{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1105232\"", "rows": [[3513, "PRJNA1105232_CONTIG_1576|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA1105232_CONTIG_1576|Cyprivirus_A", "PRJNA1105232_CONTIG_1576", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA1105232", 1576, 410, 48.66759, 199.537119, "Cyprivirus A", 2304617, "Viruses", "Viruses", 712.0, 0.0, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA1105232_S_NODE_1576_length_410_cov_48.667590_g1361_i0", null, "Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome", "gi|1812398529|gb|MN524064.1|", 2563826, "g1361", "i0", 98.049, 4.263414634, 410, 7, 100.0, 1, 1, 410, 8221, 7813, 1748, 712.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", null, "gi|1812398529|gb|MN524064.1|", "Viruses", null, "Viruses", null, 712.0, null, 0.0, null], [4009, "PRJNA1105232_CONTIG_12651|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA1105232_CONTIG_12651|Cyprivirus_A", "PRJNA1105232_CONTIG_12651", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA1105232", 12651, 183, 1.014925, 1.85731275, "Cyprivirus A", 2304617, "Viruses", "Viruses", 250.0, 5.15e-62, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA1105232_S_NODE_12651_length_183_cov_1.014925_g12435_i0", null, "Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome", "gi|2500378199|ref|NC_076245.1|", 2563826, "g12435", "i0", 98.582, 3.06557377, 141, 2, 100.0, 0, 43, 183, 5635, 5495, 561, 250.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|2500378199|ref|NC_076245.1|", "Viruses", "Viruses", "Viruses", "Viruses", 250.0, 95.1, 5.15e-62, 5.8900000000000004e-21], [9167, "PRJNA1105232_CONTIG_7797|Piscichuvirus|CLUSTER1_Salarius_guttatus_piscichuvirus|63|56", "Salarius guttatus piscichuvirus", "Endogenous or not fish-associated", "PRJNA1105232_CONTIG_7797|Piscichuvirus", "PRJNA1105232_CONTIG_7797", "Salarius guttatus piscichuvirus", 67, 58, 5, "CLUSTER1_Salarius_guttatus_piscichuvirus|63|56", "PRJNA649806_P_NODE_3355_length_644_cov_1.443082_g3086_i0|Salarius_guttatus_piscichuvirus|NR|7.17e-28|NA", 63, 56, "PRJNA1105232", 7797, 222, 3.606936, 8.00739792, "Piscichuvirus", 2842963, "Viruses", "Viruses", 59.7, 3e-08, "Piscichuvirus", "Non-phage", "NR", "PRJNA1105232_S_NODE_7797_length_222_cov_3.606936_g7581_i0", null, "QHX39772.1 RNA-dependent RNA polymerase [Herr Frank virus 1]", "QHX39772.1", 2847181, "g7581", "i0", 44.6, 2.0, 74, 39, 97.3, 1, 221, 6, 6, 79, 444, 59.7, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Jingchuvirales", "Chuviridae", "Piscichuvirus", "Piscichuvirus franki", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Jingchuvirales;Chuviridae;Piscichuvirus;Salarius guttatus piscichuvirus", null, "Piscichuvirus", null, null, "Viruses", null, "Viruses", null, 59.7, null, 3e-08], [9384, "PRJNA1105232_CONTIG_15848|Pimephales_minnow_adintovirus|CLUSTER1_Pimephales_minnow_adintovirus|59|59", "Pimephales minnow adintovirus", "Endogenous or not fish-associated", "PRJNA1105232_CONTIG_15848|Pimephales_minnow_adintovirus", "PRJNA1105232_CONTIG_15848", "Pimephales minnow adintovirus", 168, 104, 20, "CLUSTER1_Pimephales_minnow_adintovirus|59|59", "PRJNA551453_P_NODE_4881_length_284_cov_1.883117_g4799_i0|Pimephales_minnow_adintovirus|NR|1.25e-07|NA", 52, 52, "PRJNA1105232", 15848, 167, 0.881356, 1.47186452, "Pimephales minnow adintovirus", 2609864, "Viruses", "Viruses", 58.2, 2.82e-08, "Pimephales minnow adintovirus", "Non-phage", "NR", "PRJNA1105232_S_NODE_15848_length_167_cov_0.881356_g15632_i0", null, "DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus]", "DAC81394.1", 2609864, "g15632", "i0", 69.4, 0.646706587, 36, 11, 64.7, 0, 110, 3, 7, 42, 108, 58.2, 1.0, "Viruses", "Varidnaviria", "Bamfordvirae", "Preplasmiviricota", "Polintoviricetes", "Orthopolintovirales", "Adintoviridae", null, "Pimephales minnow adintovirus", "Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Pimephales minnow adintovirus", null, "Pimephales minnow adintovirus", null, null, "Viruses", null, "Viruses", null, 58.2, null, 2.82e-08], [9981, "PRJNA1105232_CONTIG_12917|Adintovirus_anguilla1|CLUSTER1_Adintovirus_anguilla1|13|12", "Adintovirus anguilla10665", "Endogenous or not