viruses_fish_associated_curated
12 rows where bioproject = "PRJNA897077" and clusterLCA_curated = "Zebrafish influenza B-like virus"
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| Link | rowid ▼ | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9857 | 9857 | PRJNA897077_CONTIG_183|Betainfluenzavirus|CLUSTER1_Betainfluenzavirus|18|9 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_183|Betainfluenzavirus | PRJNA897077_CONTIG_183 | Betainfluenzavirus | 80 | 13 | 8 | CLUSTER1_Betainfluenzavirus|18|9 | PRJEB2368_P_NODE_159_length_1879_cov_149.901737_g111_i0|Betainfluenzavirus_influenzae|NTclustered|0|NA | 18 | 9 | PRJNA897077 | 183 | 1803 | 25.034682 | 451.3753165 | Betainfluenzavirus | 197912 | Viruses | Viruses | 907.0 | 0.0 | Betainfluenzavirus | Non-phage | NTclustered | PRJNA897077_P_NODE_183_length_1803_cov_25.034682_g162_i0 | Influenza B virus B/Victoria/2/87 segment 5 nucleoprotein (NP) gene, complete cds | gi|4760940|gb|AF100359.1|AF100359 | 11520 | g162 | i0 | 77.77 | 82.45257903 | 1507 | 313 | 83.0 | 19 | 54 | 1550 | 1687 | 193 | 148662 | 907.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Betainfluenzavirus | Betainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus | Influenza B virus | gi|4760940|gb|AF100359.1|AF100359 | Viruses | Viruses | Viruses | Viruses | 907.0 | 844.0 | 0.0 | 1.8000000000000002e-303 | |
| 9858 | 9858 | PRJNA897077_CONTIG_185|Betainfluenzavirus|CLUSTER1_Betainfluenzavirus|18|9 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_185|Betainfluenzavirus | PRJNA897077_CONTIG_185 | Betainfluenzavirus | 80 | 13 | 8 | CLUSTER1_Betainfluenzavirus|18|9 | PRJEB2368_P_NODE_159_length_1879_cov_149.901737_g111_i0|Betainfluenzavirus_influenzae|NTclustered|0|NA | 18 | 9 | PRJNA897077 | 185 | 1800 | 64.767805 | 1165.82049 | Betainfluenzavirus | 197912 | Viruses | Viruses | 944.0 | 0.0 | Betainfluenzavirus | Non-phage | NTclustered | PRJNA897077_P_NODE_185_length_1800_cov_64.767805_g164_i0 | Influenza B virus (B/Sydney/31/2013) nucleoprotein (NP) gene, complete cds | gi|1000392034|gb|CY198788.1| | 1757646 | g164 | i0 | 77.857 | 85.81666667 | 1549 | 326 | 86.0 | 17 | 2 | 1543 | 1781 | 243 | 154470 | 944.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Betainfluenzavirus | Betainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus | Influenza B virus | gi|1000392034|gb|CY198788.1| | Viruses | Viruses | Viruses | Viruses | 944.0 | 865.0 | 0.0 | 5.0500000000004e-294 | |
| 9888 | 9888 | PRJNA897077_CONTIG_69|Betainfluenzavirus_influenzae|CLUSTER2_Betainfluenzavirus|15|6 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_69|Betainfluenzavirus_influenzae | PRJNA897077_CONTIG_69 | Betainfluenzavirus | 80 | 13 | 8 | CLUSTER2_Betainfluenzavirus|15|6 | PRJEB2368_P_NODE_81_length_2400_cov_12.127380_g53_i0|Betainfluenzavirus|NTclustered|0|NA | 15 | 6 | PRJNA897077 | 69 | 2357 | 9.592382 | 226.0924437 | Betainfluenzavirus influenzae | 2955465 | Viruses | Viruses | 1600.0 | 0.0 | Betainfluenzavirus influenzae | Non-phage | NTclustered | PRJNA897077_P_NODE_69_length_2357_cov_9.592382_g59_i0 | Influenza B virus (B/King County/WA-S27707/2019) segment 1 polymerase PB1 (PB1) gene, complete cds | gi|2915732589|gb|PV140086.1| | 11520 | g59 | i0 | 79.546 | 95.34408146 | 2249 | 454 | 95.0 | 6 | 3 | 2248 | 1 | 2246 | 224726 | 1600.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Betainfluenzavirus | Betainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus influenzae | Influenza B virus (B/Lee/194 | gi|2915732589|gb|PV140086.1| | Viruses | Viruses | Viruses | Viruses | 1600.0 | 1421.0 | 0.0 | 0.0 | |
