{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where Category = \"Known\", bioproject = \"PRJNA893568\" and clusterLCA_curated = \"Spring viraemia of carp virus\"", "rows": [[74, "PRJNA893568_CONTIG_155|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA893568_CONTIG_155|Sprivivirus_cyprinus", "PRJNA893568_CONTIG_155", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA893568", 155, 1317, 8.771704, 115.5233417, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 2433.0, 0.0, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA893568_P_NODE_155_length_1317_cov_8.771704_g111_i0", null, "Spring Viremia of Carp complete genome, genomic RNA", "gi|15211934|emb|AJ318079.1|", 696863, "g111", "i0", 100.0, 24.76537585, 1317, 0, 100.0, 0, 1, 1317, 1391, 75, 32616, 2433.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|15211934|emb|AJ318079.1|", "Viruses", "Viruses", "Viruses", "Viruses", 2433.0, 833.0, 0.0, 1.83e-291], [91, "PRJNA893568_CONTIG_336|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA893568_CONTIG_336|Sprivivirus_cyprinus", "PRJNA893568_CONTIG_336", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA893568", 336, 951, 7.321185, 69.62446935, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 1757.0, 0.0, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA893568_P_NODE_336_length_951_cov_7.321185_g266_i0", null, "Spring Viremia of Carp complete genome, genomic RNA", "gi|15211934|emb|AJ318079.1|", 696863, "g266", "i0", 100.0, 53.76025237, 951, 0, 100.0, 0, 1, 951, 2362, 1412, 51126, 1757.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|15211934|emb|AJ318079.1|", "Viruses", "Viruses", "Viruses", "Viruses", 1757.0, 599.0, 0.0, 1.49e-215], [120, "PRJNA893568_CONTIG_655|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA893568_CONTIG_655|Sprivivirus_cyprinus", "PRJNA893568_CONTIG_655", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA893568", 655, 688, 5.356098, 36.84995424, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 1271.0, 0.0, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA893568_P_NODE_655_length_688_cov_5.356098_g565_i0", null, "Spring Viremia of Carp complete genome, genomic RNA", "gi|15211934|emb|AJ318079.1|", 696863, "g565", "i0", 100.0, 47.76453488, 688, 0, 100.0, 0, 1, 688, 2378, 3065, 32862, 1271.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|15211934|emb|AJ318079.1|", "Viruses", "Viruses", "Viruses", "Viruses", 1271.0, 467.0, 0.0, 3.61e-166], [133, "PRJNA893568_CONTIG_833|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA893568_CONTIG_833|Sprivivirus_cyprinus", "PRJNA893568_CONTIG_833", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA893568", 833, 609, 2.259328, 13.75930752, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 1120.0, 0.0, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA893568_P_NODE_833_length_609_cov_2.259328_g736_i0", null, "Spring viremia of carp virus gene for glycoprotein", "gi|547475|emb|Z37505.1|", 696863, "g736", "i0", 99.836, 93.98522167, 609, 1, 100.0, 0, 1, 609, 410, 1018, 57237, 1120.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|547475|emb|Z37505.1|", "Viruses", "Viruses", "Viruses", "Viruses", 1120.0, 435.0, 0.0, 8.24e-150], [148, "PRJNA893568_CONTIG_1046|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA893568_CONTIG_1046|Sprivivirus_cyprinus", "PRJNA893568_CONTIG_1046", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA893568", 1046, 548, 5.252632, 28.78442336, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 1007.0, 0.0, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA893568_P_NODE_1046_length_548_cov_5.252632_g946_i0", null, "Spring Viremia of Carp complete genome, genomic RNA", "gi|15211934|emb|AJ318079.1|", 696863, "g946", "i0", 99.818, 70.75, 548, 1, 100.0, 0, 1, 548, 4093, 4640, 38771, 1007.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|15211934|emb|AJ318079.1|", "Viruses", "Viruses", "Viruses", "Viruses", 1007.0, 358.0, 0.0, 7e-120], [190, "PRJNA893568_CONTIG_1779|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA893568_CONTIG_1779|Sprivivirus_cyprinus", "PRJNA893568_CONTIG_1779", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA893568", 1779, 421, 2.359195, 9.93221095, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 778.0, 0.0, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA893568_P_NODE_1779_length_421_cov_2.359195_g1678_i0", null, "Spring Viremia of Carp complete genome, genomic RNA", "gi|15211934|emb|AJ318079.1|", 696863, "g1678", "i0", 100.0, 19.79572447, 421, 0, 100.0, 0, 1, 421, 10313, 10733, 8334, 778.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|15211934|emb|AJ318079.1|", "Viruses", "Viruses", "Viruses", "Viruses", 778.0, 263.0, 0.0, 2.81e-78], [399, "PRJNA893568_CONTIG_4489|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA893568_CONTIG_4489|Sprivivirus_cyprinus", "PRJNA893568_CONTIG_4489", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA893568", 4489, 265, 2.802083, 7.42551995, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 490.0, 4.3299999999999995e-134, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA893568_P_NODE_4489_length_265_cov_2.802083_g4388_i0", null, "Spring viremia of carp virus gene for glycoprotein", "gi|547475|emb|Z37505.1|", 696863, "g4388", "i0", 100.0, 66.46415094, 265, 0, 100.0, 0, 1, 265, 122, 386, 17613, 490.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|547475|emb|Z37505.1|", "Viruses", "Viruses", "Viruses", "Viruses", 490.0, 193.0, 4.3299999999999995e-134, 2.5400000000000002e-57], [480, "PRJNA893568_CONTIG_5578|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA893568_CONTIG_5578|Sprivivirus_cyprinus", "PRJNA893568_CONTIG_5578", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA893568", 5578, 247, 1.344828, 3.32172516, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 457.0, 4.0500000000000005e-124, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA893568_P_NODE_5578_length_247_cov_1.344828_g5477_i0", null, "Spring Viremia of Carp complete genome, genomic RNA", "gi|15211934|emb|AJ318079.1|", 696863, "g5477", "i0", 100.0, 20.0, 247, 0, 100.0, 0, 1, 247, 9677, 9923, 4940, 457.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|15211934|emb|AJ318079.1|", "Viruses", "Viruses", "Viruses", "Viruses", 457.0, 180.0, 4.0500000000000005e-124, 2.24e-50]], "truncated": false, "filtered_table_rows_count": 8, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"Category\" = :p0 and \"bioproject\" = :p1 and \"clusterLCA_curated\" = :p2 order by rowid limit 101", "params": {"p0": "Known", "p1": "PRJNA893568", "p2": "Spring viraemia of carp virus"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Known", "label": "Known", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus", "selected": true}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Spring viraemia of carp virus", "label": "Spring viraemia of carp virus", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568", "selected": true}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Rhabdoviridae", "label": "Rhabdoviridae", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus&tax_family_NTorNR=Rhabdoviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Sprivivirus", "label": "Sprivivirus", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus&tax_genus_NTorNR=Sprivivirus", "selected": false}], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Sprivivirus cyprinus", "label": "Sprivivirus cyprinus", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus&tax_species_NTorNR=Sprivivirus+cyprinus", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA893568&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "PRJNA893568", "label": "PRJNA893568", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&clusterLCA_curated=Spring+viraemia+of+carp+virus", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 46.9489879997127}