{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where bioproject = \"PRJNA543225\"", "rows": [[1895, "PRJNA543225_CONTIG_3|Zebrafish_picornavirus_2|CLUSTER1_Zebrafish_picornavirus_2|1382|320", "Danio blood picornavirus/Zebrafish picornavirus 2", "Novel", "PRJNA543225_CONTIG_3|Zebrafish_picornavirus_2", "PRJNA543225_CONTIG_3", "Zebrafish picornavirus 2", 1369, 320, 1, "CLUSTER1_Zebrafish_picornavirus_2|1382|320", "PRJNA924006_P_NODE_1_length_7278_cov_16.682998_g0_i0|Zebrafish_picornavirus_2|NR|0|NA", 1370, 320, "PRJNA543225", 3, 7220, 749.993306, 54149.51669, "Zebrafish picornavirus 2", 3063761, "Viruses", "Viruses", 2484.0, 0.0, "Zebrafish picornavirus 2", "Non-phage", "NTclustered", "PRJNA543225_P_NODE_3_length_7220_cov_749.993306_g2_i0", null, "Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds", "gi|2551699335|gb|OK619588.1|", 3063761, "g2", "i0", 91.816, 0.665373961, 1784, 140, 66.0, 6, 7, 1787, 7109, 5329, 4804, 2484.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Zebrafish picornavirus 2", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Danio blood picornavirus/Zebrafish picornavirus 2", "Zebrafish picornavirus 2", "Zebrafish picornavirus 2", "gi|2551699335|gb|OK619588.1|", "Viruses", "Viruses", "Viruses", "Viruses", 2484.0, 2476.0, 0.0, 0.0], [4073, "PRJNA543225_CONTIG_15478|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA543225_CONTIG_15478|Cyprivirus_A", "PRJNA543225_CONTIG_15478", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA543225", 15478, 162, 0.920354, 1.49097348, "Cyprivirus A", 2304617, "Viruses", "Viruses", 283.0, 4.3900000000000003e-72, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA543225_P_NODE_15478_length_162_cov_0.920354_g15258_i0", null, "Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome", "gi|2500378199|ref|NC_076245.1|", 2563826, "g15258", "i0", 98.148, 3.0, 162, 3, 100.0, 0, 1, 162, 6430, 6591, 486, 283.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|2500378199|ref|NC_076245.1|", "Viruses", "Viruses", "Viruses", "Viruses", 283.0, 106.0, 4.3900000000000003e-72, 5.42e-25], [9154, "PRJNA543225_CONTIG_5589|Hardyhead_chuvirus|CLUSTER1_Salarius_guttatus_piscichuvirus|63|56", "Salarius guttatus piscichuvirus", "Endogenous or not fish-associated", "PRJNA543225_CONTIG_5589|Hardyhead_chuvirus", "PRJNA543225_CONTIG_5589", "Salarius guttatus piscichuvirus", 67, 58, 5, "CLUSTER1_Salarius_guttatus_piscichuvirus|63|56", "PRJNA649806_P_NODE_3355_length_644_cov_1.443082_g3086_i0|Salarius_guttatus_piscichuvirus|NR|7.17e-28|NA", 63, 56, "PRJNA543225", 5589, 274, 1.355556, 3.71422344, "Hardyhead chuvirus", 2830721, "Viruses", "Viruses", 60.1, 4.49e-08, "Hardyhead chuvirus", "Non-phage", "NR", "PRJNA543225_P_NODE_5589_length_274_cov_1.355556_g5369_i0", null, "YP_010840939.1 L protein [Hardyhead chuvirus]", "YP_010840939.1", 2830721, "g5369", "i0", 42.2, 0.98540146, 90, 48, 94.2, 2, 5, 262, 24, 113, 270, 60.1, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Jingchuvirales", "Chuviridae", "Piscichuvirus", "Piscichuvirus craterocephali", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Jingchuvirales;Chuviridae;Piscichuvirus;Salarius guttatus piscichuvirus", null, "Hardyhead chuvirus", null, null, "Viruses", null, "Viruses", null, 60.1, null, 4.49e-08], [9481, "PRJNA543225_CONTIG_4|Barramundi_calicivirus_1|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish neurinoma calicivirus", "Novel", "PRJNA543225_CONTIG_4|Barramundi_calicivirus_1", "PRJNA543225_CONTIG_4", "Barramundi calicivirus 1", 1, 1, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA543225", 4, 7161, 13.650169, 977.4886021, "Barramundi calicivirus 1", 3162777, "Viruses", "Viruses", 1501.0, 0.0, "Barramundi calicivirus 1", "Non-phage", "NR", "PRJNA543225_P_NODE_4_length_7161_cov_13.650169_g3_i0", null, "XBS25272.1 MAG: ORF1 protein [Barramundi calicivirus 1]", "XBS25272.1", 3162777, "g3", "i0", 38.9, 0.949308756, 2266, 1199, 90.9, 44, 7077, 568, 10, 2186, 6798, 1501.