{"database": "metadata", "table": "viruses_fish_associated_curated", "is_view": false, "human_description_en": "where Category = \"Endogenous or not fish-associated\", bioproject = \"PRJNA1237347\" and clusterLCA_curated = \"Pimephales minnow adintovirus\"", "rows": [[9852, "PRJNA1237347_CONTIG_497924|Pimephales_minnow_adintovirus|CLUSTER3_Pimephales_minnow_adintovirus|19|15", "Pimephales minnow adintovirus", "Endogenous or not fish-associated", "PRJNA1237347_CONTIG_497924|Pimephales_minnow_adintovirus", "PRJNA1237347_CONTIG_497924", "Pimephales minnow adintovirus", 168, 104, 20, "CLUSTER3_Pimephales_minnow_adintovirus|19|15", "PRJEB66218_P_NODE_46828_length_500_cov_1.141230_g44412_i0|Pimephales_minnow_adintovirus|NR|1e-20|NA", 19, 15, "PRJNA1237347", 497924, 248, 0.88, 2.1824, "Pimephales minnow adintovirus", 2609864, "Viruses", "Viruses", 60.5, 1.12e-08, "Pimephales minnow adintovirus", "Non-phage", "NR", "PRJNA1237347_P_NODE_497924_length_248_cov_0.880000_g491351_i0", null, "DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus]", "DAC81394.1", 2609864, "g491351", "i0", 55.1, 0.592741935, 49, 22, 59.3, 0, 97, 243, 14, 62, 147, 60.5, 1.0, "Viruses", "Varidnaviria", "Bamfordvirae", "Preplasmiviricota", "Polintoviricetes", "Orthopolintovirales", "Adintoviridae", null, "Pimephales minnow adintovirus", "Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Pimephales minnow adintovirus", null, "Pimephales minnow adintovirus", null, null, "Viruses", null, "Viruses", null, 60.5, null, 1.12e-08], [9853, "PRJNA1237347_CONTIG_501046|Pimephales_minnow_adintovirus|CLUSTER3_Pimephales_minnow_adintovirus|19|15", "Pimephales minnow adintovirus", "Endogenous or not fish-associated", "PRJNA1237347_CONTIG_501046|Pimephales_minnow_adintovirus", "PRJNA1237347_CONTIG_501046", "Pimephales minnow adintovirus", 168, 104, 20, "CLUSTER3_Pimephales_minnow_adintovirus|19|15", "PRJEB66218_P_NODE_46828_length_500_cov_1.141230_g44412_i0|Pimephales_minnow_adintovirus|NR|1e-20|NA", 19, 15, "PRJNA1237347", 501046, 247, 2.402299, 5.93367853, "Pimephales minnow adintovirus", 2609864, "Viruses", "Viruses", 94.4, 1.4e-21, "Pimephales minnow adintovirus", "Non-phage", "NR", "PRJNA1237347_P_NODE_501046_length_247_cov_2.402299_g494473_i0", null, "DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus]", "DAC81394.1", 2609864, "g494473", "i0", 53.1, 0.983805668, 81, 38, 98.4, 0, 2, 244, 33, 113, 243, 94.4, 1.0, "Viruses", "Varidnaviria", "Bamfordvirae", "Preplasmiviricota", "Polintoviricetes", "Orthopolintovirales", "Adintoviridae", null, "Pimephales minnow adintovirus", "Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Pimephales minnow adintovirus", null, "Pimephales minnow adintovirus", null, null, "Viruses", null, "Viruses", null, 94.4, null, 1.4e-21], [9854, "PRJNA1237347_CONTIG_562468|Adintovirus_pavo15764|CLUSTER3_Pimephales_minnow_adintovirus|19|15", "Pimephales minnow adintovirus", "Endogenous or not fish-associated", "PRJNA1237347_CONTIG_562468|Adintovirus_pavo15764", "PRJNA1237347_CONTIG_562468", "Pimephales minnow adintovirus", 168, 104, 20, "CLUSTER3_Pimephales_minnow_adintovirus|19|15", "PRJEB66218_P_NODE_46828_length_500_cov_1.141230_g44412_i0|Pimephales_minnow_adintovirus|NR|1e-20|NA", 19, 15, "PRJNA1237347", 