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viruses_fish_associated_curated

9 rows where Category = "Novel", bioproject = "PRJNA533623" and clusterLCA_curated = "Zebrafish jaw poxvirus"

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tax_species_NTorNR 1

tax_family_NTorNR 1

clusterLCA_curated 1

  • Zebrafish jaw poxvirus · 9 ✖

bioproject 1

  • PRJNA533623 · 9 ✖

Category 1

  • Novel · 9 ✖

tax_genus_NTorNR 0

Link rowid ▼ contig_withLCA_withcluster clusterLCA_curated Category contig_withLCA shortcontigname clusterLCA clusterLCAcurated_contigcount clusterLCAcurated_bioprojectcount clusterLCAcurated_clustercount shortclustername cluster clustersize bioprojectsbycluster bioproject node length coverage rel_abundance taxname_lca_NTorNR taxid_lca_NTorNR taxoncategory_NTorNR taxoncategorysimple_NTorNR bits_NTorNR evalue_NTorNR viruscategory_NTorNR viruscategorysimple_NTorNR analysis_used contig_name lowcoverage_flag target_title_NTorNR target_NTorNR taxid_NTorNR gene_NTorNR allele_NTorNR pident_NTorNR sumperc_cov_NTorNR alnlen_NTorNR mismatch_NTorNR qcov_NTorNR gapopen_NTorNR qstart_NTorNR qend_NTorNR tstart_NTorNR tend_NTorNR sumalnlen_NTorNR maxbits_NTorNR bits_percmax_NTorNR tax_superkingdom_NTorNR tax_clade_NTorNR tax_kingdom_NTorNR tax_phylum_NTorNR tax_class_NTorNR tax_order_NTorNR tax_family_NTorNR tax_genus_NTorNR tax_species_NTorNR classification taxname_lca_NTclustered taxname_lca_NR target_NTclustered taxoncategory_NTclustered taxoncategory_NR taxoncategorysimple_NTclustered taxoncategorysimple_NR bits_NTclustered bits_NR evalue_NTclustered evalue_NR
5872 5872 PRJNA533623_CONTIG_47289|Carp_edema_virus|CLUSTER3_Carp_edema_virus|359|69 Zebrafish jaw poxvirus Novel PRJNA533623_CONTIG_47289|Carp_edema_virus PRJNA533623_CONTIG_47289 Carp edema virus 4680 143 36 CLUSTER3_Carp_edema_virus|359|69 PRJNA318414_P_NODE_2_length_28050_cov_65.213304_g1_i0|Carp_edema_virus|NR|0|NA 358 69 PRJNA533623 47289 307 1.52439 4.6798773 Carp edema virus 1653087 Viruses Viruses 83.2 5.18e-16 Carp edema virus Non-phage NR PRJNA533623_P_NODE_47289_length_307_cov_1.524390_g45510_i0   BCT22717.1 B22R family protein [Carp edema virus] BCT22717.1 1653087 g45510 i0 39.8 1.006514658 103 58 96.7 2 297 1 1022 1124 309 83.2 1.0 Viruses Varidnaviria Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Carp edema virus Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus   Carp edema virus     Viruses   Viruses   83.2   5.18e-16
5875 5875 PRJNA533623_CONTIG_53391|Carp_edema_virus|CLUSTER3_Carp_edema_virus|359|69 Zebrafish jaw poxvirus Novel PRJNA533623_CONTIG_53391|Carp_edema_virus PRJNA533623_CONTIG_53391 Carp edema virus 4680 143 36 CLUSTER3_Carp_edema_virus|359|69 PRJNA318414_P_NODE_2_length_28050_cov_65.213304_g1_i0|Carp_edema_virus|NR|0|NA 358 69 PRJNA533623 53391 280 0.853881 2.3908668 Carp edema virus 1653087 Viruses Viruses 73.6 8.77e-13 Carp edema virus Non-phage NR PRJNA533623_P_NODE_53391_length_280_cov_0.853881_g51612_i0   BCT22717.1 B22R family protein [Carp edema virus] BCT22717.1 1653087 g51612 i0 45.2 0.996428571 93 43 96.4 2 5 274 344 431 279 73.6 1.0 Viruses Varidnaviria Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Carp edema virus Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus   Carp edema virus     Viruses   Viruses   73.6   8.77e-13
