{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where Category = \"Known\", bioproject = \"PRJNA690234\" and clusterLCA_curated = \"Spring viraemia of carp virus\"", "rows": [[10, "PRJNA690234_CONTIG_3|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA690234_CONTIG_3|Sprivivirus_cyprinus", "PRJNA690234_CONTIG_3", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA690234", 3, 6313, 53.996635, 3408.807568, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 11293.0, 0.0, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA690234_P_NODE_3_length_6313_cov_53.996635_g2_i0", null, "Spring viraemia of carp virus isolate A1, complete genome", "gi|89280756|gb|DQ097384.2|", 696863, "g2", "i0", 98.955, 21.86028829, 6314, 64, 100.0, 2, 1, 6313, 11080, 4768, 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"PRJNA690234_P_NODE_5_length_5428_cov_1272.131653_g4_i0", null, "Spring viraemia of carp virus isolate A1, complete genome", "gi|89280756|gb|DQ097384.2|", 696863, "g4", "i0", 97.925, 38.62269713, 2603, 50, 100.0, 4, 2709, 5307, 2761, 159, 209644, 4505.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|89280756|gb|DQ097384.2|", "Viruses", "Viruses", "Viruses", "Viruses", 4505.0, 767.0, 0.0, 3.1e-259], [22, "PRJNA690234_CONTIG_8|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA690234_CONTIG_8|Sprivivirus_cyprinus", "PRJNA690234_CONTIG_8", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA690234", 8, 4727, 944.341427, 44639.01925, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 7978.0, 0.0, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA690234_P_NODE_8_length_4727_cov_944.341427_g4_i1", null, "Spring viraemia of carp virus isolate A1, complete genome", "gi|89280756|gb|DQ097384.2|", 696863, "g4", "i1", 97.922, 42.32896129, 4620, 72, 100.0, 6, 122, 4727, 159, 4768, 200089, 7978.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|89280756|gb|DQ097384.2|", "Viruses", "Viruses", "Viruses", "Viruses", 7978.0, 1019.0, 0.0, 0.0], [1482, "PRJNA690234_CONTIG_22415|Sprivivirus_cyprinus|CLUSTER1_Sprivivirus_cyprinus|1869|13", "Spring viraemia of carp virus", "Known", "PRJNA690234_CONTIG_22415|Sprivivirus_cyprinus", "PRJNA690234_CONTIG_22415", "Sprivivirus cyprinus", 1839, 13, 4, "CLUSTER1_Sprivivirus_cyprinus|1869|13", "OP495631_1_Sprivivirus_cyprinus_isolate_SVCV_2022_complete_genome", 1869, 13, "PRJNA690234", 22415, 268, 1.34359, 3.6008212, "Sprivivirus cyprinus", 696863, "Viruses", "Viruses", 368.0, 2.15e-97, "Sprivivirus cyprinus", "Non-phage", "NTclustered", "PRJNA690234_P_NODE_22415_length_268_cov_1.343590_g22048_i0", null, "Sprivivirus cyprinus strain 202238 nucleoprotein (NP), phosoprotein (P), matrix protein (M), glycoprotein (G), and polymerase protein (L) genes, complete cds", "gi|1063892400|gb|KU230365.1|", 696863, "g22048", "i0", 91.418, 18.0, 268, 23, 100.0, 0, 1, 268, 10614, 10347, 4824, 368.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Negarnaviricota", "Monjiviricetes", "Mononegavirales", "Rhabdoviridae", "Sprivivirus", "Sprivivirus cyprinus", "Viruses;Riboviria;Orthornavirae;Negarnaviricota;Monjiviricetes;Mononegavirales;Rhabdoviridae;Sprivivirus;Spring viraemia of carp virus", "Sprivivirus cyprinus", "Sprivivirus cyprinus", "gi|1063892400|gb|KU230365.1|", "Viruses", "Viruses", "Viruses", "Viruses", 368.0, 145.0, 2.15e-97, 3.96e-38]], "truncated": false, "filtered_table_rows_count": 4, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"Category\" = :p0 and \"bioproject\" = :p1 and \"clusterLCA_curated\" = :p2 order by rowid limit 101", "params": {"p0": "Known", "p1": "PRJNA690234", "p2": "Spring viraemia of carp virus"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Known", "label": "Known", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus", "selected": true}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Spring viraemia of carp virus", "label": "Spring viraemia of carp virus", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234", "selected": true}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Rhabdoviridae", "label": "Rhabdoviridae", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus&tax_family_NTorNR=Rhabdoviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Sprivivirus", "label": "Sprivivirus", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus&tax_genus_NTorNR=Sprivivirus", "selected": false}], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "Sprivivirus cyprinus", "label": "Sprivivirus cyprinus", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus&tax_species_NTorNR=Sprivivirus+cyprinus", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA690234&clusterLCA_curated=Spring+viraemia+of+carp+virus", "results": [{"value": "PRJNA690234", "label": "PRJNA690234", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&clusterLCA_curated=Spring+viraemia+of+carp+virus", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 48.36824900121428}