viruses_fish_associated_curated
14 rows where bioproject = "PRJNA494251"
This data as json, CSV (advanced)
| Link | rowid ▼ | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3446 | 3446 | PRJNA494251_CONTIG_1085|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA494251_CONTIG_1085|Cyprivirus_A | PRJNA494251_CONTIG_1085 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA494251 | 1085 | 1102 | 3.168124 | 34.91272648 | Cyprivirus A | 2304617 | Viruses | Viruses | 1916.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA494251_P_NODE_1085_length_1102_cov_3.168124_g911_i0 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g911 | i0 | 98.091 | 2.999092559 | 1100 | 21 | 99.0 | 0 | 1 | 1100 | 6661 | 5562 | 3305 | 1916.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | Viruses | Viruses | 1916.0 | 722.0 | 0.0 | 1.03e-238 | ||
| 3736 | 3736 | PRJNA494251_CONTIG_4698|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA494251_CONTIG_4698|Cyprivirus_A | PRJNA494251_CONTIG_4698 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA494251 | 4698 | 586 | 1.54386 | 9.0470196 | Cyprivirus A | 2304617 | Viruses | Viruses | 1005.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA494251_P_NODE_4698_length_586_cov_1.543860_g4404_i0 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | gi|1990739381|tpg|BK011179.1| | 2563826 | g4404 | i0 | 97.611 | 3.0 | 586 | 14 | 100.0 | 0 | 1 | 586 | 4427 | 3842 | 1758 | 1005.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1990739381|tpg|BK011179.1| | Viruses | Viruses | Viruses | Viruses | 1005.0 | 392.0 | 0.0 | 2.33e-122 | ||
| 3745 | 3745 | PRJNA494251_CONTIG_4835|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA494251_CONTIG_4835|Cyprivirus_A | PRJNA494251_CONTIG_4835 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA494251 | 4835 | 578 | 1.241584 | 7.17635552 | Cyprivirus A | 2304617 | Viruses | Viruses | 937.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA494251_P_NODE_4835_length_578_cov_1.241584_g4541_i0 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | gi|1990739381|tpg|BK011179.1| | 2563826 | g4541 | i0 | 95.869 | 3.015570934 | 581 | 21 | 100.0 | 1 | 1 | 578 | 3451 | 2871 | 1743 | 937.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1990739381|tpg|BK011179.1| | Viruses | Viruses | Viruses | Viruses | 937.0 | 345.0 | 0.0 | 2.83e-106 | ||
| 3797 | 3797 | PRJNA494251_CONTIG_5779|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA494251_CONTIG_5779|Cyprivirus_A | PRJNA494251_CONTIG_5779 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA494251 | 5779 | 535 | 2.088745 | 11.17478575 | Cyprivirus A | 2304617 | Viruses | Viruses | 911.0 | 0.0 | Cyprivirus A | Non-phage | NTclustered | PRJNA494251_P_NODE_5779_length_535_cov_2.088745_g5481_i0 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | gi|1990739381|tpg|BK011179.1| | 2563826 | g5481 | i0 | 97.383 | 3.0 | 535 | 14 | 100.0 | 0 | 1 | 535 | 7944 | 7410 | 1605 | 911.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1990739381|tpg|BK011179.1| | Viruses | Viruses | Viruses | Viruses | 911.0 | 352.0 | 0.0 | 7.920000000000001e-109 | ||
| 4052 | 4052 | PRJNA494251_CONTIG_14439|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA494251_CONTIG_14439|Cyprivirus_A | PRJNA494251_CONTIG_14439 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA494251 | 14439 | 363 | 2.22069 | 8.0611047 | Cyprivirus A | 2304617 | Viruses | Viruses | 599.0 | 9.81e-167 | Cyprivirus A | Non-phage | NTclustered | PRJNA494251_P_NODE_14439_length_363_cov_2.220690_g14129_i0 | Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome | gi|1812398529|gb|MN524064.1| | 2563826 | g14129 | i0 | 96.419 | 3.0 | 363 | 13 | 100.0 | 0 | 1 | 363 | 1978 | 2340 | 1089 | 599.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1812398529|gb|MN524064.1| | Viruses | Viruses | Viruses | Viruses | 599.0 | 228.0 | 9.81e-167 | 1.18e-66 | ||
