metadata: viruses_fish_associated_curated: 4 rows where tax_family_NTorNR = "Picornaviridae" and tax_species_NTorNR = "Asterropteryx spinosa picornavirus"

4 rows where tax_family_NTorNR = "Picornaviridae" and tax_species_NTorNR = "Asterropteryx spinosa picornavirus"

descending

Link	rowid ▼	contig_withLCA_withcluster	clusterLCA_curated	Category	contig_withLCA	shortcontigname	clusterLCA	clusterLCAcurated_contigcount	clusterLCAcurated_bioprojectcount	clusterLCAcurated_clustercount	shortclustername	cluster	clustersize	bioprojectsbycluster	bioproject	node	length	coverage	rel_abundance	taxname_lca_NTorNR	taxid_lca_NTorNR	taxoncategory_NTorNR	taxoncategorysimple_NTorNR	bits_NTorNR	evalue_NTorNR	viruscategory_NTorNR	viruscategorysimple_NTorNR	analysis_used	contig_name	target_title_NTorNR	target_NTorNR	taxid_NTorNR	gene_NTorNR	allele_NTorNR	pident_NTorNR	sumperc_cov_NTorNR	alnlen_NTorNR	mismatch_NTorNR	qcov_NTorNR	gapopen_NTorNR	qstart_NTorNR	qend_NTorNR	tstart_NTorNR	tend_NTorNR	sumalnlen_NTorNR	maxbits_NTorNR	bits_percmax_NTorNR	tax_superkingdom_NTorNR	tax_clade_NTorNR	tax_kingdom_NTorNR	tax_phylum_NTorNR	tax_class_NTorNR	tax_order_NTorNR	tax_family_NTorNR	tax_species_NTorNR	classification	taxname_lca_NTclustered	taxname_lca_NR	target_NTclustered	taxoncategory_NTclustered	taxoncategory_NR	taxoncategorysimple_NTclustered	taxoncategorysimple_NR	bits_NTclustered	bits_NR	evalue_NTclustered	evalue_NR
2251	2251	PRJNA550048_CONTIG_661\|Asterropteryx_spinosa_picornavirus\|CLUSTER1_Zebrafish_picornavirus_2\|1382\|320	Danio blood picornavirus/Zebrafish picornavirus 2	Novel	PRJNA550048_CONTIG_661\|Asterropteryx_spinosa_picornavirus	PRJNA550048_CONTIG_661	Zebrafish picornavirus 2	1369	320	1	CLUSTER1_Zebrafish_picornavirus_2\|1382\|320	PRJNA924006_P_NODE_1_length_7278_cov_16.682998_g0_i0\|Zebrafish_picornavirus_2\|NR\|0\|NA	1370	320	PRJNA550048	661	521	1.857143	9.67571503	Asterropteryx spinosa picornavirus	2951495	Viruses	Viruses	117.0	7.39e-27	Asterropteryx spinosa picornavirus	Non-phage	NR	PRJNA550048_P_NODE_661_length_521_cov_1.857143_g568_i0	UVF58820.1 MAG: polyprotein [Asterropteryx spinosa picornavirus]	UVF58820.1	2951495	g568	i0	42.6	3.742802303	183	85	98.5	7	7	519	829	1003	1950	117.0	1.0	Viruses	Riboviria	Orthornavirae	Pisuviricota	Pisoniviricetes	Picornavirales	Picornaviridae	Asterropteryx spinosa picornavirus	Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Danio blood picornavirus/Zebrafish picornavirus 2		Asterropteryx spinosa picornavirus			Viruses		Viruses		117.0		7.39e-27
