viruses_fish_associated_curated
2 rows where Category = "Insufficient Evidence" and tax_species_NTorNR = "Adintovirus anguilla10665"
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| Link | rowid ▼ | contig_withLCA_withcluster | clusterLCA_curated | Category | contig_withLCA | shortcontigname | clusterLCA | clusterLCAcurated_contigcount | clusterLCAcurated_bioprojectcount | clusterLCAcurated_clustercount | shortclustername | cluster | clustersize | bioprojectsbycluster | bioproject | node | length | coverage | rel_abundance | taxname_lca_NTorNR | taxid_lca_NTorNR | taxoncategory_NTorNR | taxoncategorysimple_NTorNR | bits_NTorNR | evalue_NTorNR | viruscategory_NTorNR | viruscategorysimple_NTorNR | analysis_used | contig_name | lowcoverage_flag | target_title_NTorNR | target_NTorNR | taxid_NTorNR | gene_NTorNR | allele_NTorNR | pident_NTorNR | sumperc_cov_NTorNR | alnlen_NTorNR | mismatch_NTorNR | qcov_NTorNR | gapopen_NTorNR | qstart_NTorNR | qend_NTorNR | tstart_NTorNR | tend_NTorNR | sumalnlen_NTorNR | maxbits_NTorNR | bits_percmax_NTorNR | tax_superkingdom_NTorNR | tax_clade_NTorNR | tax_kingdom_NTorNR | tax_phylum_NTorNR | tax_class_NTorNR | tax_order_NTorNR | tax_family_NTorNR | tax_genus_NTorNR | tax_species_NTorNR | classification | taxname_lca_NTclustered | taxname_lca_NR | target_NTclustered | taxoncategory_NTclustered | taxoncategory_NR | taxoncategorysimple_NTclustered | taxoncategorysimple_NR | bits_NTclustered | bits_NR | evalue_NTclustered | evalue_NR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10142 | 10142 | PRJNA668529_CONTIG_25569|Adintovirus_anguilla1|CLUSTER1_Astyanax_tetra_cavefish_adintovirus|7|6 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA668529_CONTIG_25569|Adintovirus_anguilla1 | PRJNA668529_CONTIG_25569 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER1_Astyanax_tetra_cavefish_adintovirus|7|6 | PRJNA1150539_S_NODE_13470_length_412_cov_4.790560_g12875_i0|Polintoviricetes|NR|4.65e-24|NA | 7 | 6 | PRJNA668529 | 25569 | 239 | 3.246988 | 7.76030132 | Adintovirus anguilla1 | 3115889 | Viruses | Viruses | 74.7 | 7.94e-14 | Adintovirus anguilla1 | Non-phage | NR | PRJNA668529_S_NODE_25569_length_239_cov_3.246988_g25364_i0 | DBA49786.1 MAG TPA_asm: PacK [Adintovirus anguilla10665] | DBA49786.1 | 3115889 | g25364 | i0 | 66.0 | 0.589958159 | 47 | 16 | 59.0 | 0 | 1 | 141 | 234 | 280 | 141 | 74.7 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Adintovirus anguilla10665 | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Adintovirus anguilla1 | Viruses | Viruses | 74.7 | 7.94e-14 | ||||||||
| 10226 | 10226 | PRJNA896554_CONTIG_152891|Adintovirus_anguilla1|CLUSTER4_Astyanax_tetra_cavefish_adintovirus|3|3 | Astyanax tetra cavefish adintovirus | Insufficient Evidence | PRJNA896554_CONTIG_152891|Adintovirus_anguilla1 | PRJNA896554_CONTIG_152891 | Astyanax tetra cavefish adintovirus | 22 | 15 | 8 | CLUSTER4_Astyanax_tetra_cavefish_adintovirus|3|3 | PRJNA1233465e_S_NODE_32714_length_308_cov_4.830116_g31404_i0|Astyanax_tetra_cavefish_adintovirus|NR|3.71e-07|NA | 3 | 3 | PRJNA896554 | 