metadata: run_metadata: 35,927 rows where experiment.library_selection = "cDNA", experiment.library_strategy = "RNA-Seq" and technology = "unknown"

35,927 rows where experiment.library_selection = "cDNA", experiment.library_strategy = "RNA-Seq" and technology = "unknown"

descending

Link	rowid ▼	run.accession	experiment.accession	sample.accession	study.accession	bioproject	study.title	study.alias	study.type	study.abstract	study.PMIDs	sample.description	sample.title	sample.alias	sample.attributes	experiment.title	experiment.alias	experiment.library_name	experiment.design_description	experiment.library_construction_protocol	experiment.library_strategy	experiment.library_source	experiment.library_selection	experiment.library_layout	experiment.platform	experiment.instrument_model	experiment.spot_descriptor	experiment.study_ref	run.title	run.total_bases	run.total_spots	run.alias	run.read_lengths	run.base_counts	run.r1_length	run.r2_length	run.Acount	run.Ccount	run.Gcount	run.Tcount	run.Ncount	run.experiment	run.pool_member	submission.accession	submission.srasource	submission.bioprojectsource	seqdetective.n_mates	seqdetective.mapping_rate.mate1	seqdetective.mapping_rate.mate2	seqdetective.nofeature_rate.mate1	seqdetective.nofeature_rate.mate2	seqdetective.sparsity.mate1	seqdetective.sparsity.mate2	seqdetective.pos_strand_rate.mate1	seqdetective.pos_strand_rate.mate2	seqdetective.readlen.mate1	seqdetective.readlen.mate2	seqdetective.judgement.mate1	seqdetective.judgement.mate2	seqdetective.judgement.reason	platform_family	instrument_generation	read_bias	selection_class	prep_kit	sc_or_bulk	tech_class	technology	submission.bioprojectsource.country	earliest_date	devstage_curation	devstage_curation_coarse	tissue_curation	tissue_curation_coarse
14	14	DRR334977	DRX323973	DRS217313	DRP008001	PRJDB12578	Allometric scaling of RNA abundance from genes to communities	DRP008001	Other	The metabolic theory of ecology MTE and growth rate hypothesis GRH help explain the mechanistic basis of size allometry and temperature dependence on growth rate and whole body RNA content in organisms. However testing RNA allometric scaling with next generation sequencing is yet to be done. Here we validated the assumptions of GRH and MTE on messenger RNA and ribosome abundance using mock community metatranscriptome analysis. Our findings highlight that fast growing smaller species harbor greater RNA abundance per mass of tissue compared with species having larger body sizes and slower growth rates. We found that genome size and body size impose significant constraints in interspecific RNA abundance scaling while the assumed temperature dependence appeared to be weak. Lastly allometric scaling integration in community level models may extend the use of metatranscriptomics as a reliable tool for estimating ecosystem processes.		totalRNA metatranscriptomic sequences from mock communities consist of five model species	rRNA mock community at 28 degrees rep 3	SAMD00422597	sample name:rRNA mock community 28 degrees rep 3\|biological replicate:3\|collection date:2021 01 15\|dev stage:Adult\|technical replicate:3\|temp:28\|treatment:rRNA	NextSeq 2000 sequencing of SAMD00422597	DRX323973	t28 3 tRNA.fastq	1	NEBNext Kit for Illumina	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	NextSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>101</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP008001	NextSeq 2000 sequencing of SAMD00422597	3791170746.0	37701921.0	DRR334977	0:100.56 1:0	A:967477491;C:926887571;G:898697642;T:998107868;N:174	100	0	967477491	926887571	898697642	998107868	174	DRX323973	DRS217313	DRA013226	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	1	0.31527		0.06446		0.88844		0.62118		101		B		usable mapping rate	illumina	nextseq_v2	unknown	random_priming	nebnext	bulk	unknown	unknown	Taiwan	2021-12-23	Adult	Adult	Undetermined	Undetermined
15	15	DRR334976	DRX323972	DRS217312	DRP008001	PRJDB12578	Allometric scaling of RNA abundance from genes to communities	DRP008001	Other	The metabolic theory of ecology MTE and growth rate hypothesis GRH help explain the mechanistic basis of size allometry and temperature dependence on growth rate and whole body RNA content in organisms. However testing RNA allometric scaling with next generation sequencing is yet to be done. Here we validated the assumptions of GRH and MTE on messenger RNA and ribosome abundance using mock community metatranscriptome analysis. Our findings highlight that fast growing smaller species harbor greater RNA abundance per mass of tissue compared with species having larger body sizes and slower growth rates. We found that genome size and body size impose significant constraints in interspecific RNA abundance scaling while the assumed temperature dependence appeared to be weak. Lastly allometric scaling integration in community level models may extend the use of metatranscriptomics as a reliable tool for estimating ecosystem processes.		totalRNA metatranscriptomic sequences from mock communities consist of five model species	rRNA mock community at 28 degrees rep 2	SAMD00422596	sample name:rRNA mock community 28 degrees rep 2\|biological replicate:3\|collection date:2021 01 15\|dev stage:Adult\|technical replicate:2\|temp:28\|treatment:rRNA	NextSeq 2000 sequencing of SAMD00422596	DRX323972	t28 2 tRNA.fastq	1	NEBNext Kit for Illumina	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	NextSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>101</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP008001	NextSeq 2000 sequencing of SAMD00422596	2801693695.0	27860658.0	DRR334976	0:100.56 1:0	A:700189496;C:702936549;G:679920984;T:718646067;N:599	100	0	700189496	702936549	679920984	718646067	599	DRX323972	DRS217312	DRA013226	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	1	0.43508		0.08819		0.85859		0.69447		101		B		usable mapping rate	illumina	nextseq_v2	unknown	random_priming	nebnext	bulk	unknown	unknown	Taiwan	2021-12-23	Adult	Adult	Undetermined	Undetermined
16	16	DRR334975	DRX323971	DRS217311	DRP008001	PRJDB12578	Allometric scaling of RNA abundance from genes to communities	DRP008001	Other	The metabolic theory of ecology MTE and growth rate hypothesis GRH help explain the mechanistic basis of size allometry and temperature dependence on growth rate and whole body RNA content in organisms. However testing RNA allometric scaling with next generation sequencing is yet to be done. Here we validated the assumptions of GRH and MTE on messenger RNA and ribosome abundance using mock community metatranscriptome analysis. Our findings highlight that fast growing smaller species harbor greater RNA abundance per mass of tissue compared with species having larger body sizes and slower growth rates. We found that genome size and body size impose significant constraints in interspecific RNA abundance scaling while the assumed temperature dependence appeared to be weak. Lastly allometric scaling integration in community level models may extend the use of metatranscriptomics as a reliable tool for estimating ecosystem processes.		totalRNA metatranscriptomic sequences from mock communities consist of five model species	rRNA mock community at 28 degrees rep 1	SAMD00422595	sample name:rRNA mock community 28 degrees rep 1\|biological replicate:3\|collection date:2021 01 15\|dev stage:Adult\|technical replicate:1\|temp:28\|treatment:rRNA	NextSeq 2000 sequencing of SAMD00422595	DRX323971	t28 1 tRNA.fastq	1	NEBNext Kit for Illumina	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	NextSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>101</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP008001	NextSeq 2000 sequencing of SAMD00422595	3148691934.0	31307464.0	DRR334975	0:100.57 1:0	A:785000734;C:791315678;G:766594599;T:805780465;N:458	100	0	785000734	791315678	766594599	805780465	458	DRX323971	DRS217311	DRA013226	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	1	0.37139		0.09061		0.94065		0.74047		101		B		usable mapping rate	illumina	nextseq_v2	unknown	random_priming	nebnext	bulk	unknown	unknown	Taiwan	2021-12-23	Adult	Adult	Undetermined	Undetermined
17	17	DRR334974	DRX323970	DRS217310	DRP008001	PRJDB12578	Allometric scaling of RNA abundance from genes to communities	DRP008001	Other	The metabolic theory of ecology MTE and growth rate hypothesis GRH help explain the mechanistic basis of size allometry and temperature dependence on growth rate and whole body RNA content in organisms. However testing RNA allometric scaling with next generation sequencing is yet to be done. Here we validated the assumptions of GRH and MTE on messenger RNA and ribosome abundance using mock community metatranscriptome analysis. Our findings highlight that fast growing smaller species harbor greater RNA abundance per mass of tissue compared with species having larger body sizes and slower growth rates. We found that genome size and body size impose significant constraints in interspecific RNA abundance scaling while the assumed temperature dependence appeared to be weak. Lastly allometric scaling integration in community level models may extend the use of metatranscriptomics as a reliable tool for estimating ecosystem processes.		totalRNA metatranscriptomic sequences from mock communities consist of five model species	rRNA mock community at 19 degrees rep 3	SAMD00422594	sample name:rRNA mock community 19 degrees rep 3\|biological replicate:2\|collection date:2021 01 15\|dev stage:Adult\|technical replicate:3\|temp:19\|treatment:rRNA	NextSeq 2000 sequencing of SAMD00422594	DRX323970	t19 3 tRNA.fastq	1	NEBNext Kit for Illumina	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	NextSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>101</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP008001	NextSeq 2000 sequencing of SAMD00422594	2856186273.0	28400524.0	DRR334974	0:100.57 1:0	A:695685787;C:733754277;G:715270279;T:711475544;N:386	100	0	695685787	733754277	715270279	711475544	386	DRX323970	DRS217310	DRA013226	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	1	0.48152		0.10933		0.87105		0.7287		101		B		usable mapping rate	illumina	nextseq_v2	unknown	random_priming	nebnext	bulk	unknown	unknown	Taiwan	2021-12-23	Adult	Adult	Undetermined	Undetermined
18	18	DRR334973	DRX323969	DRS217309	DRP008001	PRJDB12578	Allometric scaling of RNA abundance from genes to communities	DRP008001	Other	The metabolic theory of ecology MTE and growth rate hypothesis GRH help explain the mechanistic basis of size allometry and temperature dependence on growth rate and whole body RNA content in organisms. However testing RNA allometric scaling with next generation sequencing is yet to be done. Here we validated the assumptions of GRH and MTE on messenger RNA and ribosome abundance using mock community metatranscriptome analysis. Our findings highlight that fast growing smaller species harbor greater RNA abundance per mass of tissue compared with species having larger body sizes and slower growth rates. We found that genome size and body size impose significant constraints in interspecific RNA abundance scaling while the assumed temperature dependence appeared to be weak. Lastly allometric scaling integration in community level models may extend the use of metatranscriptomics as a reliable tool for estimating ecosystem processes.		totalRNA metatranscriptomic sequences from mock communities consist of five model species	rRNA mock community at 19 degrees rep 2	SAMD00422593	sample name:rRNA mock community 19 degrees rep 2\|biological replicate:2\|collection date:2021 01 15\|dev stage:Adult\|technical replicate:2\|temp:19\|treatment:rRNA	NextSeq 2000 sequencing of SAMD00422593	DRX323969	t19 2 tRNA.fastq	1	NEBNext Kit for Illumina	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	NextSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>101</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP008001	NextSeq 2000 sequencing of SAMD00422593	3199929804.0	31816971.0	DRR334973	0:100.57 1:0	A:777149590;C:825478743;G:804835148;T:792466124;N:199	100	0	777149590	825478743	804835148	792466124	199	DRX323969	DRS217309	DRA013226	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	1	0.4418		0.10282		0.89706		0.74667		101		B		usable mapping rate	illumina	nextseq_v2	unknown	random_priming	nebnext	bulk	unknown	unknown	Taiwan	2021-12-23	Adult	Adult	Undetermined	Undetermined
