viruses_fish_associated_curated
13 rows where bioproject = "PRJNA944406"
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| Link | rowid ▼ | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
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| 3243 | 3243 | PRJNA944406_CONTIG_12|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_12|Cyprivirus_A | PRJNA944406_CONTIG_12 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 12 | 5028 | 91.640767 | 4607.697765 | Cyprivirus A | 2304617 | Viruses | Viruses | 8468.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_12_length_5028_cov_91.640767_g7_i0 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g7 | i0 | 97.076 | 3.050517104 | 5028 | 143 | 100.0 | 2 | 1 | 5028 | 8297 | 3274 | 15338 | 8468.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | Viruses | Viruses | 8468.0 | 2998.0 | 0.0 | 0.0 | ||
| 3244 | 3244 | PRJNA944406_CONTIG_13|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_13|Cyprivirus_A | PRJNA944406_CONTIG_13 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 13 | 5028 | 91.245207 | 4587.809008 | Cyprivirus A | 2304617 | Viruses | Viruses | 8414.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_13_length_5028_cov_91.245207_g7_i1 | Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome | gi|1812398529|gb|MN524064.1| | 2563826 | g7 | i1 | 96.879 | 3.050517104 | 5030 | 152 | 100.0 | 4 | 1 | 5028 | 3201 | 8227 | 15338 | 8414.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1812398529|gb|MN524064.1| | Viruses | Viruses | Viruses | Viruses | 8414.0 | 2992.0 | 0.0 | 0.0 | ||
| 3247 | 3247 | PRJNA944406_CONTIG_14|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_14|Cyprivirus_A | PRJNA944406_CONTIG_14 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 14 | 5028 | 90.563269 | 4553.521165 | Cyprivirus A | 2304617 | Viruses | Viruses | 8479.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_14_length_5028_cov_90.563269_g7_i2 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g7 | i2 | 97.116 | 3.050517104 | 5028 | 141 | 100.0 | 2 | 1 | 5028 | 8297 | 3274 | 15338 | 8479.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | Viruses | Viruses | 8479.0 | 3000.0 | 0.0 | 0.0 | ||
| 3249 | 3249 | PRJNA944406_CONTIG_15|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_15|Cyprivirus_A | PRJNA944406_CONTIG_15 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 15 | 5000 | 30.9178 | 1545.89 | Cyprivirus A | 2304617 | Viruses | Viruses | 8194.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_15_length_5000_cov_30.917800_g7_i3 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g7 | i3 | 96.242 | 2.9994 | 5003 | 184 | 100.0 | 4 | 1 | 5000 | 5069 | 68 | 14997 | 8194.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | Viruses | Viruses | 8194.0 | 2784.0 | 0.0 | 0.0 | ||
| 3267 | 3267 | PRJNA944406_CONTIG_68|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_68|Cyprivirus_A | PRJNA944406_CONTIG_68 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 68 | 3053 | 39.120805 | 1194.358177 | Cyprivirus A | 2304617 | Viruses | Viruses | 4937.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_68_length_3053_cov_39.120805_g7_i4 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | gi|1990739381|tpg|BK011179.1| | 2563826 | g7 | i4 | 95.844 | 3.003275467 | 3056 | 124 | 100.0 | 1 | 1 | 3053 | 2027 | 5082 | 9169 | 4937.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1990739381|tpg|BK011179.1| | Viruses | Viruses | Viruses | Viruses | 4937.0 | 1911.0 | 0.0 | 0.0 | ||
| 3268 | 3268 | PRJNA944406_CONTIG_69|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_69|Cyprivirus_A | PRJNA944406_CONTIG_69 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 69 | 3053 | 38.221812 | 1166.91192 | Cyprivirus A | 2304617 | Viruses | Viruses | 4909.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_69_length_3053_cov_38.221812_g7_i5 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | gi|1990739381|tpg|BK011179.1| | 2563826 | g7 | i5 | 95.681 | 3.00294792 | 3056 | 129 | 100.0 | 1 | 1 | 3053 | 5082 | 2027 | 9168 | 4909.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1990739381|tpg|BK011179.1| | Viruses | Viruses | Viruses | Viruses | 4909.0 | 1907.0 | 0.0 | 0.0 | ||
