{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where bioproject = \"PRJNA312107\"", "rows": [[1840, "PRJNA312107_CONTIG_1|Zebrafish_picornavirus_2|CLUSTER1_Zebrafish_picornavirus_2|1382|320", "Danio blood picornavirus/Zebrafish picornavirus 2", "Novel", "PRJNA312107_CONTIG_1|Zebrafish_picornavirus_2", "PRJNA312107_CONTIG_1", "Zebrafish picornavirus 2", 1369, 320, 1, "CLUSTER1_Zebrafish_picornavirus_2|1382|320", "PRJNA924006_P_NODE_1_length_7278_cov_16.682998_g0_i0|Zebrafish_picornavirus_2|NR|0|NA", 1370, 320, "PRJNA312107", 1, 7196, 13.403106, 964.4875078, "Zebrafish picornavirus 2", 3063761, "Viruses", "Viruses", 2497.0, 0.0, "Zebrafish picornavirus 2", "Non-phage", "NTclustered", "PRJNA312107_P_NODE_1_length_7196_cov_13.403106_g0_i0", null, "Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds", "gi|2551699335|gb|OK619588.1|", 3063761, "g0", "i0", 92.099, 0.666342412, 1772, 136, 67.0, 4, 1, 1770, 7098, 5329, 4795, 2497.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Zebrafish picornavirus 2", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Danio blood picornavirus/Zebrafish picornavirus 2", "Zebrafish picornavirus 2", "Zebrafish picornavirus 2", "gi|2551699335|gb|OK619588.1|", "Viruses", "Viruses", "Viruses", "Viruses", 2497.0, 2482.0, 0.0, 0.0], [5841, "PRJNA312107_CONTIG_23175|Carp_edema_virus|CLUSTER3_Carp_edema_virus|359|69", "Zebrafish jaw poxvirus", "Novel", "PRJNA312107_CONTIG_23175|Carp_edema_virus", "PRJNA312107_CONTIG_23175", "Carp edema virus", 4680, 143, 36, "CLUSTER3_Carp_edema_virus|359|69", "PRJNA318414_P_NODE_2_length_28050_cov_65.213304_g1_i0|Carp_edema_virus|NR|0|NA", 358, 69, "PRJNA312107", 23175, 165, 0.896552, 1.4793108, "Carp edema virus", 1653087, "Viruses", "Viruses", 42.0, 0.0244, "Carp edema virus", "Non-phage", "NR", "PRJNA312107_P_NODE_23175_length_165_cov_0.896552_g23009_i0", null, "BCT22717.1 B22R family protein [Carp edema virus]", "BCT22717.1", 1653087, "g23009", "i0", 40.0, 0.818181818, 45, 26, 80.0, 1, 2, 133, 873, 917, 135, 42.0, 1.0, "Viruses", "Varidnaviria", "Bamfordvirae", "Nucleocytoviricota", "Pokkesviricetes", "Chitovirales", "Poxviridae", null, "Carp edema virus", "Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus", null, "Carp edema virus", null, null, "Viruses", null, "Viruses", null, 42.0, null, 0.0244], [8999, "PRJNA312107_CONTIG_6076|Carp_edema_virus|CLUSTER20_Carp_edema_virus|75|44", "Zebrafish jaw poxvirus", "Novel", "PRJNA312107_CONTIG_6076|Carp_edema_virus", "PRJNA312107_CONTIG_6076", "Carp edema virus", 4680, 143, 36, "CLUSTER20_Carp_edema_virus|75|44", "PRJNA318414_P_NODE_7_length_17473_cov_56.726324_g6_i0|Carp_edema_virus|NR|0|NA", 69, 42, "PRJNA312107", 6076, 288, 1.305439, 3.75966432, "Carp edema virus", 1653087, "Viruses", "Viruses", 50.8, 8.59e-05, "Carp edema virus", "Non-phage", "NR", "PRJNA312107_P_NODE_6076_length_288_cov_1.305439_g5910_i0", null, "BCT22628.1 hypothetical protein [Carp edema virus]", "BCT22628.1", 1653087, "g5910", "i0", 36.2, 0.71875, 69, 43, 71.9, 1, 287, 81, 197, 264, 207, 50.8, 1.0, "Viruses", "Varidnaviria", "Bamfordvirae", "Nucleocytoviricota", "Pokkesviricetes", "Chitovirales", "Poxviridae", null, "Carp edema virus", "Viruses;Varidnaviria;Bamfordvirae;Nucleocytoviricota;Pokkesviricetes;Chitovirales;Poxviridae;Zebrafish jaw poxvirus", null, "Carp edema virus", null, null, "Viruses", null, "Viruses", null, 50.8, null, 8.59e-05], [9792, "PRJNA312107_CONTIG_21068|Nicoomyvirus|CLUSTER1_Fish-associated_parvo-like_hybrid_virus|21|14", "Fish-associated parvo-like hybrid virus", "Endogenous or not fish-associated", "PRJNA312107_CONTIG_21068|Nicoomyvirus", "PRJNA312107_CONTIG_21068", "Fish-associated parvo-like hybrid virus", 35, 19, 