19	19	DRR334972	DRX323968	DRS217308	DRP008001	PRJDB12578	Allometric scaling of RNA abundance from genes to communities	DRP008001	Other	The metabolic theory of ecology MTE and growth rate hypothesis GRH help explain the mechanistic basis of size allometry and temperature dependence on growth rate and whole body RNA content in organisms. However testing RNA allometric scaling with next generation sequencing is yet to be done. Here we validated the assumptions of GRH and MTE on messenger RNA and ribosome abundance using mock community metatranscriptome analysis. Our findings highlight that fast growing smaller species harbor greater RNA abundance per mass of tissue compared with species having larger body sizes and slower growth rates. We found that genome size and body size impose significant constraints in interspecific RNA abundance scaling while the assumed temperature dependence appeared to be weak. Lastly allometric scaling integration in community level models may extend the use of metatranscriptomics as a reliable tool for estimating ecosystem processes.		totalRNA metatranscriptomic sequences from mock communities consist of five model species	rRNA mock community at 19 degrees rep 1	SAMD00422592	sample name:rRNA mock community 19 degrees rep 1\|biological replicate:2\|collection date:2021 01 15\|dev stage:Adult\|technical replicate:1\|temp:19\|treatment:rRNA	NextSeq 2000 sequencing of SAMD00422592	DRX323968	t19 1 tRNA.fastq	1	NEBNext Kit for Illumina	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	NextSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>101</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP008001	NextSeq 2000 sequencing of SAMD00422592	3658675391.0	36374718.0	DRR334972	0:100.58 1:0	A:879342063;C:954687406;G:929537615;T:895107890;N:417	100	0	879342063	954687406	929537615	895107890	417	DRX323968	DRS217308	DRA013226	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	1	0.49439		0.11691		0.88239		0.73925		101		B		usable mapping rate	illumina	nextseq_v2	unknown	random_priming	nebnext	bulk	unknown	unknown	Taiwan	2021-12-23	Adult	Adult	Undetermined	Undetermined
20	20	DRR334971	DRX323967	DRS217307	DRP008001	PRJDB12578	Allometric scaling of RNA abundance from genes to communities	DRP008001	Other	The metabolic theory of ecology MTE and growth rate hypothesis GRH help explain the mechanistic basis of size allometry and temperature dependence on growth rate and whole body RNA content in organisms. However testing RNA allometric scaling with next generation sequencing is yet to be done. Here we validated the assumptions of GRH and MTE on messenger RNA and ribosome abundance using mock community metatranscriptome analysis. Our findings highlight that fast growing smaller species harbor greater RNA abundance per mass of tissue compared with species having larger body sizes and slower growth rates. We found that genome size and body size impose significant constraints in interspecific RNA abundance scaling while the assumed temperature dependence appeared to be weak. Lastly allometric scaling integration in community level models may extend the use of metatranscriptomics as a reliable tool for estimating ecosystem processes.		totalRNA metatranscriptomic sequences from mock communities consist of five model species	rRNA mock community at 10 degrees rep 3	SAMD00422591	sample name:rRNA mock community 10 degrees rep 3\|biological replicate:1\|collection date:2021 01 15\|dev stage:Adult\|technical replicate:3\|temp:10\|treatment:rRNA	NextSeq 2000 sequencing of SAMD00422591	DRX323967	t10 3 tRNA.fastq	1	NEBNext Kit for Illumina	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	NextSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>101</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP008001	NextSeq 2000 sequencing of SAMD00422591	3017524690.0	30006334.0	DRR334971	0:100.56 1:0	A:771967717;C:738814269;G:712866126;T:793876235;N:343	100	0	771967717	738814269	712866126	793876235	343	DRX323967	DRS217307	DRA013226	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	1	0.33157		0.07363		0.9093		0.73422		100		B		usable mapping rate	illumina	nextseq_v2	unknown	random_priming	nebnext	bulk	unknown	unknown	Taiwan	2021-12-23	Adult	Adult	Undetermined	Undetermined
21	21	DRR334970	DRX323966	DRS217306	DRP008001	PRJDB12578	Allometric scaling of RNA abundance from genes to communities	DRP008001	Other	The metabolic theory of ecology MTE and growth rate hypothesis GRH help explain the mechanistic basis of size allometry and temperature dependence on growth rate and whole body RNA content in organisms. However testing RNA allometric scaling with next generation sequencing is yet to be done. Here we validated the assumptions of GRH and MTE on messenger RNA and ribosome abundance using mock community metatranscriptome analysis. Our findings highlight that fast growing smaller species harbor greater RNA abundance per mass of tissue compared with species having larger body sizes and slower growth rates. We found that genome size and body size impose significant constraints in interspecific RNA abundance scaling while the assumed temperature dependence appeared to be weak. Lastly allometric scaling integration in community level models may extend the use of metatranscriptomics as a reliable tool for estimating ecosystem processes.		totalRNA metatranscriptomic sequences from mock communities consist of five model species	rRNA mock community at 10 degrees rep 2	SAMD00422590	sample name:rRNA mock community 10 degrees rep 2\|biological replicate:1\|collection date:2021 01 15\|dev stage:Adult\|technical replicate:2\|temp:10\|treatment:rRNA	NextSeq 2000 sequencing of SAMD00422590	DRX323966	t10 2 tRNA.fastq	1	NEBNext Kit for Illumina	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	NextSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>101</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP008001	NextSeq 2000 sequencing of SAMD00422590	3115915184.0	30982336.0	DRR334970	0:100.57 1:0	A:765727966;C:794741415;G:771082024;T:784363609;N:170	100	0	765727966	794741415	771082024	784363609	170	DRX323966	DRS217306	DRA013226	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	1	0.45458		0.10504		0.89357		0.749		100		B		usable mapping rate	illumina	nextseq_v2	unknown	random_priming	nebnext	bulk	unknown	unknown	Taiwan	2021-12-23	Adult	Adult	Undetermined	Undetermined
22	22	DRR334969	DRX323965	DRS217305	DRP008001	PRJDB12578	Allometric scaling of RNA abundance from genes to communities	DRP008001	Other	The metabolic theory of ecology MTE and growth rate hypothesis GRH help explain the mechanistic basis of size allometry and temperature dependence on growth rate and whole body RNA content in organisms. However testing RNA allometric scaling with next generation sequencing is yet to be done. Here we validated the assumptions of GRH and MTE on messenger RNA and ribosome abundance using mock community metatranscriptome analysis. Our findings highlight that fast growing smaller species harbor greater RNA abundance per mass of tissue compared with species having larger body sizes and slower growth rates. We found that genome size and body size impose significant constraints in interspecific RNA abundance scaling while the assumed temperature dependence appeared to be weak. Lastly allometric scaling integration in community level models may extend the use of metatranscriptomics as a reliable tool for estimating ecosystem processes.		totalRNA metatranscriptomic sequences from mock communities consist of five model species	rRNA mock community at 10 degrees rep 1	SAMD00422589	sample name:rRNA mock community 10 degrees rep 1\|biological replicate:1\|collection date:2021 01 15\|dev stage:Adult\|technical replicate:1\|temp:10\|treatment:rRNA	NextSeq 2000 sequencing of SAMD00422589	DRX323965	t10 1 tRNA.fastq	1	NEBNext Kit for Illumina	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	NextSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>101</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP008001	NextSeq 2000 sequencing of SAMD00422589	3206657309.0	31883532.0	DRR334969	0:100.57 1:0	A:792874386;C:814578518;G:787469614;T:811734581;N:210	100	0	792874386	814578518	787469614	811734581	210	DRX323965	DRS217305	DRA013226	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	SINICA\|Machida Laboratory Biodiversity Research Center, Academia Sinica	1	0.40156		0.09664		0.92898		0.74114		101		B		usable mapping rate	illumina	nextseq_v2	unknown	random_priming	nebnext	bulk	unknown	unknown	Taiwan	2021-12-23	Adult	Adult	Undetermined	Undetermined
44	44	DRR668250	DRX648352	DRS458865	DRP012880	PRJDB18466	Comparison of spinal cord regeneration capacity in zebrafish and medaka	PRJDB18466	Other	Unlike mammals zebrafish have the remarkable ability to regenerate many tissues including the spinal cord. Medaka another model fish species has a low regenerative ability in the spinal cord. Therefore comparisons with them advantageous to revealing regeneration specific mechanisms in the spinal cord. The comparison of the spinal cord regeneration abilities of zebrafish and medaka could be a promising research field to elucidate new factors that determine spinal cord regeneration ability.	pubmed:40278963	Zebrafish 2 weeks post spinal cord injury replicate 3	Zebrafish 2wpi 3	SAMD00799623	sample name:Zebrafish 2wpi 3\|biological replicate:3\|biomaterial provider:Center of Medical Innovation and Translational Research Osaka University\|collection date:2023 04 25\|dev stage:Adult\|geo loc name:Japan\|sex:not determined\|strain:AB Zebrafish\|tissue:Spinal cord	DNBSEQ G400 paired end sequencing of SAMD00799623	DRX648352	RNA seq of spinal cord in zebrafish at 2wpi injured 3	1	Total RNA was extracted using RNeasy Micro Kit Qiagen 74104 with DNase treatment RNase Free DNase Set Qiagen 79254. Libraries were constructed from the amplified total RNA.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	DNBSEQ	DNBSEQ-G400		DRP012880	DNBSEQ G400 paired end sequencing of SAMD00799623	14782516800.0	73912584.0	DRR668250	0:100 1:100	A:4058090278;C:3335994894;G:3323563782;T:4062467903;N:2399943	100	100	4058090278	3335994894	3323563782	4062467903	2399943	DRX648352	DRS458865	DRA020617	Osaka University	Osaka University												B	B	biological fallback assumption	bgi	bgi	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2025-05-12	Adult	Adult	Spinal Cord	Nervous System
45	45	DRR668249	DRX648351	DRS458864	DRP012880	PRJDB18466	Comparison of spinal cord regeneration capacity in zebrafish and medaka	PRJDB18466	Other	Unlike mammals zebrafish have the remarkable ability to regenerate many tissues including the spinal cord. Medaka another model fish species has a low regenerative ability in the spinal cord. Therefore comparisons with them advantageous to revealing regeneration specific mechanisms in the spinal cord. The comparison of the spinal cord regeneration abilities of zebrafish and medaka could be a promising research field to elucidate new factors that determine spinal cord regeneration ability.	pubmed:40278963	Zebrafish 2 weeks post spinal cord injury replicate 2	Zebrafish 2wpi 2	SAMD00799622	sample name:Zebrafish 2wpi 2\|biological replicate:2\|biomaterial provider:Center of Medical Innovation and Translational Research Osaka University\|collection date:2023 04 14\|dev stage:Adult\|geo loc name:Japan\|sex:not determined\|strain:AB Zebrafish\|tissue:Spinal cord	DNBSEQ G400 paired end sequencing of SAMD00799622	DRX648351	RNA seq of spinal cord in zebrafish at 2wpi injured 2	1	Total RNA was extracted using RNeasy Micro Kit Qiagen 74104 with DNase treatment RNase Free DNase Set Qiagen 79254. Libraries were constructed from the amplified total RNA.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	DNBSEQ	DNBSEQ-G400		DRP012880	DNBSEQ G400 paired end sequencing of SAMD00799622	13687641800.0	68438209.0	DRR668249	0:100 1:100	A:3759784620;C:3087398782;G:3083881581;T:3754378915;N:2197902	100	100	3759784620	3087398782	3083881581	3754378915	2197902	DRX648351	DRS458864	DRA020617	Osaka University	Osaka University												B	B	biological fallback assumption	bgi	bgi	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2025-05-12	Adult	Adult	Spinal Cord	Nervous System