| 3293 | 3293 | PRJNA944406_CONTIG_141|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_141|Cyprivirus_A | PRJNA944406_CONTIG_141 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 141 | 2486 | 21.242851 | 528.0972759 | Cyprivirus A | 2304617 | Viruses | Viruses | 4082.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_141_length_2486_cov_21.242851_g7_i6 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g7 | i6 | 96.301 | 2.995172969 | 2487 | 90 | 100.0 | 2 | 1 | 2486 | 2553 | 68 | 7446 | 4082.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | Viruses | Viruses | 4082.0 | 1241.0 | 0.0 | 0.0 | ||
| 3294 | 3294 | PRJNA944406_CONTIG_142|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_142|Cyprivirus_A | PRJNA944406_CONTIG_142 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 142 | 2486 | 20.382511 | 506.7092235 | Cyprivirus A | 2304617 | Viruses | Viruses | 4181.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_142_length_2486_cov_20.382511_g7_i7 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g7 | i7 | 97.025 | 2.995172969 | 2487 | 72 | 100.0 | 2 | 1 | 2486 | 2553 | 68 | 7446 | 4181.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | Viruses | Viruses | 4181.0 | 1236.0 | 0.0 | 0.0 | ||
| 3295 | 3295 | PRJNA944406_CONTIG_143|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_143|Cyprivirus_A | PRJNA944406_CONTIG_143 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 143 | 2486 | 19.667634 | 488.9373812 | Cyprivirus A | 2304617 | Viruses | Viruses | 4120.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_143_length_2486_cov_19.667634_g7_i8 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g7 | i8 | 96.582 | 2.995172969 | 2487 | 83 | 100.0 | 2 | 1 | 2486 | 68 | 2553 | 7446 | 4120.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | Viruses | Viruses | 4120.0 | 1240.0 | 0.0 | 0.0 | ||
| 3967 | 3967 | PRJNA944406_CONTIG_10873|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA944406_CONTIG_10873|Cyprivirus_A | PRJNA944406_CONTIG_10873 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA944406 | 10873 | 378 | 2.688525 | 10.1626245 | Cyprivirus A | 2304617 | Viruses | Viruses | 566.0 | 1.0400000000000001e-156 | Cyprivirus A | Non-phage | NTclustered | PRJNA944406_P_NODE_10873_length_378_cov_2.688525_g9914_i0 | Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome | gi|1812398529|gb|MN524064.1| | 2563826 | g9914 | i0 | 93.651 | 3.002645503 | 378 | 24 | 100.0 | 0 | 1 | 378 | 2071 | 1694 | 1135 | 566.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1812398529|gb|MN524064.1| | Viruses | Viruses | Viruses | Viruses | 566.0 | 253.0 | 1.0400000000000001e-156 | 4.79e-75 | ||
| 9983 | 9983 | PRJNA944406_CONTIG_15085|Astyanax_tetra_cavefish_adintovirus|CLUSTER1_Adintovirus_anguilla1|13|12 | Adintovirus anguilla10665 | Endogenous or not fish-associated | PRJNA944406_CONTIG_15085|Astyanax_tetra_cavefish_adintovirus | PRJNA944406_CONTIG_15085 | Adintovirus anguilla1 | 34 | 19 | 10 | CLUSTER1_Adintovirus_anguilla1|13|12 | PRJNA1034995_S_NODE_18603_length_409_cov_23.456284_g18448_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.59e-05|NA | 13 | 12 | PRJNA944406 | 15085 | 331 | 0.751938 | 2.48891478 | Astyanax tetra cavefish adintovirus | 2609866 | Viruses | Viruses | 110.0 | 2.63e-28 | Astyanax tetra cavefish adintovirus | Non-phage | NR | PRJNA944406_P_NODE_15085_length_331_cov_0.751938_g14126_i0 | DAC81254.1 TPA_asm: cupiennin [Astyanax tetra cavefish adintovirus] | DAC81254.1 | 2609866 | g14126 | i0 | 60.7 | 1.432024169 | 84 | 33 | 76.1 | 0 | 252 | 1 | 6 | 89 | 474 | 110.0 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Astyanax tetra cavefish adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Adintovirus anguilla10665 | Astyanax tetra cavefish adintovirus | Viruses | Viruses | 110.0 | 2.63e-28 | ||||||||