562468, 233, 2.6625, 6.203625, "Adintovirus pavo15764", 3115938, "Viruses", "Viruses", 72.8, 1.84e-13, "Adintovirus pavo15764", "Non-phage", "NR", "PRJNA1237347_P_NODE_562468_length_233_cov_2.662500_g555894_i0", null, "DBA50340.1 MAG TPA_asm: PacK [Adintovirus pavo15764]", "DBA50340.1", 3115938, "g555894", "i0", 47.3, 1.944206009, 74, 39, 95.3, 0, 10, 231, 82, 155, 453, 72.8, 1.0, "Viruses", "Varidnaviria", "Bamfordvirae", "Preplasmiviricota", "Polintoviricetes", "Orthopolintovirales", "Adintoviridae", null, "Adintovirus pavo15764", "Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Pimephales minnow adintovirus", null, "Adintovirus pavo15764", null, null, "Viruses", null, "Viruses", null, 72.8, null, 1.84e-13], [10091, "PRJNA1237347_CONTIG_556932|Pimephales_minnow_adintovirus|CLUSTER6_Pimephales_minnow_adintovirus|10|9", "Pimephales minnow adintovirus", "Endogenous or not fish-associated", "PRJNA1237347_CONTIG_556932|Pimephales_minnow_adintovirus", "PRJNA1237347_CONTIG_556932", "Pimephales minnow adintovirus", 168, 104, 20, "CLUSTER6_Pimephales_minnow_adintovirus|10|9", "PRJEB66218_P_NODE_83127_length_345_cov_0.922535_g80700_i0|Pimephales_minnow_adintovirus|NR|3.45e-17|NA", 10, 9, "PRJNA1237347", 556932, 241, 0.916667, 2.20916747, "Pimephales minnow adintovirus", 2609864, "Viruses", "Viruses", 72.0, 3.88e-14, "Pimephales minnow adintovirus", "Non-phage", "NR", "PRJNA1237347_P_NODE_556932_length_241_cov_0.916667_g550359_i0", null, "DAC81395.1 TPA_asm: gasderminX [Pimephales minnow adintovirus]", "DAC81395.1", 2609864, "g550359", "i0", 66.1, 1.692946058, 59, 20, 73.4, 0, 64, 240, 1, 59, 408, 72.0, 1.0, "Viruses", "Varidnaviria", "Bamfordvirae", "Preplasmiviricota", "Polintoviricetes", "Orthopolintovirales", "Adintoviridae", null, "Pimephales minnow adintovirus", "Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Pimephales minnow adintovirus", null, "Pimephales minnow adintovirus", null, null, "Viruses", null, "Viruses", null, 72.0, null, 3.88e-14], [10176, "PRJNA1237347_CONTIG_306011|Adintovirus_bos4377|CLUSTER7_Pimephales_minnow_adintovirus|5|5", "Pimephales minnow adintovirus", "Endogenous or not fish-associated", "PRJNA1237347_CONTIG_306011|Adintovirus_bos4377", "PRJNA1237347_CONTIG_306011", "Pimephales minnow adintovirus", 168, 104, 20, "CLUSTER7_Pimephales_minnow_adintovirus|5|5", "PRJEB673_P_NODE_3515_length_532_cov_2.076459_g3194_i0|Pimephales_minnow_adintovirus|NR|1.09e-50|NA", 4, 4, "PRJNA1237347", 306011, 330, 1.198444, 3.9548652, "Adintovirus bos4377", 3115894, "Viruses", "Viruses", 127.0, 1.2800000000000002e-32, "Adintovirus bos4377", "Non-phage", "NR", "PRJNA1237347_P_NODE_306011_length_330_cov_1.198444_g299438_i0", null, "DBA50491.1 MAG TPA_asm: Integrase [Adintovirus bos4377]", "DBA50491.1", 3115894, "g299438", "i0", 63.6, 4.0, 110, 40, 100.0, 0, 330, 1, 46, 155, 1320, 128.0, 0.9921875, "Viruses", "Varidnaviria", "Bamfordvirae", "Preplasmiviricota", "Polintoviricetes", "Orthopolintovirales", "Adintoviridae", null, "Adintovirus bos4377", "Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Pimephales minnow adintovirus", null, "Adintovirus bos4377", null, null, "Viruses", null, "Viruses", null, 127.0, null, 