{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where bioproject = \"PRJNA484127\" and clusterLCA_curated = \"Zebrafish gut calicivirus\"", "rows": [[9482, "PRJNA484127_CONTIG_7|Barramundi_calicivirus_1|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish gut calicivirus", "Novel", "PRJNA484127_CONTIG_7|Barramundi_calicivirus_1", "PRJNA484127_CONTIG_7", "Barramundi calicivirus 1", 48, 14, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA484127", 7, 5013, 9.52996, 477.7368948, "Barramundi calicivirus 1", 3162777, "Viruses", "Viruses", 1168.0, 0.0, "Barramundi calicivirus 1", "Non-phage", "NR", "PRJNA484127_P_NODE_7_length_5013_cov_9.529960_g6_i0", null, "XBS25272.1 MAG: ORF1 protein [Barramundi calicivirus 1]", "XBS25272.1", 3162777, "g6", "i0", 41.6, 0.935368043, 1563, 830, 89.9, 27, 5004, 496, 664, 2203, 4689, 1168.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Barramundi calicivirus 1", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish gut calicivirus", null, "Barramundi calicivirus 1", null, null, "Viruses", null, "Viruses", null, 1168.0, null, 0.0], [9486, "PRJNA484127_CONTIG_412|Barramundi_calicivirus_1|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish gut calicivirus", "Novel", "PRJNA484127_CONTIG_412|Barramundi_calicivirus_1", "PRJNA484127_CONTIG_412", "Barramundi calicivirus 1", 48, 14, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA484127", 412, 1418, 5.441636, 77.16239848, "Barramundi calicivirus 1", 3162777, "Viruses", "Viruses", 340.0, 6.36e-100, "Barramundi calicivirus 1", "Non-phage", "NR", "PRJNA484127_P_NODE_412_length_1418_cov_5.441636_g357_i0", null, "XBS25272.1 MAG: ORF1 protein [Barramundi calicivirus 1]", "XBS25272.1", 3162777, "g357", "i0", 43.3, 0.985895628, 466, 245, 96.9, 11, 1376, 3, 199, 653, 1398, 340.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Barramundi calicivirus 1", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish gut calicivirus", null, "Barramundi calicivirus 1", null, null, "Viruses", null, "Viruses", null, 340.0, null, 6.36e-100], [9508, "PRJNA484127_CONTIG_21642|Barramundi_calicivirus_1|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish gut calicivirus", "Novel", "PRJNA484127_CONTIG_21642|Barramundi_calicivirus_1", "PRJNA484127_CONTIG_21642", "Barramundi calicivirus 1", 48, 14, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA484127", 21642, 286, 1.403756, 4.01474216, "Barramundi calicivirus 1", 3162777, "Viruses", "Viruses", 84.0, 2.14e-16, "Barramundi calicivirus 1", "Non-phage", "NR", "PRJNA484127_P_NODE_21642_length_286_cov_1.403756_g21493_i0", null, "XBS25272.1 MAG: ORF1 protein [Barramundi calicivirus 1]", "XBS25272.1", 3162777, "g21493", "i0", 46.3, 0.996503497, 95, 50, 99.7, 1, 286, 2, 1827, 1920, 285, 84.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Barramundi calicivirus 1", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish gut calicivirus", null, "Barramundi calicivirus 1", null, null, "Viruses", null, "Viruses", null, 84.0, null, 2.14e-16], [9511, "PRJNA484127_CONTIG_24235|Dongbei_arctic_lamprey_calicivirus_2|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish gut calicivirus", "Novel", "PRJNA484127_CONTIG_24235|Dongbei_arctic_lamprey_calicivirus_2", "PRJNA484127_CONTIG_24235", "Barramundi calicivirus 1", 48, 14, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA484127", 24235, 274, 1.164179, 3.18985046, "Dongbei arctic lamprey calicivirus 2", 2116167, "Viruses", "Viruses", 82.8, 4.64e-16, "Dongbei arctic lamprey calicivirus 2", "Non-phage", "NR", "PRJNA484127_P_NODE_24235_length_274_cov_1.164179_g24086_i0", null, "AVM87212.1 polyprotein [Dongbei arctic lamprey calicivirus 2]", "AVM87212.1", 2116167, "g24086", "i0", 52.3, 0.941605839, 86, 39, 94.2, 2, 261, 4, 688, 771, 258, 82.8, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Dongbei arctic lamprey calicivirus 2", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish gut calicivirus", null, "Dongbei arctic lamprey calicivirus 2", null, null, "Viruses", null, "Viruses", null, 82.8, null, 4.64e-16], [9522, "PRJNA484127_CONTIG_39772|Fujian_spotted_paddle-tail_newt_calicivirus|CLUSTER1_Barramundi_calicivirus_1|53|15", "Zebrafish gut calicivirus", "Novel", "PRJNA484127_CONTIG_39772|Fujian_spotted_paddle-tail_newt_calicivirus", "PRJNA484127_CONTIG_39772", "Barramundi calicivirus 1", 48, 14, 1, "CLUSTER1_Barramundi_calicivirus_1|53|15", "PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0|Barramundi_calicivirus_1|NR|0|NA", 49, 15, "PRJNA484127", 39772, 234, 4.279503, 10.01403702, "Fujian spotted paddle-tail newt calicivirus", 2116168, "Viruses", "Viruses", 42.4, 0.0465, "Fujian spotted paddle-tail newt calicivirus", "Non-phage", "NR", "PRJNA484127_P_NODE_39772_length_234_cov_4.279503_g39623_i0", null, "AVM87224.1 polyprotein [Fujian spotted paddle-tail newt calicivirus]", "AVM87224.1", 2116168, "g39623", "i0", 37.8, 0.948717949, 74, 39, 89.7, 4, 211, 2, 34, 104, 222, 42.4, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Caliciviridae", null, "Fujian spotted paddle-tail newt calicivirus", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Caliciviridae;Zebrafish gut calicivirus", null, "Fujian spotted paddle-tail newt calicivirus", null, null, "Viruses", null, "Viruses", null, 42.4, null, 0.0465]], "truncated": false, "filtered_table_rows_count": 5, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"bioproject\" = :p0 and \"clusterLCA_curated\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA484127", "p1": "Zebrafish gut calicivirus"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "Novel", "label": "Novel", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus&Category=Novel", "selected": false}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "Zebrafish gut calicivirus", "label": "Zebrafish gut calicivirus", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127", "selected": true}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "Caliciviridae", "label": "Caliciviridae", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus&tax_family_NTorNR=Caliciviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "Barramundi calicivirus 1", "label": "Barramundi calicivirus 1", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus&tax_species_NTorNR=Barramundi+calicivirus+1", "selected": false}, {"value": "Dongbei arctic lamprey calicivirus 2", "label": "Dongbei arctic lamprey calicivirus 2", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus&tax_species_NTorNR=Dongbei+arctic+lamprey+calicivirus+2", "selected": false}, {"value": "Fujian spotted paddle-tail newt calicivirus", "label": "Fujian spotted paddle-tail newt calicivirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus&tax_species_NTorNR=Fujian+spotted+paddle-tail+newt+calicivirus", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA484127&clusterLCA_curated=Zebrafish+gut+calicivirus", "results": [{"value": "PRJNA484127", "label": "PRJNA484127", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?clusterLCA_curated=Zebrafish+gut+calicivirus", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 39.80457599936926}