{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where bioproject = \"PRJNA450343\"", "rows": [[3697, "PRJNA450343_CONTIG_3925|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA450343_CONTIG_3925|Cyprivirus_A", "PRJNA450343_CONTIG_3925", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA450343", 3925, 268, 1.630137, 4.36876716, "Cyprivirus A", 2304617, "Viruses", "Viruses", 440.0, 4.48e-119, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA450343_P_NODE_3925_length_268_cov_1.630137_g3857_i0", null, "Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome", "gi|2500378199|ref|NC_076245.1|", 2563826, "g3857", "i0", 96.269, 3.0, 268, 10, 100.0, 0, 1, 268, 7598, 7331, 804, 440.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|2500378199|ref|NC_076245.1|", "Viruses", "Viruses", "Viruses", "Viruses", 440.0, 172.0, 4.48e-119, 1.44e-47], [3940, "PRJNA450343_CONTIG_10001|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA450343_CONTIG_10001|Cyprivirus_A", "PRJNA450343_CONTIG_10001", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA450343", 10001, 172, 1.243902, 2.13951144, "Cyprivirus A", 2304617, "Viruses", "Viruses", 263.0, 6.12e-66, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA450343_P_NODE_10001_length_172_cov_1.243902_g9933_i0", null, "Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome", "gi|1812398529|gb|MN524064.1|", 2563826, "g9933", "i0", 94.186, 3.0, 172, 10, 100.0, 0, 1, 172, 6071, 6242, 516, 263.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|1812398529|gb|MN524064.1|", "Viruses", "Viruses", "Viruses", "Viruses", 263.0, 114.0, 6.12e-66, 1.23e-27], [9811, "PRJNA450343_CONTIG_1661|Salmovirus_WFRC1|CLUSTER1_Salmovirus_WFRC1|20|6", "Zebrafish rhabdo-like virus", "Novel", "PRJNA450343_CONTIG_1661|Salmovirus_WFRC1", "PRJNA450343_CONTIG_1661", "Salmovirus WFRC1", 37, 9, 6, "CLUSTER1_Salmovirus_WFRC1|20|6", "PRJEB2368_P_NODE_55_length_2750_cov_4.192407_g36_i0|Salmovirus_WFRC1|NR|7.9e-107|NA", 20, 6, "PRJNA450343", 1661, 428, 2.48285, 10.626598, "Salmovirus WFRC1", 1981916, "Viruses", "Viruses", 133.0, 2.24e-33, "Salmovirus WFRC1", "Non-phage", "NR", "PRJNA450343_P_NODE_1661_length_428_cov_2.482850_g1593_i0", null, "YP_009361865.1 protease [Salmovirus WFRC1]", "YP_009361865.1", 1981916, "g1593", "i0", 49.3, 1.023364486, 146, 68, 99.5, 3, 2, 427, 288, 431, 438, 133.0, 1.0, "Viruses", null, null, null, null, null, null, null, "Salmovirus WFRC1", "Viruses;Zebrafish rhabdo-like virus", null, "Salmovirus WFRC1", null, null, "Viruses", null, "Viruses", null, 133.0, null, 2.24e-33], [9812, "PRJNA450343_CONTIG_2346|Salmovirus_WFRC1|CLUSTER1_Salmovirus_WFRC1|20|6", "Zebrafish rhabdo-like virus", "Novel", "PRJNA450343_CONTIG_2346|Salmovirus_WFRC1", "PRJNA450343_CONTIG_2346", "Salmovirus WFRC1", 37, 9, 6, "CLUSTER1_Salmovirus_WFRC1|20|6", "PRJEB2368_P_NODE_55_length_2750_cov_4.192407_g36_i0|Salmovirus_WFRC1|NR|7.9e-107|NA", 20, 6, "PRJNA450343", 2346, 355, 2.660131, 9.44346505, "Salmovirus WFRC1", 1981916, "Viruses", "Viruses", 118.0, 4.86e-28, "Salmovirus WFRC1", "Non-phage", "NR", "PRJNA450343_P_NODE_2346_length_355_cov_2.660131_g2278_i0", null, "YP_009361866.1 polyprotein [Salmovirus WFRC1]", "YP_009361866.1", 1981916, "g2278", "i0", 50.0, 0.997183099, 118, 59, 99.7, 0, 354, 1, 288, 405, 354, 118.0, 1.0, "Viruses", null, null, null, null, null, null, null, "Salmovirus