| 4125 | 4125 | PRJNA494251_CONTIG_19129|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA494251_CONTIG_19129|Cyprivirus_A | PRJNA494251_CONTIG_19129 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA494251 | 19129 | 323 | 1.804 | 5.82692 | Cyprivirus A | 2304617 | Viruses | Viruses | 558.0 | 1.47e-154 | Cyprivirus A | Non-phage | NTclustered | PRJNA494251_P_NODE_19129_length_323_cov_1.804000_g18815_i0 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g18815 | i0 | 97.833 | 3.0 | 323 | 7 | 100.0 | 0 | 1 | 323 | 6939 | 7261 | 969 | 558.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | Viruses | Viruses | 558.0 | 233.0 | 1.47e-154 | 2.2599999999999997e-68 | ||
| 4197 | 4197 | PRJNA494251_CONTIG_29178|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA494251_CONTIG_29178|Cyprivirus_A | PRJNA494251_CONTIG_29178 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA494251 | 29178 | 275 | 1.188119 | 3.26732725 | Cyprivirus A | 2304617 | Viruses | Viruses | 470.0 | 5.89e-128 | Cyprivirus A | Non-phage | NTclustered | PRJNA494251_P_NODE_29178_length_275_cov_1.188119_g28864_i0 | Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome | gi|1812398529|gb|MN524064.1| | 2563826 | g28864 | i0 | 97.455 | 3.0 | 275 | 7 | 100.0 | 0 | 1 | 275 | 4791 | 5065 | 825 | 470.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|1812398529|gb|MN524064.1| | Viruses | Viruses | Viruses | Viruses | 470.0 | 178.0 | 5.89e-128 | 1.14e-49 | ||
| 4255 | 4255 | PRJNA494251_CONTIG_44026|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA494251_CONTIG_44026|Cyprivirus_A | PRJNA494251_CONTIG_44026 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA494251 | 44026 | 245 | 1.209302 | 2.9627899 | Cyprivirus A | 2304617 | Viruses | Viruses | 392.0 | 1.15e-104 | Cyprivirus A | Non-phage | NTclustered | PRJNA494251_P_NODE_44026_length_245_cov_1.209302_g43712_i0 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g43712 | i0 | 95.51 | 3.0 | 245 | 11 | 100.0 | 0 | 1 | 245 | 1434 | 1678 | 735 | 392.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | Zebrafish picornavirus 1 | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | Viruses | Viruses | 392.0 | 166.0 | 1.15e-104 | 1.54e-45 | ||
| 4275 | 4275 | PRJNA494251_CONTIG_50766|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220 | Zebrafish picornavirus 1 | Known | PRJNA494251_CONTIG_50766|Cyprivirus_A | PRJNA494251_CONTIG_50766 | Cyprivirus A | 1161 | 220 | 1 | CLUSTER1_Cyprivirus_A|1164|220 | PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA | 1164 | 220 | PRJNA494251 | 50766 | 235 | 3.91358 | 9.196913 | Cyprivirus A | 2304617 | Viruses | Viruses | 418.0 | 1.8e-112 | Cyprivirus A | Non-phage | NTclustered | PRJNA494251_P_NODE_50766_length_235_cov_3.913580_g50452_i0 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | gi|2500378199|ref|NC_076245.1| | 2563826 | g50452 | i0 | 98.723 | 4.09787234 | 235 | 3 | 100.0 | 0 | 1 | 235 | 8135 | 7901 | 963 | 418.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Cyprivirus A | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1 | Cyprivirus A | gi|2500378199|ref|NC_076245.1| | Viruses | Viruses | 418.0 | 1.8e-112 | |||||||