46	46	DRR668248	DRX648350	DRS458863	DRP012880	PRJDB18466	Comparison of spinal cord regeneration capacity in zebrafish and medaka	PRJDB18466	Other	Unlike mammals zebrafish have the remarkable ability to regenerate many tissues including the spinal cord. Medaka another model fish species has a low regenerative ability in the spinal cord. Therefore comparisons with them advantageous to revealing regeneration specific mechanisms in the spinal cord. The comparison of the spinal cord regeneration abilities of zebrafish and medaka could be a promising research field to elucidate new factors that determine spinal cord regeneration ability.	pubmed:40278963	Zebrafish 2 weeks post spinal cord injury replicate 1	Zebrafish 2wpi 1	SAMD00799621	sample name:Zebrafish 2wpi 1\|biological replicate:1\|biomaterial provider:Center of Medical Innovation and Translational Research Osaka University\|collection date:2023 04 14\|dev stage:Adult\|geo loc name:Japan\|sex:not determined\|strain:AB Zebrafish\|tissue:Spinal cord	DNBSEQ G400 paired end sequencing of SAMD00799621	DRX648350	RNA seq of spinal cord in zebrafish at 2wpi injured 1	1	Total RNA was extracted using RNeasy Micro Kit Qiagen 74104 with DNase treatment RNase Free DNase Set Qiagen 79254. Libraries were constructed from the amplified total RNA.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	DNBSEQ	DNBSEQ-G400		DRP012880	DNBSEQ G400 paired end sequencing of SAMD00799621	16376197200.0	81880986.0	DRR668248	0:100 1:100	A:4485868844;C:3700974430;G:3710833937;T:4475827800;N:2692189	100	100	4485868844	3700974430	3710833937	4475827800	2692189	DRX648350	DRS458863	DRA020617	Osaka University	Osaka University												B	B	biological fallback assumption	bgi	bgi	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2025-05-12	Adult	Adult	Spinal Cord	Nervous System
47	47	DRR668247	DRX648349	DRS458862	DRP012880	PRJDB18466	Comparison of spinal cord regeneration capacity in zebrafish and medaka	PRJDB18466	Other	Unlike mammals zebrafish have the remarkable ability to regenerate many tissues including the spinal cord. Medaka another model fish species has a low regenerative ability in the spinal cord. Therefore comparisons with them advantageous to revealing regeneration specific mechanisms in the spinal cord. The comparison of the spinal cord regeneration abilities of zebrafish and medaka could be a promising research field to elucidate new factors that determine spinal cord regeneration ability.	pubmed:40278963	Zebrafish Intact biological replicate 3	Zebrafish Control 3	SAMD00799620	sample name:Zebrafish Control 3\|biological replicate:3\|biomaterial provider:Center of Medical Innovation and Translational Research Osaka University\|collection date:2023 04 21\|dev stage:Adult\|geo loc name:Japan\|sex:not determined\|strain:AB Zebrafish\|tissue:Spinal cord	DNBSEQ G400 paired end sequencing of SAMD00799620	DRX648349	RNA seq of spinal cord in zebrafish at 0wpi control 3	1	Total RNA was extracted using RNeasy Micro Kit Qiagen 74104 with DNase treatment RNase Free DNase Set Qiagen 79254. Libraries were constructed from the amplified total RNA.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	DNBSEQ	DNBSEQ-G400		DRP012880	DNBSEQ G400 paired end sequencing of SAMD00799620	13377538600.0	66887693.0	DRR668247	0:100 1:100	A:3725064764;C:2973653932;G:2980883214;T:3695767890;N:2168800	100	100	3725064764	2973653932	2980883214	3695767890	2168800	DRX648349	DRS458862	DRA020617	Osaka University	Osaka University												B	B	biological fallback assumption	bgi	bgi	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2025-05-12	Adult	Adult	Spinal Cord	Nervous System
48	48	DRR668246	DRX648348	DRS458861	DRP012880	PRJDB18466	Comparison of spinal cord regeneration capacity in zebrafish and medaka	PRJDB18466	Other	Unlike mammals zebrafish have the remarkable ability to regenerate many tissues including the spinal cord. Medaka another model fish species has a low regenerative ability in the spinal cord. Therefore comparisons with them advantageous to revealing regeneration specific mechanisms in the spinal cord. The comparison of the spinal cord regeneration abilities of zebrafish and medaka could be a promising research field to elucidate new factors that determine spinal cord regeneration ability.	pubmed:40278963	Zebrafish Intact biological replicate 2	Zebrafish Control 2	SAMD00799619	sample name:Zebrafish Control 2\|biological replicate:2\|biomaterial provider:Center of Medical Innovation and Translational Research Osaka University\|collection date:2023 04 21\|dev stage:Adult\|geo loc name:Japan\|sex:not determined\|strain:AB Zebrafish\|tissue:Spinal cord	DNBSEQ G400 paired end sequencing of SAMD00799619	DRX648348	RNA seq of spinal cord in zebrafish at 0wpi control 2	1	Total RNA was extracted using RNeasy Micro Kit Qiagen 74104 with DNase treatment RNase Free DNase Set Qiagen 79254. Libraries were constructed from the amplified total RNA.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	DNBSEQ	DNBSEQ-G400		DRP012880	DNBSEQ G400 paired end sequencing of SAMD00799619	14971411400.0	74857057.0	DRR668246	0:100 1:100	A:4160326445;C:3329083037;G:3329123314;T:4150453700;N:2424904	100	100	4160326445	3329083037	3329123314	4150453700	2424904	DRX648348	DRS458861	DRA020617	Osaka University	Osaka University												B	B	biological fallback assumption	bgi	bgi	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2025-05-12	Adult	Adult	Spinal Cord	Nervous System
49	49	DRR668245	DRX648347	DRS458860	DRP012880	PRJDB18466	Comparison of spinal cord regeneration capacity in zebrafish and medaka	PRJDB18466	Other	Unlike mammals zebrafish have the remarkable ability to regenerate many tissues including the spinal cord. Medaka another model fish species has a low regenerative ability in the spinal cord. Therefore comparisons with them advantageous to revealing regeneration specific mechanisms in the spinal cord. The comparison of the spinal cord regeneration abilities of zebrafish and medaka could be a promising research field to elucidate new factors that determine spinal cord regeneration ability.	pubmed:40278963	Zebrafish Intact biological replicate 1	Zebrafish Control 1	SAMD00799618	sample name:Zebrafish Control 1\|biological replicate:1\|biomaterial provider:Center of Medical Innovation and Translational Research Osaka University\|collection date:2024 05 04\|dev stage:Adult\|geo loc name:Japan\|sex:not determined\|strain:AB Zebrafish\|tissue:Spinal cord	DNBSEQ G400 paired end sequencing of SAMD00799618	DRX648347	RNA seq of spinal cord in zebrafish at 0wpi control 1	1	Total RNA was extracted using RNeasy Micro Kit Qiagen 74104 with DNase treatment RNase Free DNase Set Qiagen 79254. Libraries were constructed from the amplified total RNA.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	DNBSEQ	DNBSEQ-G400		DRP012880	DNBSEQ G400 paired end sequencing of SAMD00799618	13912523800.0	69562619.0	DRR668245	0:100 1:100	A:3888902049;C:3079617959;G:3075111814;T:3866655202;N:2236776	100	100	3888902049	3079617959	3075111814	3866655202	2236776	DRX648347	DRS458860	DRA020617	Osaka University	Osaka University												B	B	biological fallback assumption	bgi	bgi	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2025-05-12	Adult	Adult	Spinal Cord	Nervous System
50	50	DRR029944	DRX026962	DRS086502	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		ovulation duirng natural paring	zebrafish ovary isolated from adult fish at ovulation duirng natural paring. [RNAseq]	SAMD00025434	sample name:6 Ovu\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025434	DRX026962	6 Ovu	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025434	351766656.0	9771296.0	DRR029944	0:36	A:79811727;C:85391142;G:90185809;T:96371771;N:6207	36		79811727	85391142	90185809	96371771	6207	DRX026962	DRS086502	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.91956		0.01686		0.76637		0.45997		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Gonad	Reproductive System
51	51	DRR029943	DRX026961	DRS086501	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		oocyte maturation duirng natural paring	zebrafish ovary isolated from adult fish at oocyte maturation duirng natural paring. [RNAseq]	SAMD00025433	sample name:5 OM\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025433	DRX026961	5 OM	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025433	573617016.0	15933806.0	DRR029943	0:36	A:130606804;C:141376330;G:145891720;T:155734276;N:7886	36		130606804	141376330	145891720	155734276	7886	DRX026961	DRS086501	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.91108		0.0173		0.76205		0.46319		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Multi-tissue	Multi-system
52	52	DRR029942	DRX026960	DRS086500	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		in vivo testosterone treatment	zebrafish ovary isolated from adult fish in vivo testoster1 treatment. [RNAseq replicate]	SAMD00025432	sample name:4 Tes rep\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025432	DRX026960	4 Tes rep	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025432	366042528.0	10167848.0	DRR029942	0:36	A:84988522;C:88640326;G:93559022;T:98847003;N:7655	36		84988522	88640326	93559022	98847003	7655	DRX026960	DRS086500	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.91602		0.01846		0.76015		0.46475		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Gonad	Reproductive System
53	53	DRR029941	DRX026959	DRS086499	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		in vivo testosterone treatment	zebrafish ovary isolated from adult fish in vivo testoster1 treatment. [RNAseq]	SAMD00025431	sample name:4 Tes\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025431	DRX026959	4 Tes	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025431	1269835992.0	35273222.0	DRR029941	0:36	A:275250658;C:323605136;G:316729009;T:354204170;N:47019	36		275250658	323605136	316729009	354204170	47019	DRX026959	DRS086499	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.91467		0.02353		0.75962		0.46861		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Gonad	Reproductive System
54	54	DRR029940	DRX026958	DRS086498	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		in vivo diethylstilbestrol DES treatment	zebrafish ovary isolated from adult fish in vivo diethylstilbestrol DES treatment. [RNAseq replicate]	SAMD00025430	sample name:3 DES rep\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025430	DRX026958	3 DES rep	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025430	658651536.0	18295876.0	DRR029940										DRX026958	DRS086498	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.89964		0.01785		0.76451		0.45872		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Gonad	Reproductive System
55	55	DRR029939	DRX026957	DRS086497	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		in vivo diethylstilbestrol DES treatment	zebrafish ovary isolated from adult fish in vivo diethylstilbestrol DES treatment. [RNAseq]	SAMD00025429	sample name:3 DES\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025429	DRX026957	3 DES	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025429	1202024016.0	33389556.0	DRR029939	0:36	A:263319430;C:305852921;G:298798093;T:334008544;N:45028	36		263319430	305852921	298798093	334008544	45028	DRX026957	DRS086497	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.90643		0.02337		0.75008		0.47587		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Gonad	Reproductive System