WFRC1", "Viruses;Zebrafish rhabdo-like virus", null, "Salmovirus WFRC1", null, null, "Viruses", null, "Viruses", null, 118.0, null, 4.86e-28], [9813, "PRJNA450343_CONTIG_3220|Salmovirus_WFRC1|CLUSTER1_Salmovirus_WFRC1|20|6", "Zebrafish rhabdo-like virus", "Novel", "PRJNA450343_CONTIG_3220|Salmovirus_WFRC1", "PRJNA450343_CONTIG_3220", "Salmovirus WFRC1", 37, 9, 6, "CLUSTER1_Salmovirus_WFRC1|20|6", "PRJEB2368_P_NODE_55_length_2750_cov_4.192407_g36_i0|Salmovirus_WFRC1|NR|7.9e-107|NA", 20, 6, "PRJNA450343", 3220, 298, 3.421687, 10.19662726, "Salmovirus WFRC1", 1981916, "Viruses", "Viruses", 58.9, 1.45e-07, "Salmovirus WFRC1", "Non-phage", "NR", "PRJNA450343_P_NODE_3220_length_298_cov_3.421687_g3152_i0", null, "YP_009361865.1 protease [Salmovirus WFRC1]", "YP_009361865.1", 1981916, "g3152", "i0", 39.5, 0.765100671, 76, 46, 76.5, 0, 2, 229, 53, 128, 228, 58.9, 1.0, "Viruses", null, null, null, null, null, null, null, "Salmovirus WFRC1", "Viruses;Zebrafish rhabdo-like virus", null, "Salmovirus WFRC1", null, null, "Viruses", null, "Viruses", null, 58.9, null, 1.45e-07], [9814, "PRJNA450343_CONTIG_6412|Salmovirus_WFRC1|CLUSTER1_Salmovirus_WFRC1|20|6", "Zebrafish rhabdo-like virus", "Novel", "PRJNA450343_CONTIG_6412|Salmovirus_WFRC1", "PRJNA450343_CONTIG_6412", "Salmovirus WFRC1", 37, 9, 6, "CLUSTER1_Salmovirus_WFRC1|20|6", "PRJEB2368_P_NODE_55_length_2750_cov_4.192407_g36_i0|Salmovirus_WFRC1|NR|7.9e-107|NA", 20, 6, "PRJNA450343", 6412, 211, 1.432099, 3.02172889, "Salmovirus WFRC1", 1981916, "Viruses", "Viruses", 49.3, 0.000122, "Salmovirus WFRC1", "Non-phage", "NR", "PRJNA450343_P_NODE_6412_length_211_cov_1.432099_g6344_i0", null, "YP_009361866.1 polyprotein [Salmovirus WFRC1]", "YP_009361866.1", 1981916, "g6344", "i0", 40.6, 0.981042654, 69, 39, 98.1, 1, 210, 4, 7, 73, 207, 49.3, 1.0, "Viruses", null, null, null, null, null, null, null, "Salmovirus WFRC1", "Viruses;Zebrafish rhabdo-like virus", null, "Salmovirus WFRC1", null, null, "Viruses", null, "Viruses", null, 49.3, null, 0.000122], [9815, "PRJNA450343_CONTIG_9151|Salmovirus_WFRC1|CLUSTER1_Salmovirus_WFRC1|20|6", "Zebrafish rhabdo-like virus", "Novel", "PRJNA450343_CONTIG_9151|Salmovirus_WFRC1", "PRJNA450343_CONTIG_9151", "Salmovirus WFRC1", 37, 9, 6, "CLUSTER1_Salmovirus_WFRC1|20|6", "PRJEB2368_P_NODE_55_length_2750_cov_4.192407_g36_i0|Salmovirus_WFRC1|NR|7.9e-107|NA", 20, 6, "PRJNA450343", 9151, 180, 1.938931, 3.4900758, "Salmovirus WFRC1", 1981916, "Viruses", "Viruses", 46.6, 0.000688, "Salmovirus WFRC1", "Non-phage", "NR", "PRJNA450343_P_NODE_9151_length_180_cov_1.938931_g9083_i0", null, "YP_009361865.1 protease [Salmovirus WFRC1]", "YP_009361865.1", 1981916, "g9083", "i0", 50.0, 0.733333333, 44, 22, 73.3, 0, 39, 170, 13, 56, 132, 46.6, 1.0, "Viruses", null, null, null, null, null, null, null, "Salmovirus WFRC1", "Viruses;Zebrafish rhabdo-like virus", null, "Salmovirus WFRC1", null, null, "Viruses", null, "Viruses", null, 46.6, null, 0.000688], [9816, "PRJNA450343_CONTIG_9943|Salmovirus_WFRC1|CLUSTER1_Salmovirus_WFRC1|20|6", "Zebrafish rhabdo-like virus", "Novel", "PRJNA450343_CONTIG_9943|Salmovirus_WFRC1", "PRJNA450343_CONTIG_9943", "Salmovirus WFRC1", 37, 9, 6, "CLUSTER1_Salmovirus_WFRC1|20|6", "PRJEB2368_P_NODE_55_length_2750_cov_4.192407_g36_i0|Salmovirus_WFRC1|NR|7.9e-107|NA", 20, 6, "PRJNA450343", 