2760	2760	PRJNA774958_CONTIG_6424\|Asterropteryx_spinosa_picornavirus\|CLUSTER1_Zebrafish_picornavirus_2\|1382\|320	Danio blood picornavirus/Zebrafish picornavirus 2	Novel	PRJNA774958_CONTIG_6424\|Asterropteryx_spinosa_picornavirus	PRJNA774958_CONTIG_6424	Zebrafish picornavirus 2	1369	320	1	CLUSTER1_Zebrafish_picornavirus_2\|1382\|320	PRJNA924006_P_NODE_1_length_7278_cov_16.682998_g0_i0\|Zebrafish_picornavirus_2\|NR\|0\|NA	1370	320	PRJNA774958	6424	648	2.01913	13.0839624	Asterropteryx spinosa picornavirus	2951495	Viruses	Viruses	124.0	1.66e-28	Asterropteryx spinosa picornavirus	Non-phage	NR	PRJNA774958_P_NODE_6424_length_648_cov_2.019130_g6196_i0	UVF58820.1 MAG: polyprotein [Asterropteryx spinosa picornavirus]	UVF58820.1	2951495	g6196	i0	41.4	1.699074074	191	92	82.9	7	537	1	829	1011	1101	124.0	1.0	Viruses	Riboviria	Orthornavirae	Pisuviricota	Pisoniviricetes	Picornavirales	Picornaviridae	Asterropteryx spinosa picornavirus	Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Danio blood picornavirus/Zebrafish picornavirus 2		Asterropteryx spinosa picornavirus			Viruses		Viruses		124.0		1.66e-28
2880	2880	PRJNA482207_CONTIG_10617\|Asterropteryx_spinosa_picornavirus\|CLUSTER1_Zebrafish_picornavirus_2\|1382\|320	Danio blood picornavirus/Zebrafish picornavirus 2	Novel	PRJNA482207_CONTIG_10617\|Asterropteryx_spinosa_picornavirus	PRJNA482207_CONTIG_10617	Zebrafish picornavirus 2	1369	320	1	CLUSTER1_Zebrafish_picornavirus_2\|1382\|320	PRJNA924006_P_NODE_1_length_7278_cov_16.682998_g0_i0\|Zebrafish_picornavirus_2\|NR\|0\|NA	1370	320	PRJNA482207	10617	323	1.232	3.97936	Asterropteryx spinosa picornavirus	2951495	Viruses	Viruses	85.9	7.23e-17	Asterropteryx spinosa picornavirus	Non-phage	NR	PRJNA482207_P_NODE_10617_length_323_cov_1.232000_g10507_i0	UVF58820.1 MAG: polyprotein [Asterropteryx spinosa picornavirus]	UVF58820.1	2951495	g10507	i0	69.4	0.575851393	62	17	55.7	1	128	307	829	890	186	85.9	1.0	Viruses	Riboviria	Orthornavirae	Pisuviricota	Pisoniviricetes	Picornavirales	Picornaviridae	Asterropteryx spinosa picornavirus	Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Danio blood picornavirus/Zebrafish picornavirus 2		Asterropteryx spinosa picornavirus			Viruses		Viruses		85.9		7.23e-17
3067	3067	PRJNA1163532_CONTIG_32684\|Asterropteryx_spinosa_picornavirus\|CLUSTER1_Zebrafish_picornavirus_2\|1382\|320	Danio blood picornavirus/Zebrafish picornavirus 2	Novel	PRJNA1163532_CONTIG_32684\|Asterropteryx_spinosa_picornavirus	PRJNA1163532_CONTIG_32684	Zebrafish picornavirus 2	1369	320	1	CLUSTER1_Zebrafish_picornavirus_2\|1382\|320	PRJNA924006_P_NODE_1_length_7278_cov_16.682998_g0_i0\|Zebrafish_picornavirus_2\|NR\|0\|NA	1370	320	PRJNA1163532	32684	288	1.680365	4.8394512	Asterropteryx spinosa picornavirus	2951495	Viruses	Viruses	83.6	2.92e-16	Asterropteryx spinosa picornavirus	Non-phage	NR	PRJNA1163532_P_NODE_32684_length_288_cov_1.680365_g32460_i0	UVF58820.1 MAG: polyprotein [Asterropteryx spinosa picornavirus]	UVF58820.1	2951495	g32460	i0	67.2	0.604166667	58	17	58.3	1	119	286	829	886	174	83.6	1.0	Viruses	Riboviria	Orthornavirae	Pisuviricota	Pisoniviricetes	Picornavirales	Picornaviridae	Asterropteryx spinosa picornavirus	Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Danio blood picornavirus/Zebrafish picornavirus 2	Zebrafish picornavirus 2	Asterropteryx spinosa picornavirus	gi\|2551699335\|gb\|OK619588.1\|	Viruses	Viruses	Viruses	Viruses	60.2	83.6	0.000159	2.92e-16