56	56	DRR029938	DRX026956	DRS086496	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		in vivo maturation inducing hormone DHP treatment	zebrafish ovary isolated from adult fish in vivo maturation inducing horm1 DHP treatment. [RNAseq replicate]	SAMD00025428	sample name:2 DHP rep\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025428	DRX026956	2 DHP rep	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025428	434243088.0	12062308.0	DRR029938	0:36	A:99859342;C:105890785;G:110526688;T:117957580;N:8693	36		99859342	105890785	110526688	117957580	8693	DRX026956	DRS086496	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.91529		0.02061		0.7595		0.45809		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Gonad	Reproductive System
57	57	DRR029937	DRX026955	DRS086495	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		in vivo maturation inducing hormone DHP treatment	zebrafish ovary isolated from adult fish in vivo maturation inducing horm1 DHP treatment. [RNAseq]	SAMD00025427	sample name:2 DHP\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025427	DRX026955	2 DHP	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025427	1463868972.0	40663027.0	DRR029937	0:36	A:316060780;C:369221844;G:372845502;T:405685804;N:55042	36		316060780	369221844	372845502	405685804	55042	DRX026955	DRS086495	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.91556		0.01967		0.76621		0.46541		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Gonad	Reproductive System
58	58	DRR029936	DRX026954	DRS086494	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		in vivo ethanol treatment	zebrafish ovary isolated from adult fish in vivo ethanol treatment. [RNAseq replicate]	SAMD00025426	sample name:1 EtOH rep\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025426	DRX026954	1 EtOH rep	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025426	438020208.0	12167228.0	DRR029936	0:36	A:101672612;C:105602774;G:110120652;T:120615069;N:9101	36		101672612	105602774	110120652	120615069	9101	DRX026954	DRS086494	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.90777		0.01929		0.7652		0.45988		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Gonad	Reproductive System
59	59	DRR029935	DRX026953	DRS086493	DRP004756	PRJDB3475	Identification of ovulation inducing genes selected by the method for in vivo induction of oocyte maturation and ovulation in zebrafish	DRP004756	Other	To identify ovulation inducing genes RNAseq analysis was carried out using samples prepared by in vivo assay system in zebrafish.		in vivo ethanol treatment	zebrafish ovary isolated from adult fish in vivo ethanol treatment. [RNAseq]	SAMD00025425	sample name:1 EtOH\|strain:roy\|tissue type:ovary\|dev stage:adult	Illumina HiSeq 2500 sequencing of SAMD00025425	DRX026953	1 EtOH	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004756	Illumina HiSeq 2500 sequencing of SAMD00025425	1365603372.0	37933427.0	DRR029935	0:36	A:299786286;C:345487829;G:342408447;T:377870789;N:50021	36		299786286	345487829	342408447	377870789	50021	DRX026953	DRS086493	DRA003031	SHIZUOKA\|Shizuoka University	Shizuoka University	1	0.91103		0.02142		0.75402		0.46574		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2019-01-23	Adult	Adult	Gonad	Reproductive System
95	95	DRR050167	DRX045209	DRS025834	DRP003043	PRJDB4416	Transcriptome analysis in ES1 expressing rods of zebrafish	DRP003043	Transcriptome Analysis	Transcriptome analysis using next generation sequencing system for isolated rods from zebrafish of wild type T?bingen long fin TL line. Transgenic zebrafish expressing ES1 and/or EGFP in rods were used.		Zebrafish rods expressing ES1 and EGFP	ES1 3	SAMD00044057	sample name:ES1 EGFP rod 003\|strain:Tubingen long fin\|cell type:rod	Ion Torrent PGM sequencing of SAMD00044057	DRX045209	1	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ION_TORRENT	Ion Torrent PGM	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>105</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003043	Ion Torrent PGM sequencing of SAMD00044057	371748120.0	3469843.0	DRR050167	0:107.14	A:107190409;C:79475572;G:83520360;T:101561779;N:0	107		107190409	79475572	83520360	101561779	0	DRX045209	DRS025834	DRA004229	OSAKA_FB\|Kawamura lab., Frontier Biology, Osaka univ.	Osaka university	1	0.81026		0.26715		0.86953		0.52321		51		B		usable mapping rate	ion_torrent	ion_torrent	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2016-03-09	Undetermined	Undetermined	Fin	Surface Structure
96	96	DRR050166	DRX045208	DRS025833	DRP003043	PRJDB4416	Transcriptome analysis in ES1 expressing rods of zebrafish	DRP003043	Transcriptome Analysis	Transcriptome analysis using next generation sequencing system for isolated rods from zebrafish of wild type T?bingen long fin TL line. Transgenic zebrafish expressing ES1 and/or EGFP in rods were used.		Zebrafish rods expressing ES1 and EGFP	ES1 2	SAMD00044056	sample name:ES1 EGFP rod 002\|strain:Tubingen long fin\|cell type:rod	Ion Torrent PGM sequencing of SAMD00044056	DRX045208	1	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ION_TORRENT	Ion Torrent PGM	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>128</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003043	Ion Torrent PGM sequencing of SAMD00044056	425549011.0	3275261.0	DRR050166	0:129.93	A:126640704;C:86415371;G:90822163;T:121670773;N:0	129		126640704	86415371	90822163	121670773	0	DRX045208	DRS025833	DRA004229	OSAKA_FB\|Kawamura lab., Frontier Biology, Osaka univ.	Osaka university	1	0.80223		0.31429		0.85861		0.5272		57		B		usable mapping rate	ion_torrent	ion_torrent	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2016-03-09	Undetermined	Undetermined	Fin	Surface Structure
97	97	DRR050165	DRX045207	DRS025832	DRP003043	PRJDB4416	Transcriptome analysis in ES1 expressing rods of zebrafish	DRP003043	Transcriptome Analysis	Transcriptome analysis using next generation sequencing system for isolated rods from zebrafish of wild type T?bingen long fin TL line. Transgenic zebrafish expressing ES1 and/or EGFP in rods were used.		Zebrafish rods expressing ES1 and EGFP	ES1 1	SAMD00044055	sample name:ES1 EGFP rod 001\|strain:Tubingen long fin\|cell type:rod	Ion Torrent PGM sequencing of SAMD00044055	DRX045207	1	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ION_TORRENT	Ion Torrent PGM	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>147</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003043	Ion Torrent PGM sequencing of SAMD00044055	584599765.0	3941083.0	DRR050165	0:148.33	A:164329030;C:129885620;G:136727379;T:153657736;N:0	148		164329030	129885620	136727379	153657736	0	DRX045207	DRS025832	DRA004229	OSAKA_FB\|Kawamura lab., Frontier Biology, Osaka univ.	Osaka university	1	0.83769		0.25395		0.83116		0.52784		185		B		usable mapping rate	ion_torrent	ion_torrent	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2016-03-09	Undetermined	Undetermined	Fin	Surface Structure
98	98	DRR050164	DRX045206	DRS025831	DRP003043	PRJDB4416	Transcriptome analysis in ES1 expressing rods of zebrafish	DRP003043	Transcriptome Analysis	Transcriptome analysis using next generation sequencing system for isolated rods from zebrafish of wild type T?bingen long fin TL line. Transgenic zebrafish expressing ES1 and/or EGFP in rods were used.		Zebrafish rods expressing EGFP	EGFP 3	SAMD00044054	sample name:EGFP rod 003\|strain:Tubingen long fin\|cell type:rod	Ion Torrent PGM sequencing of SAMD00044054	DRX045206	1	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ION_TORRENT	Ion Torrent PGM	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>88</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003043	Ion Torrent PGM sequencing of SAMD00044054	343014114.0	3827762.0	DRR050164	0:89.61	A:99421434;C:73070267;G:77738821;T:92783592;N:0	89		99421434	73070267	77738821	92783592	0	DRX045206	DRS025831	DRA004229	OSAKA_FB\|Kawamura lab., Frontier Biology, Osaka univ.	Osaka university	1	0.78953		0.25529		0.87367		0.52148		24		B		usable mapping rate	ion_torrent	ion_torrent	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2016-03-09	Undetermined	Undetermined	Fin	Surface Structure
99	99	DRR050163	DRX045205	DRS025830	DRP003043	PRJDB4416	Transcriptome analysis in ES1 expressing rods of zebrafish	DRP003043	Transcriptome Analysis	Transcriptome analysis using next generation sequencing system for isolated rods from zebrafish of wild type T?bingen long fin TL line. Transgenic zebrafish expressing ES1 and/or EGFP in rods were used.		Zebrafish rods expressing EGFP	EGFP 2	SAMD00044053	sample name:EGFP rod 002\|strain:Tubingen long fin\|cell type:rod	Ion Torrent PGM sequencing of SAMD00044053	DRX045205	1	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ION_TORRENT	Ion Torrent PGM	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>137</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003043	Ion Torrent PGM sequencing of SAMD00044053	533069427.0	3824140.0	DRR050163	0:139.40	A:152608173;C:113928273;G:120051739;T:146481242;N:0	139		152608173	113928273	120051739	146481242	0	DRX045205	DRS025830	DRA004229	OSAKA_FB\|Kawamura lab., Frontier Biology, Osaka univ.	Osaka university	1	0.80412		0.26768		0.85338		0.52255		245		B		usable mapping rate	ion_torrent	ion_torrent	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2016-03-09	Undetermined	Undetermined	Fin	Surface Structure
100	100	DRR050162	DRX045204	DRS025829	DRP003043	PRJDB4416	Transcriptome analysis in ES1 expressing rods of zebrafish	DRP003043	Transcriptome Analysis	Transcriptome analysis using next generation sequencing system for isolated rods from zebrafish of wild type T?bingen long fin TL line. Transgenic zebrafish expressing ES1 and/or EGFP in rods were used.		Zebrafish rods expressing EGFP	EGFP 1	SAMD00044052	sample name:EGFP rod 001\|strain:Tubingen long fin\|cell type:rod	Ion Torrent PGM sequencing of SAMD00044052	DRX045204	1	1	1	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ION_TORRENT	Ion Torrent PGM	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>113</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003043	Ion Torrent PGM sequencing of SAMD00044052	478262965.0	4224064.0	DRR050162	0:113.22	A:136348264;C:104872341;G:113114502;T:123927858;N:0	113		136348264	104872341	113114502	123927858	0	DRX045204	DRS025829	DRA004229	OSAKA_FB\|Kawamura lab., Frontier Biology, Osaka univ.	Osaka university	1	0.86947		0.29839		0.83317		0.51453		80		B		usable mapping rate	ion_torrent	ion_torrent	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2016-03-09	Undetermined	Undetermined	Fin	Surface Structure
131	131	DRR189373	DRX179838	DRS200446	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			Dissociated cells from telencephalon of wild type adult zebrafish 3	SAMD00182216	sample name:Cell Tel 3\|genotype:wild type\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182216	DRX179838	Cell Tel 3	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182216	4142772200.0	20713861.0	DRR189373	0:100 1:100	A:1185533233;C:877739936;G:877025820;T:1202041821;N:431390	100	100	1185533233	877739936	877025820	1202041821	431390	DRX179838	DRS200446	DRA008855	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.9018	0.90073	0.24953	0.25062	0.67884	0.67957	0.49957	0.5402	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
132	132	DRR189372	DRX179837	DRS200445	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			Dissociated cells from telencephalon of wild type adult zebrafish 2	SAMD00182215	sample name:Cell Tel 2\|genotype:wild type\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182215	DRX179837	Cell Tel 2	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182215	5233184600.0	26165923.0	DRR189372	0:100 1:100	A:1522745973;C:1082449570;G:1076728796;T:1550682585;N:577676	100	100	1522745973	1082449570	1076728796	1550682585	577676	DRX179837	DRS200445	DRA008855	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.89481	0.89419	0.27137	0.27018	0.67639	0.67671	0.54949	0.55323	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
133	133	DRR189371	DRX179836	DRS200444	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			Dissociated cells from telencephalon of wild type adult zebrafish 1	SAMD00182214	sample name:Cell Tel 1\|genotype:wild type\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182214	DRX179836	Cell Tel 1	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182214	4407578800.0	22037894.0	DRR189371	0:100 1:100	A:1270948410;C:923917605;G:922122984;T:1290126238;N:463563	100	100	1270948410	923917605	922122984	1290126238	463563	DRX179836	DRS200444	DRA008855	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.90057	0.90117	0.24092	0.24074	0.67598	0.67775	0.53184	0.53433	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
