{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where Category = \"Known\", bioproject = \"PRJNA494251\" and tax_species_NTorNR = \"Cyprivirus A\"", "rows": [[3446, "PRJNA494251_CONTIG_1085|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA494251_CONTIG_1085|Cyprivirus_A", "PRJNA494251_CONTIG_1085", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA494251", 1085, 1102, 3.168124, 34.91272648, "Cyprivirus A", 2304617, "Viruses", "Viruses", 1916.0, 0.0, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA494251_P_NODE_1085_length_1102_cov_3.168124_g911_i0", null, "Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome", "gi|2500378199|ref|NC_076245.1|", 2563826, "g911", "i0", 98.091, 2.999092559, 1100, 21, 99.0, 0, 1, 1100, 6661, 5562, 3305, 1916.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|2500378199|ref|NC_076245.1|", "Viruses", "Viruses", "Viruses", "Viruses", 1916.0, 722.0, 0.0, 1.03e-238], [3736, "PRJNA494251_CONTIG_4698|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA494251_CONTIG_4698|Cyprivirus_A", "PRJNA494251_CONTIG_4698", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA494251", 4698, 586, 1.54386, 9.0470196, "Cyprivirus A", 2304617, "Viruses", "Viruses", 1005.0, 0.0, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA494251_P_NODE_4698_length_586_cov_1.543860_g4404_i0", null, "TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome", "gi|1990739381|tpg|BK011179.1|", 2563826, "g4404", "i0", 97.611, 3.0, 586, 14, 100.0, 0, 1, 586, 4427, 3842, 1758, 1005.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|1990739381|tpg|BK011179.1|", "Viruses", "Viruses", "Viruses", "Viruses", 1005.0, 392.0, 0.0, 2.33e-122], [3745, "PRJNA494251_CONTIG_4835|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA494251_CONTIG_4835|Cyprivirus_A", "PRJNA494251_CONTIG_4835", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA494251", 4835, 578, 1.241584, 7.17635552, "Cyprivirus 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220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA494251", 5779, 535, 2.088745, 11.17478575, "Cyprivirus A", 2304617, "Viruses", "Viruses", 911.0, 0.0, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA494251_P_NODE_5779_length_535_cov_2.088745_g5481_i0", null, "TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome", "gi|1990739381|tpg|BK011179.1|", 2563826, "g5481", "i0", 97.383, 3.0, 535, 14, 100.0, 0, 1, 535, 7944, 7410, 1605, 911.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|1990739381|tpg|BK011179.1|", "Viruses", "Viruses", "Viruses", "Viruses", 911.0, 352.0, 0.0, 7.920000000000001e-109], 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"Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|1812398529|gb|MN524064.1|", "Viruses", "Viruses", "Viruses", "Viruses", 599.0, 228.0, 9.81e-167, 1.18e-66], [4125, "PRJNA494251_CONTIG_19129|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA494251_CONTIG_19129|Cyprivirus_A", "PRJNA494251_CONTIG_19129", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA494251", 19129, 323, 1.804, 5.82692, "Cyprivirus A", 2304617, "Viruses", "Viruses", 558.0, 1.47e-154, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA494251_P_NODE_19129_length_323_cov_1.804000_g18815_i0", null, "Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome", "gi|2500378199|ref|NC_076245.1|", 2563826, "g18815", "i0", 97.833, 3.0, 323, 7, 100.0, 0, 1, 323, 6939, 7261, 969, 558.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|2500378199|ref|NC_076245.1|", "Viruses", "Viruses", "Viruses", "Viruses", 558.0, 233.0, 1.47e-154, 2.2599999999999997e-68], [4197, "PRJNA494251_CONTIG_29178|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA494251_CONTIG_29178|Cyprivirus_A", "PRJNA494251_CONTIG_29178", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA494251", 29178, 275, 1.188119, 3.26732725, "Cyprivirus A", 2304617, "Viruses", "Viruses", 470.0, 5.89e-128, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA494251_P_NODE_29178_length_275_cov_1.188119_g28864_i0", null, "Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome", "gi|1812398529|gb|MN524064.1|", 2563826, "g28864", "i0", 97.455, 3.0, 275, 7, 100.0, 0, 1, 275, 4791, 5065, 825, 470.