1.2800000000000002e-32], [10276, "PRJNA1237347_CONTIG_304902|Pimephales_minnow_adintovirus|CLUSTER12_Pimephales_minnow_adintovirus|2|2", "Pimephales minnow adintovirus", "Endogenous or not fish-associated", "PRJNA1237347_CONTIG_304902|Pimephales_minnow_adintovirus", "PRJNA1237347_CONTIG_304902", "Pimephales minnow adintovirus", 168, 104, 20, "CLUSTER12_Pimephales_minnow_adintovirus|2|2", "PRJNA1237347_P_NODE_304902_length_331_cov_0.767442_g298329_i0|Pimephales_minnow_adintovirus|NR|6.08e-20|NA", 2, 2, "PRJNA1237347", 304902, 331, 0.767442, 2.54023302, "Pimephales minnow adintovirus", 2609864, "Viruses", "Viruses", 94.7, 6.08e-20, "Pimephales minnow adintovirus", "Non-phage", "NR", "PRJNA1237347_P_NODE_304902_length_331_cov_0.767442_g298329_i0", null, "DAC81392.1 TPA_asm: PolB-N [Pimephales minnow adintovirus]", "DAC81392.1", 2609864, "g298329", "i0", 51.4, 2.936555891, 107, 52, 97.0, 0, 10, 330, 226, 332, 972, 94.7, 1.0, "Viruses", "Varidnaviria", "Bamfordvirae", "Preplasmiviricota", "Polintoviricetes", "Orthopolintovirales", "Adintoviridae", null, "Pimephales minnow adintovirus", "Viruses;Varidnaviria;Bamfordvirae;Preplasmiviricota;Polintoviricetes;Orthopolintovirales;Adintoviridae;Pimephales minnow adintovirus", null, "Pimephales minnow adintovirus", null, null, "Viruses", null, "Viruses", null, 94.7, null, 6.08e-20]], "truncated": false, "filtered_table_rows_count": 6, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "contig_withLCA_withcluster", "clusterLCA_curated", "Category", "contig_withLCA", "shortcontigname", "clusterLCA", "clusterLCAcurated_contigcount", "clusterLCAcurated_bioprojectcount", "clusterLCAcurated_clustercount", "shortclustername", "cluster", "clustersize", "bioprojectsbycluster", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca_NTorNR", "taxid_lca_NTorNR", "taxoncategory_NTorNR", "taxoncategorysimple_NTorNR", "bits_NTorNR", "evalue_NTorNR", "viruscategory_NTorNR", "viruscategorysimple_NTorNR", "analysis_used", "contig_name", "lowcoverage_flag", "target_title_NTorNR", "target_NTorNR", "taxid_NTorNR", "gene_NTorNR", "allele_NTorNR", "pident_NTorNR", "sumperc_cov_NTorNR", "alnlen_NTorNR", "mismatch_NTorNR", "qcov_NTorNR", "gapopen_NTorNR", "qstart_NTorNR", "qend_NTorNR", "tstart_NTorNR", "tend_NTorNR", "sumalnlen_NTorNR", "maxbits_NTorNR", "bits_percmax_NTorNR", "tax_superkingdom_NTorNR", "tax_clade_NTorNR", "tax_kingdom_NTorNR", "tax_phylum_NTorNR", "tax_class_NTorNR", "tax_order_NTorNR", "tax_family_NTorNR", "tax_genus_NTorNR", "tax_species_NTorNR", "classification", "taxname_lca_NTclustered", "taxname_lca_NR", "target_NTclustered", "taxoncategory_NTclustered", "taxoncategory_NR", "taxoncategorysimple_NTclustered", "taxoncategorysimple_NR", "bits_NTclustered", "bits_NR", "evalue_NTclustered", "evalue_NR"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, contig_withLCA_withcluster, clusterLCA_curated, Category, contig_withLCA, shortcontigname, clusterLCA, clusterLCAcurated_contigcount, clusterLCAcurated_bioprojectcount, clusterLCAcurated_clustercount, shortclustername, cluster, clustersize, bioprojectsbycluster, bioproject, node, length, coverage, rel_abundance, taxname_lca_NTorNR, taxid_lca_NTorNR, taxoncategory_NTorNR, taxoncategorysimple_NTorNR, bits_NTorNR, evalue_NTorNR, viruscategory_NTorNR, viruscategorysimple_NTorNR, analysis_used, contig_name, lowcoverage_flag, target_title_NTorNR, target_NTorNR, taxid_NTorNR, gene_NTorNR, allele_NTorNR, pident_NTorNR, sumperc_cov_NTorNR, alnlen_NTorNR, mismatch_NTorNR, qcov_NTorNR, gapopen_NTorNR, qstart_NTorNR, qend_NTorNR, tstart_NTorNR, tend_NTorNR, sumalnlen_NTorNR, maxbits_NTorNR, bits_percmax_NTorNR, tax_superkingdom_NTorNR, tax_clade_NTorNR, tax_kingdom_NTorNR, tax_phylum_NTorNR, tax_class_NTorNR, tax_order_NTorNR, tax_family_NTorNR, tax_genus_NTorNR, tax_species_NTorNR, classification, taxname_lca_NTclustered, taxname_lca_NR, target_NTclustered, taxoncategory_NTclustered, taxoncategory_NR, taxoncategorysimple_NTclustered, taxoncategorysimple_NR, bits_NTclustered, bits_NR, evalue_NTclustered, evalue_NR from viruses_fish_associated_curated where \"Category\" = :p0 and \"bioproject\" = :p1 and \"clusterLCA_curated\" = :p2 order by rowid limit 101", "params": {"p0": "Endogenous or not fish-associated", "p1": "PRJNA1237347", "p2": "Pimephales minnow adintovirus"}}, "facet_results": {"Category": {"name": "Category", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus", "results": [{"value": "Endogenous or not fish-associated", "label": "Endogenous or not fish-associated", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus", "selected": true}], "truncated": false}, "clusterLCA_curated": {"name": "clusterLCA_curated", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus", "results": [{"value": "Pimephales minnow adintovirus", "label": "Pimephales minnow adintovirus", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347", "selected": true}], "truncated": false}, "tax_family_NTorNR": {"name": "tax_family_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus", "results": [{"value": "Adintoviridae", "label": "Adintoviridae", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus&tax_family_NTorNR=Adintoviridae", "selected": false}], "truncated": false}, "tax_genus_NTorNR": {"name": "tax_genus_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus", "results": [], "truncated": false}, "tax_species_NTorNR": {"name": "tax_species_NTorNR", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus", "results": [{"value": "Pimephales minnow adintovirus", "label": "Pimephales minnow adintovirus", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus&tax_species_NTorNR=Pimephales+minnow+adintovirus", "selected": false}, {"value": "Adintovirus bos4377", "label": "Adintovirus bos4377", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus&tax_species_NTorNR=Adintovirus+bos4377", "selected": false}, {"value": "Adintovirus pavo15764", "label": "Adintovirus pavo15764", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus&tax_species_NTorNR=Adintovirus+pavo15764", "selected": false}], "truncated": false}, "bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&bioproject=PRJNA1237347&clusterLCA_curated=Pimephales+minnow+adintovirus", "results": [{"value": "PRJNA1237347", "label": "PRJNA1237347", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/viruses_fish_associated_curated.json?Category=Endogenous+or+not+fish-associated&clusterLCA_curated=Pimephales+minnow+adintovirus", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 41.88202899968019}