134	134	DRR189370	DRX179835	DRS200415	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form telencephalon of h62A;UAS:GFP adult zebrafish 5	SAMD00182213	sample name:h62A GFP Tel 5\|genotype:hspGFF62A;UAS:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182213	DRX179835	h62A GFP Tel 5	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182213	2904332400.0	14521662.0	DRR189370	0:100 1:100	A:821602205;C:620206517;G:623738781;T:838474359;N:310538	100	100	821602205	620206517	623738781	838474359	310538	DRX179835	DRS200415	DRA008854	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.91925	0.91942	0.14636	0.14584	0.71127	0.71429	0.62818	0.40804	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
135	135	DRR189369	DRX179834	DRS200414	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form telencephalon of h62A;UAS:GFP adult zebrafish 4	SAMD00182212	sample name:h62A GFP Tel 4\|genotype:hspGFF62A;UAS:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182212	DRX179834	h62A GFP Tel 4	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182212	4670374000.0	23351870.0	DRR189369	0:100 1:100	A:1294304230;C:1030286884;G:1032728119;T:1312561064;N:493703	100	100	1294304230	1030286884	1032728119	1312561064	493703	DRX179834	DRS200414	DRA008854	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.92587	0.92725	0.12279	0.12312	0.71056	0.71293	0.57854	0.57882	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
136	136	DRR189368	DRX179833	DRS200413	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form telencephalon of h62A;UAS:GFP adult zebrafish 3	SAMD00182211	sample name:h62A GFP Tel 3\|genotype:hspGFF62A;UAS:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182211	DRX179833	h62A GFP Tel 3	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182211	11487645000.0	57438225.0	DRR189368	0:100 1:100	A:3127119396;C:2611288030;G:2547219656;T:3194997425;N:7020493	100	100	3127119396	2611288030	2547219656	3194997425	7020493	DRX179833	DRS200413	DRA008854	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.91389	0.91371	0.11188	0.11336	0.74576	0.74639	0.56209	0.56027	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
137	137	DRR189367	DRX179832	DRS200412	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form telencephalon of h62A;UAS:GFP adult zebrafish 2	SAMD00182210	sample name:h62A GFP Tel 2\|genotype:hspGFF62A;UAS:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182210	DRX179832	h62A GFP Tel 2	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182210	13536257200.0	67681286.0	DRR189367	0:100 1:100	A:3723068804;C:3049411151;G:2951685691;T:3803778575;N:8312979	100	100	3723068804	3049411151	2951685691	3803778575	8312979	DRX179832	DRS200412	DRA008854	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.9136	0.91493	0.14102	0.14249	0.70534	0.70569	0.58385	0.58171	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
138	138	DRR189366	DRX179831	DRS200411	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form telencephalon of h62A;UAS:GFP adult zebrafish 1	SAMD00182209	sample name:h62A GFP Tel 1\|genotype:hspGFF62A;UAS:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182209	DRX179831	h62A GFP Tel 1	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182209	13057029600.0	65285148.0	DRR189366	0:100 1:100	A:3609997372;C:2912841795;G:2821782510;T:3704302917;N:8105006	100	100	3609997372	2912841795	2821782510	3704302917	8105006	DRX179831	DRS200411	DRA008854	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.90766	0.90786	0.13813	0.14007	0.73677	0.73777	0.55675	0.55743	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
139	139	DRR189365	DRX179830	DRS200432	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form telencephalon of SAGFF120A;UAS:GFP adult zebrafish 4	SAMD00182208	sample name:120A GFP Tel 4\|genotype:SAGFF120A;UAS:GFP\|tissue:brain	Illumina HiSeq 2000 paired end sequencing of SAMD00182208	DRX179830	120A GFP Tel 4	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2000 paired end sequencing of SAMD00182208	4105132200.0	20525661.0	DRR189365	0:100 1:100	A:1171500567;C:874901685;G:872257219;T:1186025546;N:447183	100	100	1171500567	874901685	872257219	1186025546	447183	DRX179830	DRS200432	DRA008853	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.91106	0.90924	0.18729	0.18688	0.69406	0.69589	0.51697	0.51253	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
140	140	DRR189364	DRX179829	DRS200431	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form telencephalon of SAGFF120A;UAS:GFP adult zebrafish 3	SAMD00182207	sample name:120A GFP Tel 3\|genotype:SAGFF120A;UAS:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182207	DRX179829	120A GFP Tel 3	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182207	5062007400.0	25310037.0	DRR189364	0:100 1:100	A:1425414609;C:1105334563;G:1072448536;T:1458726402;N:83290	100	100	1425414609	1105334563	1072448536	1458726402	83290	DRX179829	DRS200431	DRA008853	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.89598	0.89539	0.2645	0.2668	0.69591	0.6971	0.49901	0.49932	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
141	141	DRR189363	DRX179828	DRS200430	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form telencephalon of SAGFF120A;UAS:GFP adult zebrafish 2	SAMD00182206	sample name:120A GFP Tel 2\|genotype:SAGFF120A;UAS:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182206	DRX179828	120A GFP Tel 2	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182206	4148886200.0	20744431.0	DRR189363	0:100 1:100	A:1121946535;C:959659540;G:901840216;T:1165367793;N:72116	100	100	1121946535	959659540	901840216	1165367793	72116	DRX179828	DRS200430	DRA008853	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.89808	0.89803	0.14106	0.14229	0.74057	0.74073	0.58127	0.58258	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
142	142	DRR189362	DRX179827	DRS200429	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form telencephalon of SAGFF120A;UAS:GFP adult zebrafish 1	SAMD00182205	sample name:120A GFP Tel 1\|genotype:SAGFF120A;UAS:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182205	DRX179827	120A GFP Tel 1	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182205	5621230800.0	28106154.0	DRR189362	0:100 1:100	A:1511319423;C:1299516107;G:1236814355;T:1573482053;N:98862	100	100	1511319423	1299516107	1236814355	1573482053	98862	DRX179827	DRS200429	DRA008853	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.90171	0.90205	0.11967	0.12059	0.74083	0.74113	0.61779	0.61682	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
143	143	DRR189361	DRX179826	DRS200425	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form whole brain of HuC:GFP adult zebrafish 4	SAMD00182204	sample name:HuC GFP WB 4\|genotype:HuC:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182204	DRX179826	HuC GFP WB 4	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182204	3641515200.0	18207576.0	DRR189361	0:100 1:100	A:1038686472;C:777269450;G:777179582;T:1047994354;N:385342	100	100	1038686472	777269450	777179582	1047994354	385342	DRX179826	DRS200425	DRA008852	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.91246	0.9127	0.18566	0.18547	0.70201	0.7024	0.47049	0.47102	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
144	144	DRR189360	DRX179825	DRS200424	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form whole brain of HuC:GFP adult zebrafish 3	SAMD00182203	sample name:HuC GFP WB 3\|genotype:HuC:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182203	DRX179825	HuC GFP WB 3	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182203	4692211000.0	23461055.0	DRR189360	0:100 1:100	A:1310884816;C:1036187295;G:997846600;T:1347212024;N:80265	100	100	1310884816	1036187295	997846600	1347212024	80265	DRX179825	DRS200424	DRA008852	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.89626	0.89739	0.18174	0.18338	0.72443	0.72588	0.4577	0.46684	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
145	145	DRR189359	DRX179824	DRS200423	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form whole brain of HuC:GFP adult zebrafish 2	SAMD00182202	sample name:HuC GFP WB 2\|genotype:HuC:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182202	DRX179824	HuC GFP WB 2	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182202	7514071000.0	37570355.0	DRR189359	0:100 1:100	A:2098251885;C:1661407212;G:1597423444;T:2156861774;N:126685	100	100	2098251885	1661407212	1597423444	2156861774	126685	DRX179824	DRS200423	DRA008852	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.89548	0.89691	0.26231	0.26473	0.70358	0.70471	0.4732	0.4753	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
146	146	DRR189358	DRX179823	DRS200422	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.			GFP cells form whole brain of HuC:GFP adult zebrafish 1	SAMD00182201	sample name:HuC GFP WB 1\|genotype:HuC:GFP\|tissue:brain	Illumina HiSeq 2500 paired end sequencing of SAMD00182201	DRX179823	HuC GFP WB 1	1	The cDNA was amplified using SMARTer v4. Sequence libraries were produced from cDNA using Nextera XT DNA library kit Illumina.	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00182201	5175824800.0	25879124.0	DRR189358	0:100 1:100	A:1424688686;C:1174545239;G:1128653980;T:1447848363;N:88532	100	100	1424688686	1174545239	1128653980	1447848363	88532	DRX179823	DRS200422	DRA008852	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.91906	0.91958	0.20879	0.21088	0.74787	0.74876	0.45243	0.45221	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2021-08-08	Adult	Adult	Brain	Nervous System
147	147	DRR051067	DRX045959	DRS057267	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.		These cells are from the same fish as h62A GFP plus Tel	GFP cells from telencephalon of hspGFF62A;UAS:GFP transgenic zebrafish	SAMD00044994	sample name:h62A GFP minus Tel\|tissue type:brain\|genotype:hspGFF62A;UAS:GFP	Illumina HiSeq 2500 paired end sequencing of SAMD00044994	DRX045959	h62A GFP minus Tel	1	cDNA synthesis : clontech SMARTer v3 > Library prep : Illumina Nextera XT DNA Library Preparation Kits	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00044994	17913873600.0	89569368.0	DRR051067	0:100 1:100	A:5009629866;C:3957379257;G:3797879751;T:5144366288;N:4618438	100	100	5009629866	3957379257	3797879751	5144366288	4618438	DRX045959	DRS057267	DRA004277	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.89075	0.89087	0.23044	0.23295	0.69493	0.69769	0.5366	0.54852	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2018-01-06	Undetermined	Undetermined	Brain	Nervous System
148	148	DRR051066	DRX045958	DRS057275	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.		Collected from 40 adult fish by using FACS	GFP+ cells from telencephalon of hspGFF62A;UAS:GFP transgenic zebrafish	SAMD00044995	sample name:h62A GFP plus Tel\|tissue type:brain\|genotype:hspGFF62A;UAS:GFP	Illumina HiSeq 2500 paired end sequencing of SAMD00044995	DRX045958	h62A GFP plus Tel	1	cDNA synthesis : clontech SMARTer v3 > Library prep : Illumina Nextera XT DNA Library Preparation Kits	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00044995	17421256000.0	87106280.0	DRR051066	0:100 1:100	A:4859368314;C:3846634012;G:3717526030;T:4993260256;N:4467388	100	100	4859368314	3846634012	3717526030	4993260256	4467388	DRX045958	DRS057275	DRA004276	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.88127	0.88114	0.22941	0.23155	0.72161	0.72437	0.49284	0.49449	100	100	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	nextera	bulk	unknown	unknown	Japan	2018-01-06	Adult	Adult	Brain	Nervous System
