metadata: viruses_fish_associated_curated: 2 rows where bioproject = "PRJNA1175381", clusterLCA_curated = "Zebrafish jaw poxvirus" and tax_family

2 rows where bioproject = "PRJNA1175381", clusterLCA_curated = "Zebrafish jaw poxvirus" and tax_family_NTorNR = "Poxviridae"

descending

Link	rowid ▼	contig_withLCA_withcluster	clusterLCA_curated	Category	contig_withLCA	shortcontigname	clusterLCA	clusterLCAcurated_contigcount	clusterLCAcurated_bioprojectcount	clusterLCAcurated_clustercount	shortclustername	cluster	clustersize	bioprojectsbycluster	bioproject	node	length	coverage	rel_abundance	taxname_lca_NTorNR	taxid_lca_NTorNR	taxoncategory_NTorNR	taxoncategorysimple_NTorNR	bits_NTorNR	evalue_NTorNR	viruscategory_NTorNR	viruscategorysimple_NTorNR	analysis_used	contig_name	lowcoverage_flag	target_title_NTorNR	target_NTorNR	taxid_NTorNR	gene_NTorNR	allele_NTorNR	pident_NTorNR	sumperc_cov_NTorNR	alnlen_NTorNR	mismatch_NTorNR	qcov_NTorNR	gapopen_NTorNR	qstart_NTorNR	qend_NTorNR	tstart_NTorNR	tend_NTorNR	sumalnlen_NTorNR	maxbits_NTorNR	bits_percmax_NTorNR	tax_superkingdom_NTorNR	tax_clade_NTorNR	tax_kingdom_NTorNR	tax_phylum_NTorNR	tax_class_NTorNR	tax_order_NTorNR	tax_family_NTorNR	tax_genus_NTorNR	tax_species_NTorNR	classification	taxname_lca_NTclustered	taxname_lca_NR	target_NTclustered	taxoncategory_NTclustered	taxoncategory_NR	taxoncategorysimple_NTclustered	taxoncategorysimple_NR	bits_NTclustered	bits_NR	evalue_NTclustered	evalue_NR
4729	4729	PRJNA1175381_CONTIG_7813\|Carp_edema_virus\|CLUSTER1_Carp_edema_virus\|632\|87	Zebrafish jaw poxvirus	Novel	PRJNA1175381_CONTIG_7813\|Carp_edema_virus	PRJNA1175381_CONTIG_7813	Carp edema virus	4680	143	36	CLUSTER1_Carp_edema_virus\|632\|87	PRJNA1075480_S_NODE_3_length_24555_cov_43.250551_g1_i0\|Carp_edema_virus\|NR\|0\|NA	629	87	PRJNA1175381	7813	282	5.263158	14.84210556	Carp edema virus	1653087	Viruses	Viruses	92.4	2.02e-19	Carp edema virus	Non-phage	NR	PRJNA1175381_P_NODE_7813_length_282_cov_5.263158_g7680_i0		BCT22646.1 virion core protein P4b [Carp edema virus]	BCT22646.1	1653087	g7680	i0	47.4	1.031914894	97	47	98.9	1	281	3	133	229	291	92.4	1.0	Viruses	Varidnaviria	Bamfordvirae	Nucleocytoviricota	Pokkesviricetes	Chitovirales	Poxviridae		Carp edema virus	Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus		Carp edema virus			Viruses		Viruses		92.4		2.02e-19
7136	7136	PRJNA1175381_CONTIG_10059\|Carp_edema_virus\|CLUSTER8_Carp_edema_virus\|189\|52	Zebrafish jaw poxvirus	Novel	PRJNA1175381_CONTIG_10059\|Carp_edema_virus	PRJNA1175381_CONTIG_10059	Carp edema virus	4680	143	36	CLUSTER8_Carp_edema_virus\|189\|52	PRJEB2894_P_NODE_1_length_11775_cov_16.335690_g0_i0\|Carp_edema_virus\|NR\|0\|NA	189	52	PRJNA1175381	10059	246	4.387283	10.79271618	Carp edema virus	1653087	Viruses	Viruses	54.7	4.46e-07	Carp edema virus	Non-phage	NR	PRJNA1175381_P_NODE_10059_length_246_cov_4.387283_g9926_i0		BCT22679.1 putative virion surface protein [Carp edema virus]	BCT22679.1	1653087	g9926	i0	44.9	0.597560976	49	27	59.8	0	246	100	82	130	147	54.7	1.0	Viruses	Varidnaviria	Bamfordvirae	Nucleocytoviricota	Pokkesviricetes	Chitovirales	Poxviridae		Carp edema virus	Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus		Carp edema virus			Viruses		Viruses		54.7		4.46e-07