| 9894 | 9894 | PRJNA897077_CONTIG_170|Wuhan_spiny_eel_influenza_virus|CLUSTER1_Wuhan_spiny_eel_influenza_virus|15|11 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_170|Wuhan_spiny_eel_influenza_virus | PRJNA897077_CONTIG_170 | Wuhan spiny eel influenza virus | 80 | 13 | 8 | CLUSTER1_Wuhan_spiny_eel_influenza_virus|15|11 | PRJNA345071_P_NODE_21_length_1869_cov_841.831292_g15_i0|Wuhan_spiny_eel_influenza_virus|NR|2.51e-251|NA | 15 | 11 | PRJNA897077 | 170 | 1847 | 118.968433 | 2197.346958 | Wuhan spiny eel influenza virus | 2116483 | Viruses | Viruses | 710.0 | 3.17e-250 | Wuhan spiny eel influenza virus | Non-phage | NR | PRJNA897077_P_NODE_170_length_1847_cov_118.968433_g149_i0 | AVM87624.1 hemagglutinin, partial [Wuhan spiny eel influenza virus] | AVM87624.1 | 2116483 | g149 | i0 | 62.2 | 0.924201408 | 569 | 211 | 92.3 | 3 | 1773 | 70 | 3 | 568 | 1707 | 710.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Wuhan spiny eel influenza virus | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Wuhan spiny eel influenza virus | Viruses | Viruses | 710.0 | 3.17e-250 | ||||||||
| 9897 | 9897 | PRJNA897077_CONTIG_539|Betainfluenzavirus|CLUSTER1_Betainfluenzavirus_influenzae|15|8 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_539|Betainfluenzavirus | PRJNA897077_CONTIG_539 | Betainfluenzavirus influenzae | 80 | 13 | 8 | CLUSTER1_Betainfluenzavirus_influenzae|15|8 | PRJNA897077_P_NODE_539_length_1214_cov_128.316389_g477_i0|Betainfluenzavirus|NTclustered|0|NA | 15 | 8 | PRJNA897077 | 539 | 1214 | 128.316389 | 1557.760962 | Betainfluenzavirus | 197912 | Viruses | Viruses | 686.0 | 0.0 | Betainfluenzavirus | Non-phage | NTclustered | PRJNA897077_P_NODE_539_length_1214_cov_128.316389_g477_i0 | Influenza B virus (B/Michigan/1/1971) segment 7 matrix protein 1 (M1) and BM2 protein (BM2) genes, complete cds | gi|2413738133|gb|OQ034387.1| | 11520 | g477 | i0 | 81.473 | 70.83443163 | 842 | 150 | 69.0 | 6 | 42 | 880 | 1 | 839 | 85993 | 686.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Betainfluenzavirus | Betainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus | Influenza B virus (B/Lee/194 | gi|2413738133|gb|OQ034387.1| | Viruses | Viruses | Viruses | Viruses | 686.0 | 439.0 | 0.0 | 5.25e-152 | |
| 9904 | 9904 | PRJNA897077_CONTIG_945|Betainfluenzavirus_influenzae|CLUSTER2_Betainfluenzavirus|15|6 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_945|Betainfluenzavirus_influenzae | PRJNA897077_CONTIG_945 | Betainfluenzavirus | 80 | 13 | 8 | CLUSTER2_Betainfluenzavirus|15|6 | PRJEB2368_P_NODE_81_length_2400_cov_12.127380_g53_i0|Betainfluenzavirus|NTclustered|0|NA | 15 | 6 | PRJNA897077 | 945 | 960 | 16.502818 | 158.4270528 | Betainfluenzavirus influenzae | 2955465 | Viruses | Viruses | 442.0 | 4.93e-119 | Betainfluenzavirus influenzae | Non-phage | NTclustered | PRJNA897077_P_NODE_945_length_960_cov_16.502818_g59_i1 | Influenza B virus (B/Guangzhou/01/2007) segment 1, complete sequence | gi|161377386|gb|EU305611.1| | 486176 | g59 | i1 | 83.23 | 49.96041667 | 483 | 79 | 50.0 | 2 | 477 | 958 | 482 | 1 | 47962 | 442.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Betainfluenzavirus | Betainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus influenzae | Betainfluenzavirus | gi|161377386|gb|EU305611.1| | Viruses | Viruses | Viruses | Viruses | 442.0 | 311.0 | 4.93e-119 | 1.6999999999999998e-96 | |