149	149	DRR051065	DRX045957	DRS057272	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.		Telencephalon from adult zebrafrish 30 min post light and electrical shock association in non trace Two Way Active Avoidance conditioning	CS+US telencephalon 30 min post TWAA	SAMD00044990	sample name:CS+US Tel 30\|tissue type:brain\|genotype:WT	Illumina HiSeq 2500 paired end sequencing of SAMD00044990	DRX045957	CS+US Tel 30	1	Illumina Truseq RNA Library Prep Kit v2	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00044990	20239329200.0	101196646.0	DRR051065	0:100 1:100	A:5347169722;C:4777492672;G:4750401220;T:5361888239;N:2377347	100	100	5347169722	4777492672	4750401220	5361888239	2377347	DRX045957	DRS057272	DRA004275	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.93576	0.93353	0.13979	0.14019	0.70043	0.70203	0.48989	0.49214	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-01-06	Adult	Adult	Brain	Nervous System
150	150	DRR051064	DRX045956	DRS057265	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.		Telencephalon from adult zebrafrish 30 min post light stimulation in Two Way Active Avoidance coditioning	CS telencephalon 30 min post TWAA	SAMD00044991	sample name:CS Tel 30\|tissue type:brain\|genotype:WT	Illumina HiSeq 2500 paired end sequencing of SAMD00044991	DRX045956	CS Tel 30	1	Illumina Truseq RNA Library Prep Kit v2	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00044991	29268319600.0	146341598.0	DRR051064	0:100 1:100	A:7777792429;C:6878969107;G:6819275179;T:7788795270;N:3487615	100	100	7777792429	6878969107	6819275179	7788795270	3487615	DRX045956	DRS057265	DRA004274	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.93646	0.93664	0.14051	0.14191	0.70199	0.70374	0.49256	0.49684	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-01-06	Adult	Adult	Brain	Nervous System
151	151	DRR051063	DRX045955	DRS057266	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.		These cells are from the same fish as 120A GFP plus Tel	GFP cells from telencephalon of SAGFFLF120A;UAS:GFP transgenic zebrafish	SAMD00044987	sample name:120A GFP minus Tel\|tissue type:brain\|genotype:SAGFFLF120A;UAS:GFP	Illumina HiSeq 2500 paired end sequencing of SAMD00044987	DRX045955	120A GFP minus Tel	1	cDNA synthesis : clontech SMARTer v2 > Library prep : Illumina TrunSeq DNA Sample Preparation Kits	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>202</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>102</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00044987	15411400120.0	76294060.0	DRR051063	0:101 1:101	A:4583085286;C:3082552426;G:3134669086;T:4606055524;N:5037798	101	101	4583085286	3082552426	3134669086	4606055524	5037798	DRX045955	DRS057266	DRA004273	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.89184	0.8842	0.30246	0.30334	0.69232	0.705	0.52824	0.51492	101	101	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	smarter	bulk	unknown	unknown	Japan	2018-01-06	Undetermined	Undetermined	Brain	Nervous System
152	152	DRR051062	DRX045954	DRS057271	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.		Collected from 40 adult fish by using FACS	GFP+ cells from telencephalon of SAGFFLF120A;UAS:GFP transgenic zebrafish	SAMD00044988	sample name:120A GFP plus Tel\|tissue type:brain\|genotype:SAGFFLF120A;UAS:GFP	Illumina HiSeq 2500 paired end sequencing of SAMD00044988	DRX045954	120A GFP plus Tel	1	cDNA synthesis : clontech SMARTer v2 > Library prep : Illumina TrunSeq DNA Sample Preparation Kits	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>202</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>102</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00044988	9916242014.0	49090307.0	DRR051062	0:101 1:101	A:2991626000;C:1935418605;G:1974202781;T:3011783158;N:3211470	101	101	2991626000	1935418605	1974202781	3011783158	3211470	DRX045954	DRS057271	DRA004272	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.87779	0.86382	0.2948	0.28993	0.72809	0.74075	0.50317	0.49169	101	101	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	smarter	bulk	unknown	unknown	Japan	2018-01-06	Adult	Adult	Brain	Nervous System
153	153	DRR051061	DRX045953	DRS057274	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.		Collected from 10 adult fish by using FACS	GFP+ cells from whole brain of SAGFFLF231A;UAS:GFP transgenic zebrafish	SAMD00044989	sample name:231A GFP plus WB\|tissue type:brain\|genotype:SAGFFLF231A;UAS:GFP	Illumina HiSeq 2500 paired end sequencing of SAMD00044989	DRX045953	231A GFP plus WB	1	cDNA synthesis : clontech SMARTer v2 > Library prep : Illumina TrunSeq DNA Sample Preparation Kits	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>202</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>102</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00044989	27230654000.0	136153270.0	DRR051061	0:101 1:99	A:7929214734;C:5506861409;G:5563593280;T:8059057191;N:171927386	101	99	7929214734	5506861409	5563593280	8059057191	171927386	DRX045953	DRS057274	DRA004271	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.88462	0.88282	0.26215	0.26067	0.72468	0.73555	0.48369	0.48285	101	99	B	B	biological fallback assumption	illumina	hiseq_era	full_length	cdna_unspecified	smarter	bulk	unknown	unknown	Japan	2018-01-06	Adult	Adult	Brain	Nervous System
154	154	DRR051060	DRX045952	DRS057269	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.		Telencephalon of adult zebrafrish barin	zebrafihsh telencephalon	SAMD00044992	sample name:Tel\|tissue type:brain\|genotype:WT	Illumina HiSeq 2500 paired end sequencing of SAMD00044992	DRX045952	Tel	1	Illumina Truseq RNA Library Prep Kit v2	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>202</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>102</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00044992	20006128076.0	99040238.0	DRR051060	0:101 1:101	A:5393556813;C:4623783008;G:4592812230;T:5384415659;N:11560366	101	101	5393556813	4623783008	4592812230	5384415659	11560366	DRX045952	DRS057269	DRA004270	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.94215	0.94001	0.16398	0.16585	0.69331	0.69479	0.4872	0.48516	101	101	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-01-06	Adult	Adult	Brain	Nervous System
155	155	DRR051059	DRX045951	DRS057270	DRP003977	PRJDB4470	Gene expression analysis of the zebrafish brain	DRP003977	Other	Gene expression profiling by RNA seq of specific regions and subpopulations of neurons in the zebrafish brain that control behaviors.		Whole brain of adult zebrafish	zebrafish whole brain	SAMD00044993	sample name:WB\|tissue type:brain\|genotype:WT	Illumina HiSeq 2500 paired end sequencing of SAMD00044993	DRX045951	WB	1	Illumina Truseq RNA Library Prep Kit v2	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>202</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>102</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP003977	Illumina HiSeq 2500 paired end sequencing of SAMD00044993	25283347776.0	125165088.0	DRR051059	0:101 1:101	A:6845696813;C:5810492697;G:5775241119;T:6837142940;N:14774207	101	101	6845696813	5810492697	5775241119	6837142940	14774207	DRX045951	DRS057270	DRA004269	NIG\|National Institute of Genetics (Japan)	National Institute of Genetics (Japan)	2	0.94203	0.94067	0.15107	0.15158	0.68651	0.6882	0.49596	0.49589	101	101	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-01-06	Adult	Adult	Brain	Nervous System
168	168	DRR075402	DRX069316	DRS075497	DRP004473	PRJDB5226	Effects of local gut tumor on whole organismal gene expressions in zebrafish	DRP004473	Other	How tumors affects whole organismal physiology remains largely unknown. To address this we established the novel gut tumor model in zebrafish Danio rerio. This model develops tumor at an early stage of juvenile development when zebrafish larvae are small <4mm enabling us to perform whole organismal RNA seq experiments. Control or tumor bearing zebrafish were dissected into the three parts under microscope: the liver the gut/gut tumor and others. Tissues from >10 individuals were pooled and RNA extracted. Analyses on these RNA seq samples identified a set of host genes affected by the gut tumor contributing to discovering novel tumor organ interactions and their mediators in zebrafish.		The liver of tumor fish 7dpf	Tumor liver	SAMD00065416	sample name:6 Tumor liver 150701 Hiseq3A l3 022\|tissue type:Liver	Illumina HiSeq 2500 sequencing of SAMD00065416	DRX069316	Tumor liver	1	Agilent SureSelect Strand Specific RNA Prep Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004473	Illumina HiSeq 2500 sequencing of SAMD00065416	1091167236.0	30310201.0	DRR075402	0:36	A:272216839;C:257523620;G:259746158;T:301642763;N:37856	36		272216839	257523620	259746158	301642763	37856	DRX069316	DRS075497	DRA005199	ATR\|The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	1	0.90443		0.08935		0.71863		0.51145		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2018-09-19	Larval	Larval	Multi-tissue	Multi-system
169	169	DRR075401	DRX069315	DRS075496	DRP004473	PRJDB5226	Effects of local gut tumor on whole organismal gene expressions in zebrafish	DRP004473	Other	How tumors affects whole organismal physiology remains largely unknown. To address this we established the novel gut tumor model in zebrafish Danio rerio. This model develops tumor at an early stage of juvenile development when zebrafish larvae are small <4mm enabling us to perform whole organismal RNA seq experiments. Control or tumor bearing zebrafish were dissected into the three parts under microscope: the liver the gut/gut tumor and others. Tissues from >10 individuals were pooled and RNA extracted. Analyses on these RNA seq samples identified a set of host genes affected by the gut tumor contributing to discovering novel tumor organ interactions and their mediators in zebrafish.		The gut of tumor fish 7dpf	Tumor gut	SAMD00065415	sample name:5 Tumor gut 150701 Hiseq3A l3 021\|tissue type:Gut	Illumina HiSeq 2500 sequencing of SAMD00065415	DRX069315	Tumor gut	1	Agilent SureSelect Strand Specific RNA Prep Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004473	Illumina HiSeq 2500 sequencing of SAMD00065415	1423792872.0	39549802.0	DRR075401	0:36	A:342328685;C:346616167;G:341519547;T:393278536;N:49937	36		342328685	346616167	341519547	393278536	49937	DRX069315	DRS075496	DRA005199	ATR\|The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	1	0.91303		0.0869		0.70494		0.44332		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2018-09-19	Larval	Larval	Multi-tissue	Multi-system
170	170	DRR075400	DRX069314	DRS075495	DRP004473	PRJDB5226	Effects of local gut tumor on whole organismal gene expressions in zebrafish	DRP004473	Other	How tumors affects whole organismal physiology remains largely unknown. To address this we established the novel gut tumor model in zebrafish Danio rerio. This model develops tumor at an early stage of juvenile development when zebrafish larvae are small <4mm enabling us to perform whole organismal RNA seq experiments. Control or tumor bearing zebrafish were dissected into the three parts under microscope: the liver the gut/gut tumor and others. Tissues from >10 individuals were pooled and RNA extracted. Analyses on these RNA seq samples identified a set of host genes affected by the gut tumor contributing to discovering novel tumor organ interactions and their mediators in zebrafish.		The remaining part of body of tumor fish 7dpf	Tumor body	SAMD00065414	sample name:4 Tumor body 150701 Hiseq3A l3 020\|tissue type:Body	Illumina HiSeq 2500 sequencing of SAMD00065414	DRX069314	Tumor body	1	Agilent SureSelect Strand Specific RNA Prep Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004473	Illumina HiSeq 2500 sequencing of SAMD00065414	1168514964.0	32458749.0	DRR075400	0:36	A:286579925;C:275496498;G:278133055;T:328265078;N:40408	36		286579925	275496498	278133055	328265078	40408	DRX069314	DRS075495	DRA005199	ATR\|The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	1	0.89927		0.15051		0.66714		0.47579		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2018-09-19	Larval	Larval	Multi-tissue	Multi-system
