | 13 | 37.2 | 0 | 95 | 3 | 33 | 63 | 93 | 42.0 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 42.0 | 0.0223 | ||||||||
| 10432 | 10432 | PRJNA638138_CONTIG_25250|Astyanax_tetra_cavefish_adintovirus|CLUSTER7_Astyanax_tetra_cavefish_adintovirus|1|1 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA638138_CONTIG_25250|Astyanax_tetra_cavefish_adintovirus | PRJNA638138_CONTIG_25250 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER7_Astyanax_tetra_cavefish_adintovirus|1|1 | PRJNA638138_P_NODE_25250_length_247_cov_1.034483_g25035_i0|Astyanax_tetra_cavefish_adintovirus|NR|3.31e-14|NA | 1 | 1 | PRJNA638138 | 25250 | 247 | 1.034483 | 2.55517301 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 75.5 | 3.31e-14 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA638138_P_NODE_25250_length_247_cov_1.034483_g25035_i0 | DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] | DAC81253.1 | 2609866 | g25035 | i0 | 66.0 | 0.607287449 | 50 | 17 | 60.7 | 0 | 151 | 2 | 1 | 50 | 150 | 75.5 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 75.5 | 3.31e-14 | ||||||||
| 10486 | 10486 | PRJNA1233465f_CONTIG_194813|Astyanax_tetra_cavefish_adintovirus|CLUSTER8_Astyanax_tetra_cavefish_adintovirus|1|1 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA1233465f_CONTIG_194813|Astyanax_tetra_cavefish_adintovirus | PRJNA1233465f_CONTIG_194813 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER8_Astyanax_tetra_cavefish_adintovirus|1|1 | PRJNA1233465f_S_NODE_194813_length_180_cov_0.984733_g192533_i0|Astyanax_tetra_cavefish_adintovirus|NR|4.33e-12|NA | 1 | 1 | PRJNA1233465f | 194813 | 180 | 0.984733 | 1.7725194 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 69.7 | 4.33e-12 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA1233465f_S_NODE_194813_length_180_cov_0.984733_g192533_i0 | DAC81252.1 TPA_asm: integrase [Astyanax tetra cavefish adintovirus] | DAC81252.1 | 2609866 | g192533 | i0 | 65.2 | 0.766666667 | 46 | 16 | 76.7 | 0 | 43 | 180 | 263 | 308 | 138 | 69.7 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 69.7 | 4.33e-12 |
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CREATE TABLE viruses_fish_associated_curated(contig_withLCA_withcluster VARCHAR, clusterLCA_curated VARCHAR, Category VARCHAR, contig_withLCA VARCHAR, shortcontigname VARCHAR, clusterLCA VARCHAR, clusterLCAcurated_contigcount BIGINT, clusterLCAcurated_bioprojectcount BIGINT, clusterLCAcurated_clustercount BIGINT, shortclustername VARCHAR, "cluster" VARCHAR, clustersize BIGINT, bioprojectsbycluster BIGINT, bioproject VARCHAR, node BIGINT, length BIGINT, coverage DOUBLE, rel_abundance DOUBLE, taxname_lca_NTorNR VARCHAR, taxid_lca_NTorNR BIGINT, taxoncategory_NTorNR VARCHAR, taxoncategorysimple_NTorNR VARCHAR, bits_NTorNR DOUBLE, evalue_NTorNR DOUBLE, viruscategory_NTorNR VARCHAR, viruscategorysimple_NTorNR VARCHAR, analysis_used VARCHAR, contig_name VARCHAR, lowcoverage_flag DOUBLE, target_title_NTorNR VARCHAR, target_NTorNR VARCHAR, taxid_NTorNR BIGINT, gene_NTorNR VARCHAR, allele_NTorNR VARCHAR, pident_NTorNR DOUBLE, sumperc_cov_NTorNR DOUBLE, alnlen_NTorNR BIGINT, mismatch_NTorNR BIGINT, qcov_NTorNR DOUBLE, gapopen_NTorNR BIGINT, qstart_NTorNR BIGINT, qend_NTorNR BIGINT, tstart_NTorNR BIGINT, tend_NTorNR BIGINT, sumalnlen_NTorNR BIGINT, maxbits_NTorNR DOUBLE, bits_percmax_NTorNR DOUBLE, tax_superkingdom_NTorNR VARCHAR, tax_clade_NTorNR VARCHAR, tax_kingdom_NTorNR VARCHAR, tax_phylum_NTorNR VARCHAR, tax_class_NTorNR VARCHAR, tax_order_NTorNR VARCHAR, tax_family_NTorNR VARCHAR, tax_genus_NTorNR VARCHAR, tax_species_NTorNR VARCHAR, classification VARCHAR, taxname_lca_NTclustered VARCHAR, taxname_lca_NR VARCHAR, target_NTclustered VARCHAR, taxoncategory_NTclustered VARCHAR, taxoncategory_NR VARCHAR, taxoncategorysimple_NTclustered VARCHAR, taxoncategorysimple_NR VARCHAR, bits_NTclustered DOUBLE, bits_NR DOUBLE, evalue_NTclustered DOUBLE, evalue_NR DOUBLE);; CREATE INDEX idx_vfac_bioproject ON viruses_fish_associated_curated(bioproject);; CREATE INDEX idx_vfac_category ON viruses_fish_associated_curated(Category);; CREATE INDEX idx_vfac_clusterLCA_curated ON viruses_fish_associated_curated(clusterLCA_curated);; CREATE INDEX idx_vfac_tax_family ON viruses_fish_associated_curated(tax_family_NTorNR);; CREATE INDEX idx_vfac_tax_genus ON viruses_fish_associated_curated(tax_genus_NTorNR);; CREATE INDEX idx_vfac_tax_species ON viruses_fish_associated_curated(tax_species_NTorNR);;