{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where bioproject = \"PRJNA599026\" and clusterLCA_curated = \"Zebrafish gut calicivirus\"", "rows": [[9498, "PRJNA599026_CONTIG_15311|Fujian_spotted_paddle-tail_newt_calicivirus|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish gut calicivirus", "Novel", "PRJNA599026_CONTIG_15311|Fujian_spotted_paddle-tail_newt_calicivirus", "PRJNA599026_CONTIG_15311", "Barramundi calicivirus 1", 48, 14, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA599026", 15311, 258, 1.301435, 3.3577023, "Fujian spotted paddle-tail newt calicivirus", 2116168, "Viruses", "Viruses", 53.5, 7.22e-06, "Fujian spotted paddle-tail newt calicivirus", "Non-phage", "NR", "PRJNA599026_S_NODE_15311_length_258_cov_1.301435_g14855_i0", null, "AVM87224.1 polyprotein [Fujian spotted paddle-tail newt calicivirus]", "AVM87224.1", 2116168, "g14855", "i0", 35.5, 1.790697674, 76, 48, 87.2, 1, 11, 235, 342, 417, 462, 53.5, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Fujian spotted paddle-tail newt calicivirus", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish gut calicivirus", null, "Fujian spotted paddle-tail newt calicivirus", null, null, "Viruses", null, "Viruses", null, 53.5, null, 7.22e-06], [9513, "PRJNA599026_CONTIG_26953|Newt_calicivirus|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish gut calicivirus", "Novel", "PRJNA599026_CONTIG_26953|Newt_calicivirus", "PRJNA599026_CONTIG_26953", "Barramundi calicivirus 1", 48, 14, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA599026", 26953, 209, 2.11875, 4.4281875, "Newt calicivirus", 2961777, "Viruses", "Viruses", 101.0, 5.969999999999999e-23, "Newt calicivirus", "Non-phage", "NR", "PRJNA599026_S_NODE_26953_length_209_cov_2.118750_g26497_i0", null, "DAZ91097.1 TPA_asm: nonstructural protein, partial [Newt calicivirus]", "DAZ91097.1", 2961777, "g26497", "i0", 59.4, 0.990430622, 69, 28, 99.0, 0, 1, 207, 1796, 1864, 207, 101.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Newt calicivirus", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish gut calicivirus", null, "Newt calicivirus", null, null, "Viruses", null, "Viruses", null, 101.0, null, 5.969999999999999e-23], [9520, "PRJNA599026_CONTIG_37307|Beihai_conger_calicivirus|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish gut calicivirus", "Novel", "PRJNA599026_CONTIG_37307|Beihai_conger_calicivirus", "PRJNA599026_CONTIG_37307", "Barramundi calicivirus 1", 48, 14, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA599026", 37307, 186, 2.007299, 3.73357614, "Beihai conger calicivirus", 2116161, "Viruses", "Viruses", 92.8, 3.99e-20, "Beihai conger calicivirus", "Non-phage", "NR", "PRJNA599026_S_NODE_37307_length_186_cov_2.007299_g36851_i0", null, "AVM87195.1 polyprotein [Beihai conger calicivirus]", "AVM87195.1", 2116161, "g36851", "i0", 70.7, 4.758064516, 58, 17, 93.5, 0, 184, 11, 1713, 1770, 885, 92.8, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Beihai conger calicivirus", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish gut calicivirus", null, "Beihai conger calicivirus", null, null, "Viruses", null, "Viruses", null, 92.8, null, 3.99e-20], [9524, "PRJNA599026_CONTIG_67814|Zhejiang_gunthers_frog_calicivirus_1|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish gut calicivirus", "Novel", "PRJNA599026_CONTIG_67814|Zhejiang_gunthers_frog_calicivirus_1", "PRJNA599026_CONTIG_67814", "Barramundi calicivirus 1", 48, 14, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA599026", 67814, 162, 0.902655, 1.4623011, "Zhejiang gunthers frog calicivirus 1", 2116158, "Viruses", "Viruses", 56.6, 1.55e-07, "Zhejiang gunthers frog calicivirus 1", "Non-phage", "NR", "PRJNA599026_S_NODE_67814_length_162_cov_0.902655_g67358_i0", null, "AVM87226.1 polyprotein [Zhejiang gunthers frog calicivirus 1]", "AVM87226.1", 2116158, "g67358", "i0", 55.1, 0.907407407, 49, 21, 90.7, 1, 152, 6, 267, 314, 147, 56.6, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Zhejiang gunthers frog calicivirus 1", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish gut calicivirus", null, "Zhejiang gunthers frog calicivirus 1", null, null, "Viruses", null, "Viruses", null, 56.6, null, 1.55e-07]], "truncated": false, "filtered_table_rows_count": 4, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"bioproject\" = :p0 and \"clusterLCA_curated\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA599026", "p1": "Zebrafish gut calicivirus"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "Novel", "label": "Novel", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus&Category=Novel", "selected": false}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "Zebrafish gut calicivirus", "label": "Zebrafish gut calicivirus", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026", "selected": true}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "Caliciviridae", "label": "Caliciviridae", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus&tax_family_NTorNR=Caliciviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "Beihai conger calicivirus", "label": "Beihai conger calicivirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus&tax_species_NTorNR=Beihai+conger+calicivirus", "selected": false}, {"value": "Fujian spotted paddle-tail newt calicivirus", "label": "Fujian spotted paddle-tail newt calicivirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus&tax_species_NTorNR=Fujian+spotted+paddle-tail+newt+calicivirus", "selected": false}, {"value": "Newt calicivirus", "label": "Newt calicivirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus&tax_species_NTorNR=Newt+calicivirus", "selected": false}, {"value": "Zhejiang gunthers frog calicivirus 1", "label": "Zhejiang gunthers frog calicivirus 1", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus&tax_species_NTorNR=Zhejiang+gunthers+frog+calicivirus+1", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA599026&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "PRJNA599026", "label": "PRJNA599026", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?clusterLCA_curated=Zebrafish+gut+calicivirus", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 41.79774999647634}