171	171	DRR075399	DRX069313	DRS075494	DRP004473	PRJDB5226	Effects of local gut tumor on whole organismal gene expressions in zebrafish	DRP004473	Other	How tumors affects whole organismal physiology remains largely unknown. To address this we established the novel gut tumor model in zebrafish Danio rerio. This model develops tumor at an early stage of juvenile development when zebrafish larvae are small <4mm enabling us to perform whole organismal RNA seq experiments. Control or tumor bearing zebrafish were dissected into the three parts under microscope: the liver the gut/gut tumor and others. Tissues from >10 individuals were pooled and RNA extracted. Analyses on these RNA seq samples identified a set of host genes affected by the gut tumor contributing to discovering novel tumor organ interactions and their mediators in zebrafish.		The liver of control fish 7dpf	Control liver	SAMD00065413	sample name:3 control liver 150701 Hiseq3A l3 019\|tissue type:Liver	Illumina HiSeq 2500 sequencing of SAMD00065413	DRX069313	Control liver	1	Agilent SureSelect Strand Specific RNA Prep Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004473	Illumina HiSeq 2500 sequencing of SAMD00065413	951579036.0	26432751.0	DRR075399	0:36	A:231570583;C:228182815;G:227223430;T:264569214;N:32994	36		231570583	228182815	227223430	264569214	32994	DRX069313	DRS075494	DRA005199	ATR\|The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	1	0.8903		0.08667		0.7236		0.51557		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2018-09-19	Larval	Larval	Liver	Liver and Biliary System
172	172	DRR075398	DRX069312	DRS075493	DRP004473	PRJDB5226	Effects of local gut tumor on whole organismal gene expressions in zebrafish	DRP004473	Other	How tumors affects whole organismal physiology remains largely unknown. To address this we established the novel gut tumor model in zebrafish Danio rerio. This model develops tumor at an early stage of juvenile development when zebrafish larvae are small <4mm enabling us to perform whole organismal RNA seq experiments. Control or tumor bearing zebrafish were dissected into the three parts under microscope: the liver the gut/gut tumor and others. Tissues from >10 individuals were pooled and RNA extracted. Analyses on these RNA seq samples identified a set of host genes affected by the gut tumor contributing to discovering novel tumor organ interactions and their mediators in zebrafish.		The gut of control fish 7dpf	Control gut	SAMD00065412	sample name:2 control gut 150701 Hiseq3A l3 018\|tissue type:Gut	Illumina HiSeq 2500 sequencing of SAMD00065412	DRX069312	Control gut	1	Agilent SureSelect Strand Specific RNA Prep Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004473	Illumina HiSeq 2500 sequencing of SAMD00065412	1008093492.0	28002597.0	DRR075398	0:36	A:230431417;C:251640901;G:244174255;T:281811580;N:35339	36		230431417	251640901	244174255	281811580	35339	DRX069312	DRS075493	DRA005199	ATR\|The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	1	0.9173		0.07181		0.72017		0.45193		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2018-09-19	Larval	Larval	Gut	Digestive System
173	173	DRR075397	DRX069311	DRS075492	DRP004473	PRJDB5226	Effects of local gut tumor on whole organismal gene expressions in zebrafish	DRP004473	Other	How tumors affects whole organismal physiology remains largely unknown. To address this we established the novel gut tumor model in zebrafish Danio rerio. This model develops tumor at an early stage of juvenile development when zebrafish larvae are small <4mm enabling us to perform whole organismal RNA seq experiments. Control or tumor bearing zebrafish were dissected into the three parts under microscope: the liver the gut/gut tumor and others. Tissues from >10 individuals were pooled and RNA extracted. Analyses on these RNA seq samples identified a set of host genes affected by the gut tumor contributing to discovering novel tumor organ interactions and their mediators in zebrafish.		The remaining part of body of control fish 7dpf	Control body	SAMD00065411	sample name:1 control body 150701 Hiseq3A l3 017\|tissue type:Body	Illumina HiSeq 2500 sequencing of SAMD00065411	DRX069311	Control body	1	Agilent SureSelect Strand Specific RNA Prep Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	SINGLE	ILLUMINA	Illumina HiSeq 2500	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>36</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004473	Illumina HiSeq 2500 sequencing of SAMD00065411	2653100352.0	73697232.0	DRR075397	0:36	A:656791658;C:620507513;G:625038612;T:750671135;N:91434	36		656791658	620507513	625038612	750671135	91434	DRX069311	DRS075492	DRA005199	ATR\|The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International	1	0.89666		0.15749		0.67048		0.47755		36		B		usable mapping rate	illumina	hiseq_era	unknown	cdna_unspecified	unknown	bulk	unknown	unknown	Japan	2018-09-19	Larval	Larval	Trunk	Surface Structure
186	186	DRR162555	DRX153174	DRS083235	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 39 mpf zebrafish replicate5	SAMD00152503	sample name:m39 5\|age:39 month\|biological replicate:5\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152503	DRX153174	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152503	1721110400.0	8605552.0	DRR162555	0:100 1:100	A:449613689;C:409864831;G:412050483;T:447085797;N:2495600	100	100	449613689	409864831	412050483	447085797	2495600	DRX153174	DRS083235	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.96635	0.94149	0.03182	0.03006	0.81631	0.82449	0.53424	0.53879	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
187	187	DRR162554	DRX153173	DRS083234	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 39 mpf zebrafish replicate4	SAMD00152502	sample name:m39 4\|age:39 month\|biological replicate:4\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152502	DRX153173	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152502	771888600.0	3859443.0	DRR162554	0:100 1:100	A:209886275;C:175458903;G:177995758;T:207451261;N:1096403	100	100	209886275	175458903	177995758	207451261	1096403	DRX153173	DRS083234	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.95789	0.92781	0.03714	0.03527	0.80075	0.80917	0.5336	0.53957	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
188	188	DRR162553	DRX153172	DRS083233	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 39 mpf zebrafish replicate3	SAMD00152501	sample name:m39 3\|age:39 month\|biological replicate:3\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152501	DRX153172	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152501	1750331200.0	8751656.0	DRR162553	0:100 1:100	A:470950871;C:402540953;G:405453019;T:468920181;N:2466176	100	100	470950871	402540953	405453019	468920181	2466176	DRX153172	DRS083233	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.96458	0.93283	0.03644	0.03456	0.82169	0.82858	0.5481	0.54735	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
189	189	DRR162552	DRX153171	DRS083232	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 39 mpf zebrafish replicate2	SAMD00152500	sample name:m39 2\|age:39 month\|biological replicate:2\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152500	DRX153171	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152500	1067838800.0	5339194.0	DRR162552	0:100 1:100	A:298532843;C:233982076;G:237439824;T:296396354;N:1487703	100	100	298532843	233982076	237439824	296396354	1487703	DRX153171	DRS083232	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.95828	0.92985	0.04771	0.04523	0.79488	0.80294	0.49034	0.56243	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
190	190	DRR162551	DRX153170	DRS083231	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 39 mpf zebrafish replicate1	SAMD00152499	sample name:m39 1\|age:39 month\|biological replicate:1\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152499	DRX153170	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152499	1067002000.0	5335010.0	DRR162551	0:100 1:100	A:278427675;C:254036661;G:255175092;T:277557906;N:1804666	100	100	278427675	254036661	255175092	277557906	1804666	DRX153170	DRS083231	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.95438	0.92802	0.05748	0.05502	0.79192	0.79819	0.52464	0.52682	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
191	191	DRR162550	DRX153169	DRS083230	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 16 mpf zebrafish replicate5	SAMD00152498	sample name:m16 5\|age:16 month\|biological replicate:5\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152498	DRX153169	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152498	930106600.0	4650533.0	DRR162550	0:100 1:100	A:242979975;C:221639069;G:223234689;T:240720049;N:1532818	100	100	242979975	221639069	223234689	240720049	1532818	DRX153169	DRS083230	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.96995	0.94193	0.02755	0.02642	0.84816	0.85549	0.57425	0.52005	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
192	192	DRR162549	DRX153168	DRS083229	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 16 mpf zebrafish replicate4	SAMD00152497	sample name:m16 4\|age:16 month\|biological replicate:4\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152497	DRX153168	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152497	785247000.0	3926235.0	DRR162549	0:100 1:100	A:201565472;C:190838604;G:191695270;T:199849282;N:1298372	100	100	201565472	190838604	191695270	199849282	1298372	DRX153168	DRS083229	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.96925	0.95032	0.02522	0.02431	0.83528	0.84135	0.45946	0.52823	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
193	193	DRR162548	DRX153167	DRS083228	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 16 mpf zebrafish replicate3	SAMD00152496	sample name:m16 3\|age:16 month\|biological replicate:3\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152496	DRX153167	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152496	712659400.0	3563297.0	DRR162548	0:100 1:100	A:184163345;C:171746662;G:173153688;T:182436940;N:1158765	100	100	184163345	171746662	173153688	182436940	1158765	DRX153167	DRS083228	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.97092	0.94516	0.02464	0.02354	0.82925	0.83721	0.55084	0.55847	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
194	194	DRR162547	DRX153166	DRS083227	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 16 mpf zebrafish replicate2	SAMD00152495	sample name:m16 2\|age:16 month\|biological replicate:2\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152495	DRX153166	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152495	795706600.0	3978533.0	DRR162547	0:100 1:100	A:205087113;C:192675977;G:193703665;T:203054171;N:1185674	100	100	205087113	192675977	193703665	203054171	1185674	DRX153166	DRS083227	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.9693	0.94476	0.03018	0.02924	0.81615	0.82564	0.52874	0.52813	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
195	195	DRR162546	DRX153165	DRS083226	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 16 mpf zebrafish replicate1	SAMD00152494	sample name:m16 1\|age:16 month\|biological replicate:1\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152494	DRX153165	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152494	851036600.0	4255183.0	DRR162546	0:100 1:100	A:224583615;C:200474581;G:201849331;T:222664124;N:1464949	100	100	224583615	200474581	201849331	222664124	1464949	DRX153165	DRS083226	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.96969	0.95023	0.02693	0.02563	0.84567	0.85218	0.58468	0.58831	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
196	196	DRR162545	DRX153164	DRS083225	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 7 mpf zebrafish replicate5	SAMD00152493	sample name:m07 5\|age:7 month\|biological replicate:5\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152493	DRX153164	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152493	1024543600.0	5122718.0	DRR162545	0:100 1:100	A:255646947;C:257072899;G:256778094;T:253384531;N:1661129	100	100	255646947	257072899	256778094	253384531	1661129	DRX153164	DRS083225	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.97634	0.95731	0.01486	0.01517	0.87592	0.89252	0.50702	0.50609	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