| 6608 | 6608 | PRJNA494251_CONTIG_3124|Carp_edema_virus|CLUSTER6_Carp_edema_virus|274|111 | Zebrafish jaw poxvirus | Novel | PRJNA494251_CONTIG_3124|Carp_edema_virus | PRJNA494251_CONTIG_3124 | Carp edema virus | 4680 | 143 | 36 | CLUSTER6_Carp_edema_virus|274|111 | PRJNA1075480_S_NODE_10_length_11763_cov_107.476048_g4_i0|Carp_edema_virus|NR|0|NA | 264 | 107 | PRJNA494251 | 3124 | 697 | 2.334936 | 16.27450392 | Carp edema virus | 1653087 | Viruses | Viruses | 125.0 | 2.29e-30 | Carp edema virus | Non-phage | NR | PRJNA494251_P_NODE_3124_length_697_cov_2.334936_g2852_i0 | BCT22626.1 putative DNA-binding virion core protein [Carp edema virus] | BCT22626.1 | 1653087 | g2852 | i0 | 37.2 | 0.959827834 | 223 | 133 | 94.3 | 5 | 657 | 1 | 3 | 222 | 669 | 125.0 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Nucleocytoviricota | Pokkesviricetes | Chitovirales | Poxviridae | Carp edema virus | Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus | Carp edema virus | Viruses | Viruses | 125.0 | 2.29e-30 | ||||||||
| 7624 | 7624 | PRJNA494251_CONTIG_45608|Carp_edema_virus|CLUSTER10_Carp_edema_virus|185|56 | Zebrafish jaw poxvirus | Novel | PRJNA494251_CONTIG_45608|Carp_edema_virus | PRJNA494251_CONTIG_45608 | Carp edema virus | 4680 | 143 | 36 | CLUSTER10_Carp_edema_virus|185|56 | PRJNA318414_P_NODE_23_length_7708_cov_280.993359_g18_i0|Carp_edema_virus|NR|5.21e-142|NA | 183 | 56 | PRJNA494251 | 45608 | 244 | 0.900585 | 2.1974274 | Carp edema virus | 1653087 | Viruses | Viruses | 99.4 | 1.62e-22 | Carp edema virus | Non-phage | NR | PRJNA494251_P_NODE_45608_length_244_cov_0.900585_g45294_i0 | BCT22662.1 soluble myristylprotein [Carp edema virus] | BCT22662.1 | 1653087 | g45294 | i0 | 56.3 | 0.983606557 | 80 | 35 | 98.4 | 0 | 242 | 3 | 80 | 159 | 240 | 99.4 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Nucleocytoviricota | Pokkesviricetes | Chitovirales | Poxviridae | Carp edema virus | Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus | Carp edema virus | Viruses | Viruses | 99.4 | 1.62e-22 | ||||||||
| 8341 | 8341 | PRJNA494251_CONTIG_6|Coleura_bat_picornavirus|CLUSTER1_Coleura_bat_picornavirus|100|37 | Zebrafish jaw picornavirus | Novel | PRJNA494251_CONTIG_6|Coleura_bat_picornavirus | PRJNA494251_CONTIG_6 | Coleura bat picornavirus | 89 | 37 | 1 | CLUSTER1_Coleura_bat_picornavirus|100|37 | PRJNA670521_P_NODE_5_length_8668_cov_14.621640_g3_i0|Kobuvirus|NR|2.54e-153|NA | 93 | 37 | PRJNA494251 | 6 | 5682 | 7.299519 | 414.7586696 | Coleura bat picornavirus | 3141868 | Viruses | Viruses | 516.0 | 1.59e-146 | Coleura bat picornavirus | Non-phage | NR | PRJNA494251_P_NODE_6_length_5682_cov_7.299519_g4_i0 | XBH24011.1 MAG: polyprotein [Coleura bat picornavirus] | XBH24011.1 | 3141868 | g4 | i0 | 32.8 | 0.67001056 | 1269 | 680 | 65.2 | 36 | 3983 | 282 | 1256 | 2385 | 3807 | 516.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Coleura bat picornavirus | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Kobuvirus;Zebrafish jaw picornavirus | Coleura bat picornavirus | Viruses | Viruses | 516.0 | 1.59e-146 | |||||||||
| 8344 | 8344 | PRJNA494251_CONTIG_44|Mink_kobuvirus|CLUSTER1_Coleura_bat_picornavirus|100|37 | Zebrafish jaw picornavirus | Novel | PRJNA494251_CONTIG_44|Mink_kobuvirus | PRJNA494251_CONTIG_44 | Coleura bat picornavirus | 89 | 37 | 1 | CLUSTER1_Coleura_bat_picornavirus|100|37 | PRJNA670521_P_NODE_5_length_8668_cov_14.621640_g3_i0|Kobuvirus|NR|2.54e-153|NA | 93 | 37 | PRJNA494251 | 44 | 2834 | 4.365085 | 123.7065089 | Mink kobuvirus | 3242813 | Viruses | Viruses | 89.4 | 8.05e-14 | Mink kobuvirus | Non-phage | NR | PRJNA494251_P_NODE_44_length_2834_cov_4.365085_g37_i0 | XEQ84337.1 polyprotein, partial [Mink kobuvirus] | XEQ84337.1 | 3242813 | g37 | i0 | 25.4 | 0.374735356 | 354 | 222 | 34.1 | 9 | 1618 | 2583 | 112 | 455 | 1062 | 89.4 | 1.0 | Viruses | Riboviria | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Kobuvirus | Mink kobuvirus | Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Kobuvirus;Zebrafish jaw picornavirus | Mink kobuvirus | Viruses | Viruses | 89.4 | 8.05e-14 | |||||||