6206 6206 PRJNA533623_CONTIG_70408|Carp_edema_virus|CLUSTER4_Carp_edema_virus|348|78 Zebrafish jaw poxvirus Novel PRJNA533623_CONTIG_70408|Carp_edema_virus PRJNA533623_CONTIG_70408 Carp edema virus 4680 143 36 CLUSTER4_Carp_edema_virus|348|78 PRJNA1075480_S_NODE_1_length_24682_cov_102.472876_g0_i0|Carp_edema_virus|NR|2.31e-98|NA 331 77 PRJNA533623 70408 219 1.082278 2.37018882 Carp edema virus 1653087 Viruses Viruses 88.2 2.52e-18 Carp edema virus Non-phage NR PRJNA533623_P_NODE_70408_length_219_cov_1.082278_g68627_i0   BCT22498.1 alpha-L-fucosidase [Carp edema virus] BCT22498.1 1653087 g68627 i0 53.4 1.0 73 34 100.0 0 219 1 284 356 219 88.2 1.0 Viruses Varidnaviria Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Carp edema virus Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus   Carp edema virus     Viruses   Viruses   88.2   2.52e-18
6207 6207 PRJNA533623_CONTIG_72686|Carp_edema_virus|CLUSTER4_Carp_edema_virus|348|78 Zebrafish jaw poxvirus Novel PRJNA533623_CONTIG_72686|Carp_edema_virus PRJNA533623_CONTIG_72686 Carp edema virus 4680 143 36 CLUSTER4_Carp_edema_virus|348|78 PRJNA1075480_S_NODE_1_length_24682_cov_102.472876_g0_i0|Carp_edema_virus|NR|2.31e-98|NA 331 77 PRJNA533623 72686 212 1.066225 2.260397 Carp edema virus 1653087 Viruses Viruses 70.5 4.06e-12 Carp edema virus Non-phage NR PRJNA533623_P_NODE_72686_length_212_cov_1.066225_g70905_i0   BCT22498.1 alpha-L-fucosidase [Carp edema virus] BCT22498.1 1653087 g70905 i0 50.0 0.79245283 56 28 79.2 0 168 1 221 276 168 70.5 1.0 Viruses Varidnaviria Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Carp edema virus Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus   Carp edema virus     Viruses   Viruses   70.5   4.06e-12
6658 6658 PRJNA533623_CONTIG_9479|Carp_edema_virus|CLUSTER6_Carp_edema_virus|274|111 Zebrafish jaw poxvirus Novel PRJNA533623_CONTIG_9479|Carp_edema_virus PRJNA533623_CONTIG_9479 Carp edema virus 4680 143 36 CLUSTER6_Carp_edema_virus|274|111 PRJNA1075480_S_NODE_10_length_11763_cov_107.476048_g4_i0|Carp_edema_virus|NR|0|NA 264 107 PRJNA533623 9479 761 4.608571 35.07122531 Carp edema virus 1653087 Viruses Viruses 125.0 3.01e-30 Carp edema virus Non-phage NR PRJNA533623_P_NODE_9479_length_761_cov_4.608571_g7947_i0   BCT22626.1 putative DNA-binding virion core protein [Carp edema virus] BCT22626.1 1653087 g7947 i0 36.7 0.890932983 226 136 87.5 5 671 6 3 225 678 125.0 1.0 Viruses Varidnaviria Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Carp edema virus Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus   Carp edema virus     Viruses   Viruses   125.0   3.01e-30