| 9948 | 9948 | PRJNA897077_CONTIG_291|Wuhan_spiny_eel_influenza_virus|CLUSTER2_Wuhan_spiny_eel_influenza_virus|14|10 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_291|Wuhan_spiny_eel_influenza_virus | PRJNA897077_CONTIG_291 | Wuhan spiny eel influenza virus | 80 | 13 | 8 | CLUSTER2_Wuhan_spiny_eel_influenza_virus|14|10 | PRJEB2368_P_NODE_284_length_1571_cov_81.546284_g203_i0|Wuhan_spiny_eel_influenza_virus|NR|1.26e-192|NA | 14 | 10 | PRJNA897077 | 291 | 1560 | 54.746469 | 854.0449164 | Wuhan spiny eel influenza virus | 2116483 | Viruses | Viruses | 575.0 | 4.05e-200 | Wuhan spiny eel influenza virus | Non-phage | NR | PRJNA897077_P_NODE_291_length_1560_cov_54.746469_g256_i0 | AVM87625.1 NA [Wuhan spiny eel influenza virus] | AVM87625.1 | 2116483 | g256 | i0 | 64.2 | 0.907692308 | 472 | 164 | 89.8 | 3 | 1494 | 94 | 1 | 472 | 1416 | 575.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Wuhan spiny eel influenza virus | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus | Wuhan spiny eel influenza virus | gi|549406152|gb|CY151371.1| | Viruses | Viruses | Viruses | Viruses | 71.3 | 575.0 | 4.43e-07 | 4.05e-200 | ||
| 9949 | 9949 | PRJNA897077_CONTIG_309|Wuhan_spiny_eel_influenza_virus|CLUSTER2_Wuhan_spiny_eel_influenza_virus|14|10 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_309|Wuhan_spiny_eel_influenza_virus | PRJNA897077_CONTIG_309 | Wuhan spiny eel influenza virus | 80 | 13 | 8 | CLUSTER2_Wuhan_spiny_eel_influenza_virus|14|10 | PRJEB2368_P_NODE_284_length_1571_cov_81.546284_g203_i0|Wuhan_spiny_eel_influenza_virus|NR|1.26e-192|NA | 14 | 10 | PRJNA897077 | 309 | 1519 | 17.403873 | 264.3648309 | Wuhan spiny eel influenza virus | 2116483 | Viruses | Viruses | 580.0 | 1.81e-202 | Wuhan spiny eel influenza virus | Non-phage | NR | PRJNA897077_P_NODE_309_length_1519_cov_17.403873_g273_i0 | AVM87625.1 NA [Wuhan spiny eel influenza virus] | AVM87625.1 | 2116483 | g273 | i0 | 64.4 | 0.932192232 | 472 | 163 | 92.2 | 3 | 61 | 1461 | 1 | 472 | 1416 | 580.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Wuhan spiny eel influenza virus | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Wuhan spiny eel influenza virus | Viruses | Viruses | 580.0 | 1.81e-202 | ||||||||
| 9999 | 9999 | PRJNA897077_CONTIG_65|Betainfluenzavirus|CLUSTER2_Betainfluenzavirus_influenzae|12|6 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_65|Betainfluenzavirus | PRJNA897077_CONTIG_65 | Betainfluenzavirus influenzae | 80 | 13 | 8 | CLUSTER2_Betainfluenzavirus_influenzae|12|6 | PRJEB2368_P_NODE_78_length_2413_cov_23.010943_g52_i0|Betainfluenzavirus_influenzae|NTclustered|0|NA | 12 | 6 | PRJNA897077 | 65 | 2373 | 11.017826 | 261.453011 | Betainfluenzavirus | 197912 | Viruses | Viruses | 1578.0 | 0.0 | Betainfluenzavirus | Non-phage | NTclustered | PRJNA897077_P_NODE_65_length_2373_cov_11.017826_g56_i0 | Influenza B virus (B/Delaware/30/2024) segment 2 polymerase PB2 (PB2) gene, complete cds | gi|2778032212|gb|PQ079036.1| | 11520 | g56 | i0 | 78.889 | 99.41761483 | 2359 | 474 | 99.0 | 24 | 16 | 2362 | 1 | 2347 | 235918 | 1578.