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Barramundi calicivirus 1", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish neurinoma calicivirus", null, "Barramundi calicivirus 1", null, null, "Viruses", null, "Viruses", null, 1501.0, null, 0.0]], "truncated": false, "filtered_table_rows_count": 4, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"bioproject\" = :p0 order by rowid limit 101", "params": {"p0": "PRJNA543225"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225", "results": [{"value": "Novel", "label": "Novel", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&Category=Novel", "selected": false}, {"value": "Endogenous or not fish-associated", "label": "Endogenous or not fish-associated", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&Category=Endogenous+or+not+fish-associated", "selected": false}, {"value": "Known", "label": "Known", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&Category=Known", "selected": false}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225", "results": [{"value": "Danio blood picornavirus/Zebrafish picornavirus 2", "label": "Danio blood picornavirus/Zebrafish picornavirus 2", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&clusterLCA_curated=Danio+blood+picornavirus%2FZebrafish+picornavirus+2", "selected": false}, {"value": "Salarius guttatus piscichuvirus", "label": "Salarius guttatus piscichuvirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&clusterLCA_curated=Salarius+guttatus+piscichuvirus", "selected": false}, {"value": "Zebrafish neurinoma calicivirus", "label": "Zebrafish neurinoma calicivirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&clusterLCA_curated=Zebrafish+neurinoma+calicivirus", "selected": false}, {"value": "Zebrafish picornavirus 1", "label": "Zebrafish picornavirus 1", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&clusterLCA_curated=Zebrafish+picornavirus+1", "selected": false}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225", "results": [{"value": "Picornaviridae", "label": "Picornaviridae", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&tax_family_NTorNR=Picornaviridae", "selected": false}, {"value": "Caliciviridae", "label": "Caliciviridae", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&tax_family_NTorNR=Caliciviridae", "selected": false}, {"value": "Chuviridae", "label": "Chuviridae", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&tax_family_NTorNR=Chuviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225", "results": [{"value": "Piscichuvirus", "label": "Piscichuvirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&tax_genus_NTorNR=Piscichuvirus", "selected": false}], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225", "results": [{"value": "Barramundi calicivirus 1", "label": "Barramundi calicivirus 1", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&tax_species_NTorNR=Barramundi+calicivirus+1", "selected": false}, {"value": "Cyprivirus A", "label": "Cyprivirus A", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&tax_species_NTorNR=Cyprivirus+A", "selected": false}, {"value": "Piscichuvirus craterocephali", "label": "Piscichuvirus craterocephali", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&tax_species_NTorNR=Piscichuvirus+craterocephali", "selected": false}, {"value": "Zebrafish picornavirus 2", "label": "Zebrafish picornavirus 2", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225&tax_species_NTorNR=Zebrafish+picornavirus+2", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA543225", "results": [{"value": "PRJNA543225", "label": "PRJNA543225", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 61.65042001521215}