| 10109 | 10109 | PRJNA944406_CONTIG_84573|Larimichthys_croaker_adintovirus|CLUSTER1_Larimichthys_croaker_adintovirus|8|6 | Larimichthys croaker adintovirus | Insufficient Evidence | PRJNA944406_CONTIG_84573|Larimichthys_croaker_adintovirus | PRJNA944406_CONTIG_84573 | Larimichthys croaker adintovirus | 19 | 14 | 10 | CLUSTER1_Larimichthys_croaker_adintovirus|8|6 | PRJNA1249042_S_NODE_6306_length_354_cov_2.350482_g6092_i0|Adintovirus_corythoichthys13919|NR|1.1e-28|NA | 7 | 6 | PRJNA944406 | 84573 | 246 | 1.768786 | 4.35121356 | Larimichthys croaker adintovirus | 2609857 | Viruses | Viruses | 94.7 | 6.910000000000001e-21 | Larimichthys croaker adintovirus | Non-phage | NR | PRJNA944406_P_NODE_84573_length_246_cov_1.768786_g83614_i0 | DAC81309.1 TPA_asm: integrase [Larimichthys croaker adintovirus] | DAC81309.1 | 2609857 | g83614 | i0 | 56.6 | 0.926829268 | 76 | 33 | 92.7 | 0 | 245 | 18 | 193 | 268 | 228 | 94.7 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Larimichthys croaker adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Larimichthys croaker adintovirus | Larimichthys croaker adintovirus | Viruses | Viruses | 94.7 | 6.910000000000001e-21 | ||||||||
| 10166 | 10166 | PRJNA944406_CONTIG_6007|Larimichthys_croaker_adintovirus|CLUSTER2_Larimichthys_croaker_adintovirus|5|5 | Larimichthys croaker adintovirus | Insufficient Evidence | PRJNA944406_CONTIG_6007|Larimichthys_croaker_adintovirus | PRJNA944406_CONTIG_6007 | Larimichthys croaker adintovirus | 19 | 14 | 10 | CLUSTER2_Larimichthys_croaker_adintovirus|5|5 | PRJNA944406_P_NODE_6007_length_524_cov_1.352550_g5055_i0|Larimichthys_croaker_adintovirus|NR|4.27e-20|NA | 4 | 4 | PRJNA944406 | 6007 | 524 | 1.35255 | 7.087362 | Larimichthys croaker adintovirus | 2609857 | Viruses | Viruses | 92.8 | 4.27e-20 | Larimichthys croaker adintovirus | Non-phage | NR | PRJNA944406_P_NODE_6007_length_524_cov_1.352550_g5055_i0 | DAC81313.1 TPA_asm: adenain [Larimichthys croaker adintovirus] | DAC81313.1 | 2609857 | g5055 | i0 | 57.4 | 2.25 | 68 | 26 | 38.9 | 1 | 320 | 523 | 37 | 101 | 1179 | 92.8 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Larimichthys croaker adintovirus | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Larimichthys croaker adintovirus | Larimichthys croaker adintovirus | Viruses | Viruses | 92.8 | 4.27e-20 |
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CREATE TABLE viruses_fish_associated_curated(contig_withLCA_withcluster VARCHAR, clusterLCA_curated VARCHAR, Category VARCHAR, contig_withLCA VARCHAR, shortcontigname VARCHAR, clusterLCA VARCHAR, clusterLCAcurated_contigcount BIGINT, clusterLCAcurated_bioprojectcount BIGINT, clusterLCAcurated_clustercount BIGINT, shortclustername VARCHAR, "cluster" VARCHAR, clustersize BIGINT, bioprojectsbycluster BIGINT, bioproject VARCHAR, node BIGINT, length BIGINT, coverage DOUBLE, rel_abundance DOUBLE, taxname_lca_NTorNR VARCHAR, taxid_lca_NTorNR BIGINT, taxoncategory_NTorNR VARCHAR, taxoncategorysimple_NTorNR VARCHAR, bits_NTorNR DOUBLE, evalue_NTorNR DOUBLE, viruscategory_NTorNR VARCHAR, viruscategorysimple_NTorNR VARCHAR, analysis_used VARCHAR, contig_name VARCHAR, lowcoverage_flag DOUBLE, target_title_NTorNR VARCHAR, target_NTorNR VARCHAR, taxid_NTorNR BIGINT, gene_NTorNR VARCHAR, allele_NTorNR VARCHAR, pident_NTorNR DOUBLE, sumperc_cov_NTorNR DOUBLE, alnlen_NTorNR BIGINT, mismatch_NTorNR BIGINT, qcov_NTorNR DOUBLE, gapopen_NTorNR BIGINT, qstart_NTorNR BIGINT, qend_NTorNR BIGINT, tstart_NTorNR BIGINT, tend_NTorNR BIGINT, sumalnlen_NTorNR BIGINT, maxbits_NTorNR DOUBLE, bits_percmax_NTorNR DOUBLE, tax_superkingdom_NTorNR VARCHAR, tax_clade_NTorNR VARCHAR, tax_kingdom_NTorNR VARCHAR, tax_phylum_NTorNR VARCHAR, tax_class_NTorNR VARCHAR, tax_order_NTorNR VARCHAR, tax_family_NTorNR VARCHAR, tax_genus_NTorNR VARCHAR, tax_species_NTorNR VARCHAR, classification VARCHAR, taxname_lca_NTclustered VARCHAR, taxname_lca_NR VARCHAR, target_NTclustered VARCHAR, taxoncategory_NTclustered VARCHAR, taxoncategory_NR VARCHAR, taxoncategorysimple_NTclustered VARCHAR, taxoncategorysimple_NR VARCHAR, bits_NTclustered DOUBLE, bits_NR DOUBLE, evalue_NTclustered DOUBLE, evalue_NR DOUBLE);; CREATE INDEX idx_vfac_bioproject ON viruses_fish_associated_curated(bioproject);; CREATE INDEX idx_vfac_category ON viruses_fish_associated_curated(Category);; CREATE INDEX idx_vfac_clusterLCA_curated ON viruses_fish_associated_curated(clusterLCA_curated);; CREATE INDEX idx_vfac_tax_family ON viruses_fish_associated_curated(tax_family_NTorNR);; CREATE INDEX idx_vfac_tax_genus ON viruses_fish_associated_curated(tax_genus_NTorNR);; CREATE INDEX idx_vfac_tax_species ON viruses_fish_associated_curated(tax_species_NTorNR);;