{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1108487\"", "rows": [[10211, "PRJNA1108487_CONTIG_178|Betanodavirus|CLUSTER1_Betanodavirus|3|2", "Redspotted grouper nervous necrosis virus", "Known", "PRJNA1108487_CONTIG_178|Betanodavirus", "PRJNA1108487_CONTIG_178", "Betanodavirus", 4, 2, 3, "CLUSTER1_Betanodavirus|3|2", "PRJNA799765_P_NODE_127_length_1457_cov_652.555398_g101_i0|Betanodavirus|NTclustered|0|NA", 3, 2, "PRJNA1108487", 178, 1328, 14.647012, 194.5123194, "Betanodavirus", 143919, "Viruses", "Viruses", 2398.0, 0.0, "Betanodavirus", "Non-phage", "NTclustered", "PRJNA1108487_P_NODE_178_length_1328_cov_14.647012_g143_i0", null, "Redspotted grouper nervous necrosis virus RNA 2, complete sequence", "gi|98960854|ref|NC_008041.1|", 43763, "g143", "i0", 99.247, 96.0873494, 1328, 10, 100.0, 0, 1, 1328, 11, 1338, 127604, 2398.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Kitrinoviricota", "Magsaviricetes", "Nodamuvirales", "Nodaviridae", "Betanodavirus", "Betanodavirus epinepheli", "Viruses;Riboviria;Orthornavirae;Kitrinoviricota;Magsaviricetes;Nodamuvirales;Nodaviridae;Betanodavirus;Redspotted grouper nervous necrosis virus", "Betanodavirus", "Orange-spotted grouper nervous necrosis virus", "gi|98960854|ref|NC_008041.1|", "Viruses", "Viruses", "Viruses", "Viruses", 2398.0, 678.0, 0.0, 2.6599999999999997e-244], [10256, "PRJNA1108487_CONTIG_9875|Snakehead_retrovirus|CLUSTER1_Snakehead_retrovirus|2|1", "Snakehead retrovirus", "Insufficient Evidence", "PRJNA1108487_CONTIG_9875|Snakehead_retrovirus", "PRJNA1108487_CONTIG_9875", "Snakehead retrovirus", 1, 1, 1, "CLUSTER1_Snakehead_retrovirus|2|1", "NC_001724_1_Snakehead_retrovirus_complete_genome", 2, 1, "PRJNA1108487", 9875, 247, 0.896552, 2.21448344, "Snakehead retrovirus", 40270, "Viruses", "Viruses", 457.0, 4.0500000000000005e-124, "Snakehead retrovirus", "Non-phage", "NTclustered", "PRJNA1108487_P_NODE_9875_length_247_cov_0.896552_g9809_i0", null, "Snakehead retrovirus, complete genome", "gi|9628892|ref|NC_001724.1|", 40270, "g9809", "i0", 100.0, 2.0, 247, 0, 100.0, 0, 1, 247, 8274, 8520, 494, 457.0, 1.0, "Viruses", "Riboviria", "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", null, "Snakehead retrovirus", "Viruses;Riboviria;Pararnavirae;Artverviricota;Revtraviricetes;Ortervirales;Retroviridae;Snakehead retrovirus", "Snakehead retrovirus", "Snakehead retrovirus", "gi|9628892|ref|NC_001724.1|", "Viruses", "Viruses", "Viruses", "Viruses", 457.0, 166.0, 4.0500000000000005e-124, 2.0699999999999998e-45], [10284, "PRJNA1108487_CONTIG_17|Betanodavirus_epinepheli|CLUSTER1_Betanodavirus_epinepheli|1|1", "Redspotted grouper nervous necrosis virus", "Known", "PRJNA1108487_CONTIG_17|Betanodavirus_epinepheli", "PRJNA1108487_CONTIG_17", "Betanodavirus epinepheli", 4, 2, 3, "CLUSTER1_Betanodavirus_epinepheli|1|1", "PRJNA1108487_P_NODE_17_length_3045_cov_11.845559_g13_i0|Betanodavirus_epinepheli|NTclustered|0|NA", 1, 1, "PRJNA1108487", 17, 3045, 11.845559, 360.6972716, "Betanodavirus epinepheli", 3427237, "Viruses", "Viruses", 5502.0, 0.0, "Betanodavirus epinepheli", "Non-phage", "NTclustered", "PRJNA1108487_P_NODE_17_length_3045_cov_11.845559_g13_i0", null, "Redspotted grouper nervous necrosis virus isolate China 1 RNA-dependent RNA polymerase gene, complete cds", "gi|156076357|gb|EF558368.1|", 43763, "g13", "i0", 99.278, 99.07192118, 3045, 22, 100.0, 0, 1, 3045, 3057, 13, 301674, 5502.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Kitrinoviricota", "Magsaviricetes", "Nodamuvirales", "Nodaviridae", "Betanodavirus", "Betanodavirus epinepheli", "Viruses;Riboviria;Orthornavirae;Kitrinoviricota;Magsaviricetes;Nodamuvirales;Nodaviridae;Betanodavirus;Redspotted grouper nervous necrosis virus", "Betanodavirus epinepheli", "Redspotted grouper nervous necrosis virus", "gi|156076357|gb|EF558368.1|", "Viruses", "Viruses", "Viruses", "Viruses", 5502.0, 1961.0, 0.0, 0.0]], "truncated": false, "filtered_table_rows_count": 3, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"bioproject\" = :p0 order by rowid limit 101", "params": {"p0": "PRJNA1108487"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487", "results": [{"value": "Known", "label": "Known", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487&Category=Known", "selected": false}, {"value": "Insufficient Evidence", "label": "Insufficient Evidence", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487&Category=Insufficient+Evidence", "selected": false}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487", "results": [{"value": "Redspotted grouper nervous necrosis virus", "label": "Redspotted grouper nervous necrosis virus", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487&clusterLCA_curated=Redspotted+grouper+nervous+necrosis+virus", "selected": false}, {"value": "Snakehead retrovirus", "label": "Snakehead retrovirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487&clusterLCA_curated=Snakehead+retrovirus", "selected": false}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487", "results": [{"value": "Nodaviridae", "label": "Nodaviridae", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487&tax_family_NTorNR=Nodaviridae", "selected": false}, {"value": "Retroviridae", "label": "Retroviridae", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487&tax_family_NTorNR=Retroviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487", "results": [{"value": "Betanodavirus", "label": "Betanodavirus", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487&tax_genus_NTorNR=Betanodavirus", "selected": false}], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487", "results": [{"value": "Betanodavirus epinepheli", "label": "Betanodavirus epinepheli", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487&tax_species_NTorNR=Betanodavirus+epinepheli", "selected": false}, {"value": "Snakehead retrovirus", "label": "Snakehead retrovirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487&tax_species_NTorNR=Snakehead+retrovirus", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1108487", "results": [{"value": "PRJNA1108487", "label": "PRJNA1108487", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 36.71823199965729}