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|1812398529|gb|MN524064.1|", "Viruses", "Viruses", "Viruses", "Viruses", 470.0, 178.0, 5.89e-128, 1.14e-49], [4255, "PRJNA494251_CONTIG_44026|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA494251_CONTIG_44026|Cyprivirus_A", "PRJNA494251_CONTIG_44026", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA494251", 44026, 245, 1.209302, 2.9627899, "Cyprivirus A", 2304617, "Viruses", "Viruses", 392.0, 1.15e-104, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA494251_P_NODE_44026_length_245_cov_1.209302_g43712_i0", null, "Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome", "gi|2500378199|ref|NC_076245.1|", 2563826, "g43712", "i0", 95.51, 3.0, 245, 11, 100.0, 0, 1, 245, 1434, 1678, 735, 392.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", "Zebrafish picornavirus 1", "gi|2500378199|ref|NC_076245.1|", "Viruses", "Viruses", "Viruses", "Viruses", 392.0, 166.0, 1.15e-104, 1.54e-45], [4275, "PRJNA494251_CONTIG_50766|Cyprivirus_A|CLUSTER1_Cyprivirus_A|1164|220", "Zebrafish picornavirus 1", "Known", "PRJNA494251_CONTIG_50766|Cyprivirus_A", "PRJNA494251_CONTIG_50766", "Cyprivirus A", 1161, 220, 1, "CLUSTER1_Cyprivirus_A|1164|220", "PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0|Cyprivirus_A|NTclustered|0|NA", 1164, 220, "PRJNA494251", 50766, 235, 3.91358, 9.196913, "Cyprivirus A", 2304617, "Viruses", "Viruses", 418.0, 1.8e-112, "Cyprivirus A", "Non-phage", "NTclustered", "PRJNA494251_P_NODE_50766_length_235_cov_3.913580_g50452_i0", null, "Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome", "gi|2500378199|ref|NC_076245.1|", 2563826, "g50452", "i0", 98.723, 4.09787234, 235, 3, 100.0, 0, 1, 235, 8135, 7901, 963, 418.0, 1.0, "Viruses", "Riboviria", "Orthornavirae", "Pisuviricota", "Pisoniviricetes", "Picornavirales", "Picornaviridae", null, "Cyprivirus A", "Viruses;Riboviria;Orthornavirae;Pisuviricota;Pisoniviricetes;Picornavirales;Picornaviridae;Zebrafish picornavirus 1", "Cyprivirus A", null, "gi|2500378199|ref|NC_076245.1|", "Viruses", null, "Viruses", null, 418.0, null, 1.8e-112, null]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"Category\" = :p0 and \"bioproject\" = :p1 and \"tax_species_NTorNR\" = :p2 order by rowid limit 101", "params": {"p0": "Known", "p1": "PRJNA494251", "p2": "Cyprivirus A"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA494251&tax_species_NTorNR=Cyprivirus+A", "results": [{"value": "Known", "label": "Known", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA494251&tax_species_NTorNR=Cyprivirus+A", "selected": true}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA494251&tax_species_NTorNR=Cyprivirus+A", "results": [{"value": "Zebrafish picornavirus 1", "label": "Zebrafish picornavirus 1", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA494251&tax_species_NTorNR=Cyprivirus+A&clusterLCA_curated=Zebrafish+picornavirus+1", "selected": false}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA494251&tax_species_NTorNR=Cyprivirus+A", "results": [{"value": "Picornaviridae", "label": "Picornaviridae", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA494251&tax_species_NTorNR=Cyprivirus+A&tax_family_NTorNR=Picornaviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA494251&tax_species_NTorNR=Cyprivirus+A", "results": [], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA494251&tax_species_NTorNR=Cyprivirus+A", "results": [{"value": "Cyprivirus A", "label": "Cyprivirus A", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA494251", "selected": true}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Known&bioproject=PRJNA494251&tax_species_NTorNR=Cyprivirus+A", "results": [{"value": "PRJNA494251", "label": "PRJNA494251", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Known&tax_species_NTorNR=Cyprivirus+A", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 54.26847800026735}