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Betainfluenzavirus | Betainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus | gi|2778032212|gb|PQ079036.1| | Viruses | Viruses | Viruses | Viruses | 1578.0 | 1415.0 | 0.0 | 0.0 | ||
| 10001 | 10001 | PRJNA897077_CONTIG_79|Betainfluenzavirus|CLUSTER3_Betainfluenzavirus|12|7 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_79|Betainfluenzavirus | PRJNA897077_CONTIG_79 | Betainfluenzavirus | 80 | 13 | 8 | CLUSTER3_Betainfluenzavirus|12|7 | PRJEB2368_P_NODE_84_length_2374_cov_54.372700_g56_i0|Betainfluenzavirus|NTclustered|0|NA | 12 | 7 | PRJNA897077 | 79 | 2265 | 8.452099 | 191.4400424 | Betainfluenzavirus | 197912 | Viruses | Viruses | 1485.0 | 0.0 | Betainfluenzavirus | Non-phage | NTclustered | PRJNA897077_P_NODE_79_length_2265_cov_8.452099_g69_i0 | Influenza B virus (B/Johannesburg/06/1994) segment 3, complete sequence | gi|125663455|gb|CY019704.1| | 416693 | g69 | i0 | 78.974 | 97.15364238 | 2202 | 445 | 97.0 | 18 | 51 | 2243 | 2193 | 1 | 220053 | 1496.0 | 0.992647059 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Betainfluenzavirus | Betainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus | Betainfluenzavirus | gi|125663455|gb|CY019704.1| | Viruses | Viruses | Viruses | Viruses | 1485.0 | 1311.0 | 0.0 | 0.0 | |
| 10013 | 10013 | PRJNA897077_CONTIG_709|Betainfluenzavirus_influenzae|CLUSTER3_Betainfluenzavirus_influenzae|12|7 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_709|Betainfluenzavirus_influenzae | PRJNA897077_CONTIG_709 | Betainfluenzavirus influenzae | 80 | 13 | 8 | CLUSTER3_Betainfluenzavirus_influenzae|12|7 | PRJEB2368_P_NODE_544_length_1151_cov_155.050269_g412_i0|Betainfluenzavirus_influenzae|NTclustered|9.55e-147|NA | 12 | 7 | PRJNA897077 | 709 | 1078 | 59.726368 | 643.850247 | Betainfluenzavirus influenzae | 2955465 | Viruses | Viruses | 472.0 | 7.1e-128 | Betainfluenzavirus influenzae | Non-phage | NTclustered | PRJNA897077_P_NODE_709_length_1078_cov_59.726368_g626_i0 | Influenza B virus (B/Yamagata/16/1988) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds | gi|2413738274|gb|OQ034436.1| | 11520 | g626 | i0 | 75.069 | 88.41372913 | 1087 | 233 | 99.0 | 28 | 5 | 1076 | 1 | 1064 | 95310 | 472.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Betainfluenzavirus | Betainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus influenzae | Influenza B virus (B/Lee/194 | gi|2413738274|gb|OQ034436.1| | Viruses | Viruses | Viruses | Viruses | 472.0 | 387.0 | 7.1e-128 | 2.14e-131 | |