6711 6711 PRJNA533623_CONTIG_46866|Carp_edema_virus|CLUSTER6_Carp_edema_virus|274|111 Zebrafish jaw poxvirus Novel PRJNA533623_CONTIG_46866|Carp_edema_virus PRJNA533623_CONTIG_46866 Carp edema virus 4680 143 36 CLUSTER6_Carp_edema_virus|274|111 PRJNA1075480_S_NODE_10_length_11763_cov_107.476048_g4_i0|Carp_edema_virus|NR|0|NA 264 107 PRJNA533623 46866 309 1.165323 3.60084807 Carp edema virus 1653087 Viruses Viruses 47.0 0.00237 Carp edema virus Non-phage NR PRJNA533623_P_NODE_46866_length_309_cov_1.165323_g45088_i0   BCT22626.1 putative DNA-binding virion core protein [Carp edema virus] BCT22626.1 1653087 g45088 i0 33.8 0.660194175 68 35 56.3 1 308 135 245 312 204 47.0 1.0 Viruses Varidnaviria Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Carp edema virus Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus   Carp edema virus     Viruses   Viruses   47.0   0.00237
7642 7642 PRJNA533623_CONTIG_71717|Carp_edema_virus|CLUSTER10_Carp_edema_virus|185|56 Zebrafish jaw poxvirus Novel PRJNA533623_CONTIG_71717|Carp_edema_virus PRJNA533623_CONTIG_71717 Carp edema virus 4680 143 36 CLUSTER10_Carp_edema_virus|185|56 PRJNA318414_P_NODE_23_length_7708_cov_280.993359_g18_i0|Carp_edema_virus|NR|5.21e-142|NA 183 56 PRJNA533623 71717 215 1.233766 2.6525969 Carp edema virus 1653087 Viruses Viruses 52.8 7.25e-06 Carp edema virus Non-phage NR PRJNA533623_P_NODE_71717_length_215_cov_1.233766_g69936_i0   BCT22663.1 hypothetical protein [Carp edema virus] BCT22663.1 1653087 g69936 i0 46.7 0.627906977 45 24 62.8 0 81 215 138 182 135 52.8 1.0 Viruses Varidnaviria Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Carp edema virus Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus   Carp edema virus     Viruses   Viruses   52.8   7.25e-06
7941 7941 PRJNA533623_CONTIG_8645|Carp_edema_virus|CLUSTER13_Carp_edema_virus|165|64 Zebrafish jaw poxvirus Novel PRJNA533623_CONTIG_8645|Carp_edema_virus PRJNA533623_CONTIG_8645 Carp edema virus 4680 143 36 CLUSTER13_Carp_edema_virus|165|64 PRJNA1075480_S_NODE_19_length_10478_cov_35.577415_g8_i0|Carp_edema_virus|NR|1.04e-246|NA 165 64 PRJNA533623 8645 795 1.941417 15.43426515 Carp edema virus 1653087 Viruses Viruses 81.6 6.51e-15 Carp edema virus Non-phage NR PRJNA533623_P_NODE_8645_length_795_cov_1.941417_g7168_i0   BCT22600.1 hypothetical protein [Carp edema virus] BCT22600.1 1653087 g7168 i0 34.6 0.611320755 162 94 59.2 5 775 305 23 177 486 81.6 1.0 Viruses Varidnaviria Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Carp edema virus Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus root Carp edema virus gi|1885270526|emb|LR862145.1| Root_unresolved Viruses Root_unresolved Viruses 54.7 81.6 0.022 6.51e-15
8844 8844 PRJNA533623_CONTIG_54136|Carp_edema_virus|CLUSTER18_Carp_edema_virus|87|53 Zebrafish jaw poxvirus Novel PRJNA533623_CONTIG_54136|Carp_edema_virus PRJNA533623_CONTIG_54136 Carp edema virus 4680 143 36 CLUSTER18_Carp_edema_virus|87|53 PRJNA854078_P_NODE_15_length_5165_cov_11.858209_g9_i0|Carp_edema_virus|NR|2.41e-94|NA 86 52 PRJNA533623 54136 277 0.893519 2.47504763 Carp edema virus 1653087 Viruses Viruses 61.6 2.84e-09 Carp edema virus Non-phage NR PRJNA533623_P_NODE_54136_length_277_cov_0.893519_g52357_i0   UZH43387.1 DNA-binding virion core protein, partial [Carp edema virus] UZH43387.1 1653087 g52357 i0 38.2 1.927797834 89 54 96.4 1 2 268 67 154 534 61.6 1.0 Viruses Varidnaviria Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Carp edema virus Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus   Carp edema virus     Viruses   Viruses   61.6   2.84e-09