| 9678 | 9678 | PRJNA494251_CONTIG_24053|Chuvivirus|CLUSTER2_Chuvivirus|39|39 | Chuvivirus | Endogenous or not fish-associated | PRJNA494251_CONTIG_24053|Chuvivirus | PRJNA494251_CONTIG_24053 | Chuvivirus | 116 | 110 | 4 | CLUSTER2_Chuvivirus|39|39 | PRJNA896643_S_NODE_1019_length_399_cov_2.776243_g949_i0|Chuvivirus|NR|3.94e-45|NA | 39 | 39 | PRJNA494251 | 24053 | 295 | 1.963964 | 5.7936938 | Chuvivirus | 2842604 | Viruses | Viruses | 135.0 | 3.08e-35 | Chuvivirus | Non-phage | NR | PRJNA494251_P_NODE_24053_length_295_cov_1.963964_g23739_i0 | WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] | WET19887.1 | 3032433 | g23739 | i0 | 63.3 | 1.993220339 | 98 | 36 | 99.7 | 0 | 2 | 295 | 298 | 395 | 588 | 135.0 | 1.0 | Viruses | Riboviria | Orthornavirae | Negarnaviricota | Monjiviricetes | Jingchuvirales | Chuviridae | Chuvivirus | Freshwater turtle neural virus 1 | Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Jingchuvirales;Chuviridae;Chuvivirus | Chuvivirus | Viruses | Viruses | 135.0 | 3.08e-35 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE viruses_fish_associated_curated(contig_withLCA_withcluster VARCHAR, clusterLCA_curated VARCHAR, Category VARCHAR, contig_withLCA VARCHAR, shortcontigname VARCHAR, clusterLCA VARCHAR, clusterLCAcurated_contigcount BIGINT, clusterLCAcurated_bioprojectcount BIGINT, clusterLCAcurated_clustercount BIGINT, shortclustername VARCHAR, "cluster" VARCHAR, clustersize BIGINT, bioprojectsbycluster BIGINT, bioproject VARCHAR, node BIGINT, length BIGINT, coverage DOUBLE, rel_abundance DOUBLE, taxname_lca_NTorNR VARCHAR, taxid_lca_NTorNR BIGINT, taxoncategory_NTorNR VARCHAR, taxoncategorysimple_NTorNR VARCHAR, bits_NTorNR DOUBLE, evalue_NTorNR DOUBLE, viruscategory_NTorNR VARCHAR, viruscategorysimple_NTorNR VARCHAR, analysis_used VARCHAR, contig_name VARCHAR, lowcoverage_flag DOUBLE, target_title_NTorNR VARCHAR, target_NTorNR VARCHAR, taxid_NTorNR BIGINT, gene_NTorNR VARCHAR, allele_NTorNR VARCHAR, pident_NTorNR DOUBLE, sumperc_cov_NTorNR DOUBLE, alnlen_NTorNR BIGINT, mismatch_NTorNR BIGINT, qcov_NTorNR DOUBLE, gapopen_NTorNR BIGINT, qstart_NTorNR BIGINT, qend_NTorNR BIGINT, tstart_NTorNR BIGINT, tend_NTorNR BIGINT, sumalnlen_NTorNR BIGINT, maxbits_NTorNR DOUBLE, bits_percmax_NTorNR DOUBLE, tax_superkingdom_NTorNR VARCHAR, tax_clade_NTorNR VARCHAR, tax_kingdom_NTorNR VARCHAR, tax_phylum_NTorNR VARCHAR, tax_class_NTorNR VARCHAR, tax_order_NTorNR VARCHAR, tax_family_NTorNR VARCHAR, tax_genus_NTorNR VARCHAR, tax_species_NTorNR VARCHAR, classification VARCHAR, taxname_lca_NTclustered VARCHAR, taxname_lca_NR VARCHAR, target_NTclustered VARCHAR, taxoncategory_NTclustered VARCHAR, taxoncategory_NR VARCHAR, taxoncategorysimple_NTclustered VARCHAR, taxoncategorysimple_NR VARCHAR, bits_NTclustered DOUBLE, bits_NR DOUBLE, evalue_NTclustered DOUBLE, evalue_NR DOUBLE);; CREATE INDEX idx_vfac_bioproject ON viruses_fish_associated_curated(bioproject);; CREATE INDEX idx_vfac_category ON viruses_fish_associated_curated(Category);; CREATE INDEX idx_vfac_clusterLCA_curated ON viruses_fish_associated_curated(clusterLCA_curated);; CREATE INDEX idx_vfac_tax_family ON viruses_fish_associated_curated(tax_family_NTorNR);; CREATE INDEX idx_vfac_tax_genus ON viruses_fish_associated_curated(tax_genus_NTorNR);; CREATE INDEX idx_vfac_tax_species ON viruses_fish_associated_curated(tax_species_NTorNR);;