{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where bioproject = \"PRJNA1011833\" and clusterLCA_curated = \"Spring viraemia of carp virus\"", "rows": [[350, "PRJNA1011833_CONTIG_3895|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA1011833_CONTIG_3895|Sprivivirus_cyprinus", "PRJNA1011833_CONTIG_3895", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA1011833", 3895, 504, 13.518438, 68.13292752, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 887.0, 0.0, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA1011833_S_NODE_3895_length_504_cov_13.518438_g3495_i0", null, "Spring viremia of carp virus isolate BJ0505-2, complete genome", "gi|158252063|gb|EU177782.1|", 696863, "g3495", "i0", 98.413, 30.74404762, 504, 8, 100.0, 0, 1, 504, 1389, 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"NTclustered", "PRJNA1011833_S_NODE_6090_length_439_cov_10.704545_g5677_i0", null, "Spring viraemia of carp virus isolate 566087-1 phosphoprotein (P) gene, partial cds; matrix (M) and glycoprotein (G) genes, complete cds; and RNA dependent RNA polymerase (L) gene, partial cds", "gi|387273543|gb|JQ666283.1|", 696863, "g5677", "i0", 98.633, 47.3166287, 439, 6, 100.0, 0, 1, 439, 396, 834, 20772, 778.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|387273543|gb|JQ666283.1|", "Viruses", "Viruses", "Viruses", "Viruses", 778.0, 308.0, 0.0, 1.0899999999999999e-104], [612, "PRJNA1011833_CONTIG_7404|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", 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cyprinus", "Sprivivirus cyprinus", "gi|165940616|gb|EU370915.1|", "Viruses", "Viruses", "Viruses", "Viruses", 723.0, 202.0, 0.0, 5.079999999999999e-60], [930, "PRJNA1011833_CONTIG_11016|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA1011833_CONTIG_11016|Sprivivirus_cyprinus", "PRJNA1011833_CONTIG_11016", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA1011833", 11016, 356, 10.29393, 36.6463908, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 625.0, 1.5799999999999999e-174, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA1011833_S_NODE_11016_length_356_cov_10.293930_g10597_i0", null, "Spring viremia of carp virus strain OMG067 phosphoprotein (P) gene, complete cds", "gi|115503435|gb|DQ916053.1|", 696863, "g10597", "i0", 98.315, 53.5758427, 356, 6, 100.0, 0, 1, 356, 569, 924, 19073, 625.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|115503435|gb|DQ916053.1|", "Viruses", "Viruses", "Viruses", "Viruses", 625.0, 230.0, 1.5799999999999999e-174, 2.95e-73], [1306, "PRJNA1011833_CONTIG_18825|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA1011833_CONTIG_18825|Sprivivirus_cyprinus", "PRJNA1011833_CONTIG_18825", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA1011833", 18825, 279, 1.758475, 4.90614525, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 516.0, 7.58e-142, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA1011833_S_NODE_18825_length_279_cov_1.758475_g18405_i0", null, "Spring viraemia of carp virus isolate A1, complete genome", "gi|89280756|gb|DQ097384.2|", 696863, "g18405", "i0", 100.0, 20.0, 279, 0, 100.0, 0, 1, 279, 10707, 10985, 5580, 516.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|89280756|gb|DQ097384.2|", "Viruses", "Viruses", "Viruses", "Viruses", 516.0, 183.0, 7.58e-142, 2.1e-51], [1593, "PRJNA1011833_CONTIG_26426|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA1011833_CONTIG_26426|Sprivivirus_cyprinus", "PRJNA1011833_CONTIG_26426", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA1011833", 26426, 231, 1.276596, 2.94893676, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 422.0, 1.37e-113, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA1011833_S_NODE_26426_length_231_cov_1.276596_g26006_i0", null, "Spring viremia of carp virus strain 980619 phosphoprotein (P) gene, complete cds", "gi|124699170|gb|DQ916051.1|", 696863, "g26006", "i0", 99.567, 49.74025974, 231, 1, 100.0, 0, 1, 231, 462, 232, 11490, 422.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|124699170|gb|DQ916051.1|", "Viruses", "Viruses", "Viruses", "Viruses", 422.0, 150.0, 1.37e-113, 6.63e-43], [1824, "PRJNA1011833_CONTIG_35429|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA1011833_CONTIG_35429|Sprivivirus_cyprinus", "PRJNA1011833_CONTIG_35429", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA1011833", 35429, 196, 2.509804, 4.91921584, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 331.0, 1.94e-86, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA1011833_S_NODE_35429_length_196_cov_2.509804_g35009_i0", null, "Sprivivirus cyprinus isolate SVCV_2022, complete genome", "gi|2490825611|gb|OP495631.1|", 696863, "g35009", "i0", 98.404, 20.1377551, 188, 3, 96.0, 0, 9, 196, 555, 368, 3947, 331.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|2490825611|gb|OP495631.1|", "Viruses", "Viruses", "Viruses", "Viruses", 331.0, 128.0, 1.94e-86, 1.29e-33], [1825, "PRJNA1011833_CONTIG_39973|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA1011833_CONTIG_39973|Sprivivirus_cyprinus", "PRJNA1011833_CONTIG_39973", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA1011833", 39973, 184, 1.361702, 2.50553168, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 335.0, 1.39e-87, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA1011833_S_NODE_39973_length_184_cov_1.361702_g39553_i0", null, "Spring viremia of carp virus isolate 0504 glycoprotein (G) gene, complete cds", "gi|165940616|gb|EU370915.1|", 696863, "g39553", "i0", 99.457, 64.69565217, 184, 1, 100.0, 0, 1, 184, 542, 359, 11904, 335.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|165940616|gb|EU370915.1|", "Viruses", "Viruses", "Viruses", "Viruses", 335.0, 134.0, 1.39e-87, 1.78e-37]], "truncated": false, "filtered_table_rows_count": 8, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"bioproject\" = :p0 and \"clusterLCA_curated\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA1011833", "p1": "Spring viraemia of carp virus"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1011833&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Known", "label": "Known", "count": 8, "toggle_url": 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"count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1011833&clusterLCA_curated=Spring+viraemia+of+carp+virus&tax_family_NTorNR=Rhabdoviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1011833&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Sprivivirus", "label": "Sprivivirus", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1011833&clusterLCA_curated=Spring+viraemia+of+carp+virus&tax_genus_NTorNR=Sprivivirus", "selected": false}], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1011833&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Sprivivirus cyprinus", "label": "Sprivivirus cyprinus", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1011833&clusterLCA_curated=Spring+viraemia+of+carp+virus&tax_species_NTorNR=Sprivivirus+cyprinus", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1011833&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "PRJNA1011833", "label": "PRJNA1011833", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?clusterLCA_curated=Spring+viraemia+of+carp+virus", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 45.47414199987543}