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CREATE TABLE viruses_fish_associated_curated(contig_withLCA_withcluster VARCHAR, clusterLCA_curated VARCHAR, Category VARCHAR, contig_withLCA VARCHAR, shortcontigname VARCHAR, clusterLCA VARCHAR, clusterLCAcurated_contigcount BIGINT, clusterLCAcurated_bioprojectcount BIGINT, clusterLCAcurated_clustercount BIGINT, shortclustername VARCHAR, "cluster" VARCHAR, clustersize BIGINT, bioprojectsbycluster BIGINT, bioproject VARCHAR, node BIGINT, length BIGINT, coverage DOUBLE, rel_abundance DOUBLE, taxname_lca_NTorNR VARCHAR, taxid_lca_NTorNR BIGINT, taxoncategory_NTorNR VARCHAR, taxoncategorysimple_NTorNR VARCHAR, bits_NTorNR DOUBLE, evalue_NTorNR DOUBLE, viruscategory_NTorNR VARCHAR, viruscategorysimple_NTorNR VARCHAR, analysis_used VARCHAR, contig_name VARCHAR, lowcoverage_flag DOUBLE, target_title_NTorNR VARCHAR, target_NTorNR VARCHAR, taxid_NTorNR BIGINT, gene_NTorNR VARCHAR, allele_NTorNR VARCHAR, pident_NTorNR DOUBLE, sumperc_cov_NTorNR DOUBLE, alnlen_NTorNR BIGINT, mismatch_NTorNR BIGINT, qcov_NTorNR DOUBLE, gapopen_NTorNR BIGINT, qstart_NTorNR BIGINT, qend_NTorNR BIGINT, tstart_NTorNR BIGINT, tend_NTorNR BIGINT, sumalnlen_NTorNR BIGINT, maxbits_NTorNR DOUBLE, bits_percmax_NTorNR DOUBLE, tax_superkingdom_NTorNR VARCHAR, tax_clade_NTorNR VARCHAR, tax_kingdom_NTorNR VARCHAR, tax_phylum_NTorNR VARCHAR, tax_class_NTorNR VARCHAR, tax_order_NTorNR VARCHAR, tax_family_NTorNR VARCHAR, tax_genus_NTorNR VARCHAR, tax_species_NTorNR VARCHAR, classification VARCHAR, taxname_lca_NTclustered VARCHAR, taxname_lca_NR VARCHAR, target_NTclustered VARCHAR, taxoncategory_NTclustered VARCHAR, taxoncategory_NR VARCHAR, taxoncategorysimple_NTclustered VARCHAR, taxoncategorysimple_NR VARCHAR, bits_NTclustered DOUBLE, bits_NR DOUBLE, evalue_NTclustered DOUBLE, evalue_NR DOUBLE);;
CREATE INDEX idx_vfac_bioproject ON viruses_fish_associated_curated(bioproject);;
CREATE INDEX idx_vfac_category ON viruses_fish_associated_curated(Category);;
CREATE INDEX idx_vfac_clusterLCA_curated ON viruses_fish_associated_curated(clusterLCA_curated);;
CREATE INDEX idx_vfac_tax_family ON viruses_fish_associated_curated(tax_family_NTorNR);;
CREATE INDEX idx_vfac_tax_genus ON viruses_fish_associated_curated(tax_genus_NTorNR);;
CREATE INDEX idx_vfac_tax_species ON viruses_fish_associated_curated(tax_species_NTorNR);;