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CREATE TABLE viruses_fish_associated_curated(contig_withLCA_withcluster VARCHAR, clusterLCA_curated VARCHAR, Category VARCHAR, contig_withLCA VARCHAR, shortcontigname VARCHAR, clusterLCA VARCHAR, clusterLCAcurated_contigcount BIGINT, clusterLCAcurated_bioprojectcount BIGINT, clusterLCAcurated_clustercount BIGINT, shortclustername VARCHAR, "cluster" VARCHAR, clustersize BIGINT, bioprojectsbycluster BIGINT, bioproject VARCHAR, node BIGINT, length BIGINT, coverage DOUBLE, rel_abundance DOUBLE, taxname_lca_NTorNR VARCHAR, taxid_lca_NTorNR BIGINT, taxoncategory_NTorNR VARCHAR, taxoncategorysimple_NTorNR VARCHAR, bits_NTorNR DOUBLE, evalue_NTorNR DOUBLE, viruscategory_NTorNR VARCHAR, viruscategorysimple_NTorNR VARCHAR, analysis_used VARCHAR, contig_name VARCHAR, lowcoverage_flag DOUBLE, target_title_NTorNR VARCHAR, target_NTorNR VARCHAR, taxid_NTorNR BIGINT, gene_NTorNR VARCHAR, allele_NTorNR VARCHAR, pident_NTorNR DOUBLE, sumperc_cov_NTorNR DOUBLE, alnlen_NTorNR BIGINT, mismatch_NTorNR BIGINT, qcov_NTorNR DOUBLE, gapopen_NTorNR BIGINT, qstart_NTorNR BIGINT, qend_NTorNR BIGINT, tstart_NTorNR BIGINT, tend_NTorNR BIGINT, sumalnlen_NTorNR BIGINT, maxbits_NTorNR DOUBLE, bits_percmax_NTorNR DOUBLE, tax_superkingdom_NTorNR VARCHAR, tax_clade_NTorNR VARCHAR, tax_kingdom_NTorNR VARCHAR, tax_phylum_NTorNR VARCHAR, tax_class_NTorNR VARCHAR, tax_order_NTorNR VARCHAR, tax_family_NTorNR VARCHAR, tax_genus_NTorNR VARCHAR, tax_species_NTorNR VARCHAR, classification VARCHAR, taxname_lca_NTclustered VARCHAR, taxname_lca_NR VARCHAR, target_NTclustered VARCHAR, taxoncategory_NTclustered VARCHAR, taxoncategory_NR VARCHAR, taxoncategorysimple_NTclustered VARCHAR, taxoncategorysimple_NR VARCHAR, bits_NTclustered DOUBLE, bits_NR DOUBLE, evalue_NTclustered DOUBLE, evalue_NR DOUBLE);;
CREATE INDEX idx_vfac_bioproject ON viruses_fish_associated_curated(bioproject);;
CREATE INDEX idx_vfac_category ON viruses_fish_associated_curated(Category);;
CREATE INDEX idx_vfac_clusterLCA_curated ON viruses_fish_associated_curated(clusterLCA_curated);;
CREATE INDEX idx_vfac_tax_family ON viruses_fish_associated_curated(tax_family_NTorNR);;
CREATE INDEX idx_vfac_tax_genus ON viruses_fish_associated_curated(tax_genus_NTorNR);;
CREATE INDEX idx_vfac_tax_species ON viruses_fish_associated_curated(tax_species_NTorNR);;