9943, 172, 2.073171, 3.56585412, "Salmovirus WFRC1", 1981916, "Viruses", "Viruses", 79.7, 1.33e-15, "Salmovirus WFRC1", "Non-phage", "NR", "PRJNA450343_P_NODE_9943_length_172_cov_2.073171_g9875_i0", null, "YP_009361866.1 polyprotein [Salmovirus WFRC1]", "YP_009361866.1", 1981916, "g9875", "i0", 57.9, 0.994186047, 57, 24, 99.4, 0, 172, 2, 144, 200, 171, 79.7, 1.0, "Viruses", null, null, null, null, null, null, null, "Salmovirus WFRC1", "Viruses;Zebrafish rhabdo-like virus", null, "Salmovirus WFRC1", null, null, "Viruses", null, "Viruses", null, 79.7, null, 1.33e-15], [10080, "PRJNA450343_CONTIG_529|Salmovirus_WFRC1|CLUSTER2_Salmovirus_WFRC1|10|5", "Zebrafish rhabdo-like virus", "Novel", "PRJNA450343_CONTIG_529|Salmovirus_WFRC1", "PRJNA450343_CONTIG_529", "Salmovirus WFRC1", 37, 9, 6, "CLUSTER2_Salmovirus_WFRC1|10|5", "PRJNA906165_P_NODE_155_length_1461_cov_3.291066_g112_i0|Salmovirus_WFRC1|NR|7.69e-84|NA", 10, 5, "PRJNA450343", 529, 787, 1.876694, 14.76958178, "Salmovirus WFRC1", 1981916, "Viruses", "Viruses", 234.0, 1.1199999999999999e-67, "Salmovirus WFRC1", "Non-phage", "NR", "PRJNA450343_P_NODE_529_length_787_cov_1.876694_g482_i0", null, "YP_009361866.1 polyprotein [Salmovirus WFRC1]", "YP_009361866.1", 1981916, "g482", "i0", 50.6, 0.972045743, 255, 117, 94.2, 3, 15, 755, 432, 685, 765, 234.0, 1.0, "Viruses", null, null, null, null, null, null, null, "Salmovirus WFRC1", "Viruses;Zebrafish rhabdo-like virus", null, "Salmovirus WFRC1", null, null, "Viruses", null, "Viruses", null, 234.0, null, 1.1199999999999999e-67]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"bioproject\" = :p0 order by rowid limit 101", "params": {"p0": "PRJNA450343"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343", "results": [{"value": "Novel", "label": "Novel", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343&Category=Novel", "selected": false}, {"value": "Known", "label": "Known", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343&Category=Known", "selected": false}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343", "results": [{"value": "Zebrafish rhabdo-like virus", "label": "Zebrafish rhabdo-like virus", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343&clusterLCA_curated=Zebrafish+rhabdo-like+virus", "selected": false}, {"value": "Zebrafish picornavirus 1", "label": "Zebrafish picornavirus 1", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343&clusterLCA_curated=Zebrafish+picornavirus+1", "selected": false}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343", "results": [{"value": "Picornaviridae", "label": "Picornaviridae", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343&tax_family_NTorNR=Picornaviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343", "results": [], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343", "results": [{"value": "Salmovirus WFRC1", "label": "Salmovirus WFRC1", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343&tax_species_NTorNR=Salmovirus+WFRC1", "selected": false}, {"value": "Cyprivirus A", "label": "Cyprivirus A", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343&tax_species_NTorNR=Cyprivirus+A", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA450343", "results": [{"value": "PRJNA450343", "label": "PRJNA450343", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 55.593558005057275}