| 10025 | 10025 | PRJNA897077_CONTIG_3040|Betainfluenzavirus_influenzae|CLUSTER2_Betainfluenzavirus_influenzae|12|6 | Zebrafish influenza B-like virus | Novel | PRJNA897077_CONTIG_3040|Betainfluenzavirus_influenzae | PRJNA897077_CONTIG_3040 | Betainfluenzavirus influenzae | 80 | 13 | 8 | CLUSTER2_Betainfluenzavirus_influenzae|12|6 | PRJEB2368_P_NODE_78_length_2413_cov_23.010943_g52_i0|Betainfluenzavirus_influenzae|NTclustered|0|NA | 12 | 6 | PRJNA897077 | 3040 | 554 | 26.307692 | 145.7446137 | Betainfluenzavirus influenzae | 2955465 | Viruses | Viruses | 231.0 | 6.53e-56 | Betainfluenzavirus influenzae | Non-phage | NTclustered | PRJNA897077_P_NODE_3040_length_554_cov_26.307692_g2913_i0 | Influenza B virus (B/Washington/30/2023) segment 2 polymerase PB2 (PB2) gene, complete cds | gi|2716152687|gb|PP644821.1| | 11520 | g2913 | i0 | 81.818 | 13.69133574 | 275 | 50 | 50.0 | 0 | 12 | 286 | 2347 | 2073 | 7585 | 231.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Betainfluenzavirus | Betainfluenzavirus influenzae | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Insthoviricetes;Articulavirales;Orthomyxoviridae;Betainfluenzavirus;Zebrafish influenza B-like virus | Betainfluenzavirus influenzae | Betainfluenzavirus | gi|2716152687|gb|PP644821.1| | Viruses | Viruses | Viruses | Viruses | 231.0 | 160.0 | 6.53e-56 | 5.4699999999999994e-42 |
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CREATE TABLE viruses_fish_associated_curated(contig_withLCA_withcluster VARCHAR, clusterLCA_curated VARCHAR, Category VARCHAR, contig_withLCA VARCHAR, shortcontigname VARCHAR, clusterLCA VARCHAR, clusterLCAcurated_contigcount BIGINT, clusterLCAcurated_bioprojectcount BIGINT, clusterLCAcurated_clustercount BIGINT, shortclustername VARCHAR, "cluster" VARCHAR, clustersize BIGINT, bioprojectsbycluster BIGINT, bioproject VARCHAR, node BIGINT, length BIGINT, coverage DOUBLE, rel_abundance DOUBLE, taxname_lca_NTorNR VARCHAR, taxid_lca_NTorNR BIGINT, taxoncategory_NTorNR VARCHAR, taxoncategorysimple_NTorNR VARCHAR, bits_NTorNR DOUBLE, evalue_NTorNR DOUBLE, viruscategory_NTorNR VARCHAR, viruscategorysimple_NTorNR VARCHAR, analysis_used VARCHAR, contig_name VARCHAR, lowcoverage_flag DOUBLE, target_title_NTorNR VARCHAR, target_NTorNR VARCHAR, taxid_NTorNR BIGINT, gene_NTorNR VARCHAR, allele_NTorNR VARCHAR, pident_NTorNR DOUBLE, sumperc_cov_NTorNR DOUBLE, alnlen_NTorNR BIGINT, mismatch_NTorNR BIGINT, qcov_NTorNR DOUBLE, gapopen_NTorNR BIGINT, qstart_NTorNR BIGINT, qend_NTorNR BIGINT, tstart_NTorNR BIGINT, tend_NTorNR BIGINT, sumalnlen_NTorNR BIGINT, maxbits_NTorNR DOUBLE, bits_percmax_NTorNR DOUBLE, tax_superkingdom_NTorNR VARCHAR, tax_clade_NTorNR VARCHAR, tax_kingdom_NTorNR VARCHAR, tax_phylum_NTorNR VARCHAR, tax_class_NTorNR VARCHAR, tax_order_NTorNR VARCHAR, tax_family_NTorNR VARCHAR, tax_genus_NTorNR VARCHAR, tax_species_NTorNR VARCHAR, classification VARCHAR, taxname_lca_NTclustered VARCHAR, taxname_lca_NR VARCHAR, target_NTclustered VARCHAR, taxoncategory_NTclustered VARCHAR, taxoncategory_NR VARCHAR, taxoncategorysimple_NTclustered VARCHAR, taxoncategorysimple_NR VARCHAR, bits_NTclustered DOUBLE, bits_NR DOUBLE, evalue_NTclustered DOUBLE, evalue_NR DOUBLE);; CREATE INDEX idx_vfac_bioproject ON viruses_fish_associated_curated(bioproject);; CREATE INDEX idx_vfac_category ON viruses_fish_associated_curated(Category);; CREATE INDEX idx_vfac_clusterLCA_curated ON viruses_fish_associated_curated(clusterLCA_curated);; CREATE INDEX idx_vfac_tax_family ON viruses_fish_associated_curated(tax_family_NTorNR);; CREATE INDEX idx_vfac_tax_genus ON viruses_fish_associated_curated(tax_genus_NTorNR);; CREATE INDEX idx_vfac_tax_species ON viruses_fish_associated_curated(tax_species_NTorNR);;