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CREATE TABLE viruses_fish_associated_curated(contig_withLCA_withcluster VARCHAR, clusterLCA_curated VARCHAR, Category VARCHAR, contig_withLCA VARCHAR, shortcontigname VARCHAR, clusterLCA VARCHAR, clusterLCAcurated_contigcount BIGINT, clusterLCAcurated_bioprojectcount BIGINT, clusterLCAcurated_clustercount BIGINT, shortclustername VARCHAR, "cluster" VARCHAR, clustersize BIGINT, bioprojectsbycluster BIGINT, bioproject VARCHAR, node BIGINT, length BIGINT, coverage DOUBLE, rel_abundance DOUBLE, taxname_lca_NTorNR VARCHAR, taxid_lca_NTorNR BIGINT, taxoncategory_NTorNR VARCHAR, taxoncategorysimple_NTorNR VARCHAR, bits_NTorNR DOUBLE, evalue_NTorNR DOUBLE, viruscategory_NTorNR VARCHAR, viruscategorysimple_NTorNR VARCHAR, analysis_used VARCHAR, contig_name VARCHAR, lowcoverage_flag DOUBLE, target_title_NTorNR VARCHAR, target_NTorNR VARCHAR, taxid_NTorNR BIGINT, gene_NTorNR VARCHAR, allele_NTorNR VARCHAR, pident_NTorNR DOUBLE, sumperc_cov_NTorNR DOUBLE, alnlen_NTorNR BIGINT, mismatch_NTorNR BIGINT, qcov_NTorNR DOUBLE, gapopen_NTorNR BIGINT, qstart_NTorNR BIGINT, qend_NTorNR BIGINT, tstart_NTorNR BIGINT, tend_NTorNR BIGINT, sumalnlen_NTorNR BIGINT, maxbits_NTorNR DOUBLE, bits_percmax_NTorNR DOUBLE, tax_superkingdom_NTorNR VARCHAR, tax_clade_NTorNR VARCHAR, tax_kingdom_NTorNR VARCHAR, tax_phylum_NTorNR VARCHAR, tax_class_NTorNR VARCHAR, tax_order_NTorNR VARCHAR, tax_family_NTorNR VARCHAR, tax_genus_NTorNR VARCHAR, tax_species_NTorNR VARCHAR, classification VARCHAR, taxname_lca_NTclustered VARCHAR, taxname_lca_NR VARCHAR, target_NTclustered VARCHAR, taxoncategory_NTclustered VARCHAR, taxoncategory_NR VARCHAR, taxoncategorysimple_NTclustered VARCHAR, taxoncategorysimple_NR VARCHAR, bits_NTclustered DOUBLE, bits_NR DOUBLE, evalue_NTclustered DOUBLE, evalue_NR DOUBLE);;
CREATE INDEX idx_vfac_bioproject ON viruses_fish_associated_curated(bioproject);;
CREATE INDEX idx_vfac_category ON viruses_fish_associated_curated(Category);;
CREATE INDEX idx_vfac_clusterLCA_curated ON viruses_fish_associated_curated(clusterLCA_curated);;
CREATE INDEX idx_vfac_tax_family ON viruses_fish_associated_curated(tax_family_NTorNR);;
CREATE INDEX idx_vfac_tax_genus ON viruses_fish_associated_curated(tax_genus_NTorNR);;
CREATE INDEX idx_vfac_tax_species ON viruses_fish_associated_curated(tax_species_NTorNR);;