fish-associated", "PRJNA1105232_CONTIG_12917|Adintovirus_anguilla1", "PRJNA1105232_CONTIG_12917", "Adintovirus anguilla1", 34, 19, 10, "CLUSTER1_Adintovirus_anguilla1|13|12", "PRJNA1034995_S_NODE_18603_length_409_cov_23.456284_g18448_i0|Astyanax_tetra_cavefish_adintovirus|NR|1.59e-05|NA", 13, 12, "PRJNA1105232", 12917, 181, 2.05303, 3.7159843, "Adintovirus anguilla1", 3115889, "Viruses", "Viruses", 63.9, 6.96e-11, "Adintovirus anguilla1", "Non-phage", "NR", "PRJNA1105232_S_NODE_12917_length_181_cov_2.053030_g12701_i0", null, "DBA49781.1 MAG TPA_asm: Cupiennin [Adintovirus anguilla10665]", "DBA49781.1", 3115889, "g12701", "i0", 62.2, 0.745856354, 45, 17, 74.6, 0, 171, 37, 7, 51, 135, 63.9, 1.0, "Viruses", "Varidnaviria", "Bamfordvirae", "Preplasmiviricota", "Polintoviricetes", "Orthopolintovirales", "Adintoviridae", null, "Adintovirus anguilla10665", "Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Adintovirus anguilla10665", null, "Adintovirus anguilla1", null, null, "Viruses", null, "Viruses", null, 63.9, null, 6.96e-11]], "truncated": false, "filtered_table_rows_count": 5, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"bioproject\" = :p0 order by rowid limit 101", "params": {"p0": "PRJNA1105232"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232", "results": [{"value": "Endogenous or not fish-associated", "label": "Endogenous or not fish-associated", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&Category=Endogenous+or+not+fish-associated", "selected": false}, {"value": "Known", "label": "Known", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&Category=Known", "selected": false}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232", "results": [{"value": "Zebrafish picornavirus 1", "label": "Zebrafish picornavirus 1", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&clusterLCA_curated=Zebrafish+picornavirus+1", "selected": false}, {"value": "Adintovirus anguilla10665", "label": "Adintovirus anguilla10665", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&clusterLCA_curated=Adintovirus+anguilla10665", "selected": false}, {"value": "Pimephales minnow adintovirus", "label": "Pimephales minnow adintovirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&clusterLCA_curated=Pimephales+minnow+adintovirus", "selected": false}, {"value": "Salarius guttatus piscichuvirus", "label": "Salarius guttatus piscichuvirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&clusterLCA_curated=Salarius+guttatus+piscichuvirus", "selected": false}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232", "results": [{"value": "Adintoviridae", "label": "Adintoviridae", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&tax_family_NTorNR=Adintoviridae", "selected": false}, {"value": "Picornaviridae", "label": "Picornaviridae", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&tax_family_NTorNR=Picornaviridae", "selected": false}, {"value": "Chuviridae", "label": "Chuviridae", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&tax_family_NTorNR=Chuviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232", "results": [{"value": "Piscichuvirus", "label": "Piscichuvirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&tax_genus_NTorNR=Piscichuvirus", "selected": false}], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232", "results": [{"value": "Cyprivirus A", "label": "Cyprivirus A", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&tax_species_NTorNR=Cyprivirus+A", "selected": false}, {"value": "Adintovirus anguilla10665", "label": "Adintovirus anguilla10665", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&tax_species_NTorNR=Adintovirus+anguilla10665", "selected": false}, {"value": "Pimephales minnow adintovirus", "label": "Pimephales minnow adintovirus", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&tax_species_NTorNR=Pimephales+minnow+adintovirus", "selected": false}, {"value": "Piscichuvirus franki", "label": "Piscichuvirus franki", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232&tax_species_NTorNR=Piscichuvirus+franki", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1105232", "results": [{"value": "PRJNA1105232", "label": "PRJNA1105232", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 58.72852299944498}