4, "CLUSTER1_Fish-associated_parvo-like_hybrid_virus|21|14", "MT138265_1_MAG_Nicoomyvirus_lizumae_isolate_par077par1_genomic_sequence", 21, 14, "PRJNA312107", 21068, 167, 0.881356, 1.47186452, "Nicoomyvirus", 3425078, "Viruses", "Viruses", 309.0, 7.53e-80, "Nicoomyvirus", "Non-phage", "NTclustered", "PRJNA312107_P_NODE_21068_length_167_cov_0.881356_g20902_i0", null, "Parvovirus NIH-CQV putative 15-kDa protein, putative replication associated protein (rep), and putative capsid protein (cap) genes, complete cds", "gi|530787446|ref|NC_022089.1|", 1341019, "g20902", "i0", 100.0, 15.0, 167, 0, 100.0, 0, 1, 167, 885, 1051, 2505, 309.0, 1.0, "Viruses", "Monodnaviria", "Shotokuvirae", "Cressdnaviricota", "Arfiviricetes", "Lineavirales", "Oomyviridae", "Nicoomyvirus", "Nicoomyvirus moldensis", "Viruses;Monodnaviria;Shotokuvirae;Cossaviricota;Quintoviricetes;Piccovirales;Parvoviridae;Fish-associated parvo-like hybrid virus", "Nicoomyvirus", "Parvo-like hybrid virus UC9", "gi|530787446|ref|NC_022089.1|", "Viruses", "Viruses", "Viruses", "Viruses", 309.0, 114.0, 7.53e-80, 1.47e-28], [9968, "PRJNA312107_CONTIG_18951|Grus_japonensis_parvo-like_hybrid_virus|CLUSTER2_Fish-associated_parvo-like_hybrid_virus|14|7", "Fish-associated parvo-like hybrid virus", "Endogenous or not fish-associated", "PRJNA312107_CONTIG_18951|Grus_japonensis_parvo-like_hybrid_virus", "PRJNA312107_CONTIG_18951", "Fish-associated parvo-like hybrid virus", 35, 19, 4, "CLUSTER2_Fish-associated_parvo-like_hybrid_virus|14|7", "PRJNA784979_S_NODE_320_length_2507_cov_3.719284_g317_i0|Fish-associated_parvo-like_hybrid_virus|NTclustered|0|NA", 14, 7, "PRJNA312107", 18951, 169, 0.866667, 1.46466723, "Grus japonensis parvo-like hybrid virus", 2794511, "Viruses", "Viruses", 45.1, 0.0021, "Grus japonensis parvo-like hybrid virus", "Non-phage", "NR", "PRJNA312107_P_NODE_18951_length_169_cov_0.866667_g18785_i0", null, "QTZ83196.1 MAG: capsid protein [Grus japonensis parvo-like hybrid virus]", "QTZ83196.1", 2794511, "g18785", "i0", 64.5, 0.550295858, 31, 11, 55.0, 0, 1, 93, 299, 329, 93, 45.1, 1.0, "Viruses", "Monodnaviria", "Shotokuvirae", "Cressdnaviricota", "Arfiviricetes", "Lineavirales", "Oomyviridae", "Nicoomyvirus", "Nicoomyvirus peneszensis", "Viruses;Monodnaviria;Shotokuvirae;Cossaviricota;Quintoviricetes;Piccovirales;Parvoviridae;Fish-associated parvo-like hybrid virus", null, "Grus japonensis parvo-like hybrid virus", null, null, "Viruses", null, "Viruses", null, 45.1, null, 0.0021], [10218, "PRJNA312107_CONTIG_25980|Psittaciform_aveparvovirus|CLUSTER2_Psittacidae_aveparvovirus|3|3", "Psittacidae aveparvovirus", "Endogenous or not fish-associated", "PRJNA312107_CONTIG_25980|Psittaciform_aveparvovirus", "PRJNA312107_CONTIG_25980", "Psittacidae aveparvovirus", 18, 10, 4, "CLUSTER2_Psittacidae_aveparvovirus|3|3", "PRJNA630162_P_NODE_16732_length_457_cov_2.938725_g15229_i0|Psittacidae_aveparvovirus|NR|1.21e-18|NA", 3, 3, "PRJNA312107", 25980, 162, 0.920354, 1.49097348, "Psittaciform aveparvovirus", 3042447, "Viruses", "Viruses", 43.9, 0.00498, "Psittaciform aveparvovirus", "Non-phage", "NR", "PRJNA312107_P_NODE_25980_length_162_cov_0.920354_g25814_i0", null, "WGL41068.1 replication protein [Psittaciform aveparvovirus]", "WGL41068.1", 3042447, "g25814", "i0", 37.0, 1.0, 54, 26, 94.4, 2, 156, 4, 9, 57, 162, 43.9, 1.0, "Viruses", "Monodnaviria", "Shotokuvirae", "Cossaviricota", "Quintoviricetes", "Piccovirales", "Parvoviridae", "Aveparvovirus", "Psittaciform aveparvovirus", "Viruses;Monodnaviria;Shotokuvirae;Cossaviricota;Quintoviricetes;Piccovirales;Parvoviridae;Aveparvovirus;Psittacidae aveparvovirus", null, "Psittaciform aveparvovirus", null, null, "Viruses", null, "Viruses", null, 43.9, null, 0.00498]], "truncated": false, "filtered_table_rows_count": 6, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"bioproject\" = :p0 order by rowid limit 101", "params": {"p0": "PRJNA312107"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107", "results": [{"value": "Endogenous or not fish-associated", "label": "Endogenous or not fish-associated", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&Category=Endogenous+or+not+fish-associated", "selected": false}, {"value": "Novel", "label": "Novel", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&Category=Novel", "selected": false}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107", "results": [{"value": "Fish-associated parvo-like hybrid virus", "label": "Fish-associated parvo-like hybrid virus", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&clusterLCA_curated=Fish-associated+parvo-like+hybrid+virus", "selected": false}, {"value": "Zebrafish jaw poxvirus", "label": "Zebrafish jaw poxvirus", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&clusterLCA_curated=Zebrafish+jaw+poxvirus", "selected": false}, {"value": "Danio blood picornavirus/Zebrafish picornavirus 2", "label": "Danio blood picornavirus/Zebrafish picornavirus 2", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&clusterLCA_curated=Danio+blood+picornavirus%2FZebrafish+picornavirus+2", "selected": false}, {"value": "Psittacidae aveparvovirus", "label": "Psittacidae aveparvovirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&clusterLCA_curated=Psittacidae+aveparvovirus", "selected": false}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107", "results": [{"value": "Oomyviridae", "label": "Oomyviridae", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_family_NTorNR=Oomyviridae", "selected": false}, {"value": "Poxviridae", "label": "Poxviridae", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_family_NTorNR=Poxviridae", "selected": false}, {"value": "Parvoviridae", "label": "Parvoviridae", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_family_NTorNR=Parvoviridae", "selected": false}, {"value": "Picornaviridae", "label": "Picornaviridae", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_family_NTorNR=Picornaviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107", "results": [{"value": "Nicoomyvirus", "label": "Nicoomyvirus", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_genus_NTorNR=Nicoomyvirus", "selected": false}, {"value": "Aveparvovirus", "label": "Aveparvovirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_genus_NTorNR=Aveparvovirus", "selected": false}], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107", "results": [{"value": "Carp edema virus", "label": "Carp edema virus", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_species_NTorNR=Carp+edema+virus", "selected": false}, {"value": "Nicoomyvirus moldensis", "label": "Nicoomyvirus moldensis", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_species_NTorNR=Nicoomyvirus+moldensis", "selected": false}, {"value": "Nicoomyvirus peneszensis", "label": "Nicoomyvirus peneszensis", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_species_NTorNR=Nicoomyvirus+peneszensis", "selected": false}, {"value": "Psittaciform aveparvovirus", "label": "Psittaciform aveparvovirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_species_NTorNR=Psittaciform+aveparvovirus", "selected": false}, {"value": "Zebrafish picornavirus 2", "label": "Zebrafish picornavirus 2", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107&tax_species_NTorNR=Zebrafish+picornavirus+2", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA312107", "results": [{"value": "PRJNA312107", "label": "PRJNA312107", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 59.90883499998745}