152891 | 250 | 0.870056 | 2.17514 | Adintovirus anguilla1 | 3115889 | Viruses | Viruses | 122.0 | 3.7400000000000005e-32 | Adintovirus anguilla1 | Non-phage | NR | PRJNA896554_P_NODE_152891_length_250_cov_0.870056_g145351_i0 | DBA49780.1 MAG TPA_asm: Penton [Adintovirus anguilla10665] | DBA49780.1 | 3115889 | g145351 | i0 | 61.7 | 0.972 | 81 | 31 | 97.2 | 0 | 250 | 8 | 157 | 237 | 243 | 122.0 | 1.0 | Viruses | Varidnaviria | Bamfordvirae | Preplasmiviricota | Polintoviricetes | Orthopolintovirales | Adintoviridae | Adintovirus anguilla10665 | Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Astyanax tetra cavefish adintovirus | Adintovirus anguilla1 | Viruses | Viruses | 122.0 | 3.7400000000000005e-32 |
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CREATE TABLE viruses_fish_associated_curated(contig_withLCA_withcluster VARCHAR, clusterLCA_curated VARCHAR, Category VARCHAR, contig_withLCA VARCHAR, shortcontigname VARCHAR, clusterLCA VARCHAR, clusterLCAcurated_contigcount BIGINT, clusterLCAcurated_bioprojectcount BIGINT, clusterLCAcurated_clustercount BIGINT, shortclustername VARCHAR, "cluster" VARCHAR, clustersize BIGINT, bioprojectsbycluster BIGINT, bioproject VARCHAR, node BIGINT, length BIGINT, coverage DOUBLE, rel_abundance DOUBLE, taxname_lca_NTorNR VARCHAR, taxid_lca_NTorNR BIGINT, taxoncategory_NTorNR VARCHAR, taxoncategorysimple_NTorNR VARCHAR, bits_NTorNR DOUBLE, evalue_NTorNR DOUBLE, viruscategory_NTorNR VARCHAR, viruscategorysimple_NTorNR VARCHAR, analysis_used VARCHAR, contig_name VARCHAR, lowcoverage_flag DOUBLE, target_title_NTorNR VARCHAR, target_NTorNR VARCHAR, taxid_NTorNR BIGINT, gene_NTorNR VARCHAR, allele_NTorNR VARCHAR, pident_NTorNR DOUBLE, sumperc_cov_NTorNR DOUBLE, alnlen_NTorNR BIGINT, mismatch_NTorNR BIGINT, qcov_NTorNR DOUBLE, gapopen_NTorNR BIGINT, qstart_NTorNR BIGINT, qend_NTorNR BIGINT, tstart_NTorNR BIGINT, tend_NTorNR BIGINT, sumalnlen_NTorNR BIGINT, maxbits_NTorNR DOUBLE, bits_percmax_NTorNR DOUBLE, tax_superkingdom_NTorNR VARCHAR, tax_clade_NTorNR VARCHAR, tax_kingdom_NTorNR VARCHAR, tax_phylum_NTorNR VARCHAR, tax_class_NTorNR VARCHAR, tax_order_NTorNR VARCHAR, tax_family_NTorNR VARCHAR, tax_genus_NTorNR VARCHAR, tax_species_NTorNR VARCHAR, classification VARCHAR, taxname_lca_NTclustered VARCHAR, taxname_lca_NR VARCHAR, target_NTclustered VARCHAR, taxoncategory_NTclustered VARCHAR, taxoncategory_NR VARCHAR, taxoncategorysimple_NTclustered VARCHAR, taxoncategorysimple_NR VARCHAR, bits_NTclustered DOUBLE, bits_NR DOUBLE, evalue_NTclustered DOUBLE, evalue_NR DOUBLE);; CREATE INDEX idx_vfac_bioproject ON viruses_fish_associated_curated(bioproject);; CREATE INDEX idx_vfac_category ON viruses_fish_associated_curated(Category);; CREATE INDEX idx_vfac_clusterLCA_curated ON viruses_fish_associated_curated(clusterLCA_curated);; CREATE INDEX idx_vfac_tax_family ON viruses_fish_associated_curated(tax_family_NTorNR);; CREATE INDEX idx_vfac_tax_genus ON viruses_fish_associated_curated(tax_genus_NTorNR);; CREATE INDEX idx_vfac_tax_species ON viruses_fish_associated_curated(tax_species_NTorNR);;