197	197	DRR162544	DRX153163	DRS083224	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 7 mpf zebrafish replicate4	SAMD00152492	sample name:m07 4\|age:7 month\|biological replicate:4\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152492	DRX153163	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152492	1039809600.0	5199048.0	DRR162544	0:100 1:100	A:260916983;C:258869102;G:260873844;T:257458225;N:1691446	100	100	260916983	258869102	260873844	257458225	1691446	DRX153163	DRS083224	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.97612	0.94137	0.01751	0.01634	0.85527	0.86367	0.50786	0.50679	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
198	198	DRR162543	DRX153162	DRS083223	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 7 mpf zebrafish replicate3	SAMD00152491	sample name:m07 3\|age:7 month\|biological replicate:3\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152491	DRX153162	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152491	1081187000.0	5405935.0	DRR162543	0:100 1:100	A:272702030;C:267625388;G:270437426;T:268730517;N:1691639	100	100	272702030	267625388	270437426	268730517	1691639	DRX153162	DRS083223	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.97471	0.93399	0.02247	0.02056	0.86876	0.87519	0.54092	0.53031	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
199	199	DRR162542	DRX153161	DRS083222	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 7 mpf zebrafish replicate2	SAMD00152490	sample name:m07 2\|age:7 month\|biological replicate:2\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152490	DRX153161	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152490	1375265200.0	6876326.0	DRR162542	0:100 1:100	A:352606827;C:334370724;G:335176090;T:350910646;N:2200913	100	100	352606827	334370724	335176090	350910646	2200913	DRX153161	DRS083222	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.96089	0.92859	0.02237	0.02125	0.76824	0.7777	0.51352	0.51124	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
200	200	DRR162541	DRX153160	DRS083221	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 7 mpf zebrafish replicate1	SAMD00152489	sample name:m07 1\|age:7 month\|biological replicate:1\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152489	DRX153160	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152489	1331668400.0	6658342.0	DRR162541	0:100 1:100	A:339618846;C:325463872;G:328670370;T:335855545;N:2059767	100	100	339618846	325463872	328670370	335855545	2059767	DRX153160	DRS083221	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.9743	0.93669	0.02259	0.02116	0.84676	0.85476	0.54434	0.53825	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Muscle	Muscular System
201	201	DRR162540	DRX153159	DRS083220	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 2 mpf zebrafish replicate5	SAMD00152488	sample name:m02 5\|age:2 month\|biological replicate:5\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152488	DRX153159	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152488	1063436200.0	5317181.0	DRR162540	0:100 1:100	A:275438061;C:255805442;G:257091950;T:273487067;N:1613680	100	100	275438061	255805442	257091950	273487067	1613680	DRX153159	DRS083220	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.96295	0.92896	0.04409	0.0427	0.75355	0.76499	0.49339	0.50418	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Juvenile	Juvenile	Muscle	Muscular System
202	202	DRR162539	DRX153158	DRS083219	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 2 mpf zebrafish replicate4	SAMD00152487	sample name:m02 4\|age:2 month\|biological replicate:4\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152487	DRX153158	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152487	1233640200.0	6168201.0	DRR162539	0:100 1:100	A:318959646;C:297211942;G:300002324;T:315647570;N:1818718	100	100	318959646	297211942	300002324	315647570	1818718	DRX153158	DRS083219	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.96511	0.92512	0.04175	0.04058	0.77607	0.78835	0.48689	0.50535	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Juvenile	Juvenile	Muscle	Muscular System
203	203	DRR162538	DRX153157	DRS083218	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 2 mpf zebrafish replicate3	SAMD00152486	sample name:m02 3\|age:2 month\|biological replicate:3\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152486	DRX153157	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152486	675957200.0	3379786.0	DRR162538	0:100 1:100	A:173033870;C:164578076;G:165481544;T:171780353;N:1083357	100	100	173033870	164578076	165481544	171780353	1083357	DRX153157	DRS083218	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.97251	0.94405	0.03347	0.03256	0.82432	0.83159	0.55228	0.47905	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Juvenile	Juvenile	Muscle	Muscular System
204	204	DRR162537	DRX153156	DRS083217	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 2 mpf zebrafish replicate2	SAMD00152485	sample name:m02 2\|age:2 month\|biological replicate:2\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152485	DRX153156	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152485	1260768000.0	6303840.0	DRR162537	0:100 1:100	A:319433176;C:310903964;G:312279388;T:316219239;N:1932233	100	100	319433176	310903964	312279388	316219239	1932233	DRX153156	DRS083217	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.96774	0.93275	0.04099	0.04003	0.76919	0.79626	0.51687	0.50638	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Juvenile	Juvenile	Muscle	Muscular System
205	205	DRR162536	DRX153155	DRS083216	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			muscle sample from 2 mpf zebrafish replicate1	SAMD00152484	sample name:m02 1\|age:2 month\|biological replicate:1\|tissue:muscle	Illumina HiSeq 2000 paired end sequencing of SAMD00152484	DRX153155	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152484	1318898400.0	6594492.0	DRR162536	0:100 1:100	A:337402722;C:321381897;G:323422706;T:334658718;N:2032357	100	100	337402722	321381897	323422706	334658718	2032357	DRX153155	DRS083216	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.9692	0.93768	0.02944	0.02852	0.79431	0.80359	0.50636	0.51065	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Juvenile	Juvenile	Muscle	Muscular System
206	206	DRR162535	DRX153154	DRS083215	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 39 mpf zebrafish replicate5	SAMD00152483	sample name:l39 5\|age:39 month\|biological replicate:5\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152483	DRX153154	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152483	1222686600.0	6113433.0	DRR162535	0:100 1:100	A:332248505;C:277678269;G:280475826;T:332221614;N:62386	100	100	332248505	277678269	280475826	332221614	62386	DRX153154	DRS083215	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.94973	0.95168	0.05815	0.0574	0.80714	0.80992	0.2996	0.29323	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
207	207	DRR162534	DRX153153	DRS083214	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 39 mpf zebrafish replicate4	SAMD00152482	sample name:l39 4\|age:39 month\|biological replicate:4\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152482	DRX153153	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152482	1640116400.0	8200582.0	DRR162534	0:100 1:100	A:453347555;C:365904202;G:366450625;T:454324883;N:89135	100	100	453347555	365904202	366450625	454324883	89135	DRX153153	DRS083214	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.93653	0.93054	0.09033	0.08864	0.7417	0.74341	0.47622	0.47803	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
208	208	DRR162533	DRX153152	DRS083213	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 39 mpf zebrafish replicate3	SAMD00152481	sample name:l39 3\|age:39 month\|biological replicate:3\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152481	DRX153152	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152481	1676561000.0	8382805.0	DRR162533	0:100 1:100	A:458233101;C:380058901;G:378567207;T:459616427;N:85364	100	100	458233101	380058901	378567207	459616427	85364	DRX153152	DRS083213	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.94088	0.93572	0.08357	0.08412	0.78516	0.79383	0.58177	0.569	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
209	209	DRR162532	DRX153151	DRS083212	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 39 mpf zebrafish replicate2	SAMD00152480	sample name:l39 2\|age:39 month\|biological replicate:2\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152480	DRX153151	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152480	1818896600.0	9094483.0	DRR162532	0:100 1:100	A:513353000;C:395752133;G:399719533;T:509976715;N:95219	100	100	513353000	395752133	399719533	509976715	95219	DRX153151	DRS083212	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.92557	0.90731	0.10552	0.10279	0.73655	0.73963	0.55463	0.53901	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
210	210	DRR162531	DRX153150	DRS083211	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 39 mpf zebrafish replicate1	SAMD00152479	sample name:l39 1\|age:39 month\|biological replicate:1\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152479	DRX153150	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152479	1365495000.0	6827475.0	DRR162531	0:100 1:100	A:397961331;C:285103195;G:285088182;T:397271923;N:70369	100	100	397961331	285103195	285088182	397271923	70369	DRX153150	DRS083211	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.91718	0.9094	0.12236	0.12108	0.74905	0.75213	0.52227	0.52956	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
211	211	DRR162530	DRX153149	DRS083210	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 16 mpf zebrafish replicate5	SAMD00152478	sample name:l16 5\|age:16 month\|biological replicate:5\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152478	DRX153149	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152478	1350377800.0	6751889.0	DRR162530	0:100 1:100	A:386028757;C:288772838;G:290958369;T:384548737;N:69099	100	100	386028757	288772838	290958369	384548737	69099	DRX153149	DRS083210	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.93516	0.92365	0.08362	0.08141	0.82446	0.82769	0.62055	0.62498	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
212	212	DRR162529	DRX153148	DRS083209	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 16 mpf zebrafish replicate4	SAMD00152477	sample name:l16 4\|age:16 month\|biological replicate:4\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152477	DRX153148	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152477	1336103200.0	6680516.0	DRR162529	0:100 1:100	A:382497123;C:284680985;G:285893391;T:382963813;N:67888	100	100	382497123	284680985	285893391	382963813	67888	DRX153148	DRS083209	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.9394	0.94216	0.0736	0.07267	0.81909	0.82063	0.34071	0.35081	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
213	213	DRR162528	DRX153147	DRS083208	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 16 mpf zebrafish replicate3	SAMD00152476	sample name:l16 3\|age:16 month\|biological replicate:3\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152476	DRX153147	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152476	1382207400.0	6911037.0	DRR162528	0:100 1:100	A:389944369;C:300605191;G:301498468;T:390090609;N:68763	100	100	389944369	300605191	301498468	390090609	68763	DRX153147	DRS083208	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.93205	0.92544	0.08167	0.0803	0.80164	0.80472	0.60042	0.52988	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
214	214	DRR162527	DRX153146	DRS083207	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 16 mpf zebrafish replicate2	SAMD00152475	sample name:l16 2\|age:16 month\|biological replicate:2\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152475	DRX153146	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152475	1420870200.0	7104351.0	DRR162527	0:100 1:100	A:390283357;C:318567042;G:320772328;T:391175121;N:72352	100	100	390283357	318567042	320772328	391175121	72352	DRX153146	DRS083207	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.95451	0.95673	0.03982	0.04064	0.83765	0.84053	0.16589	0.16881	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
215	215	DRR162526	DRX153145	DRS083206	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 16 mpf zebrafish replicate1	SAMD00152474	sample name:l16 1\|age:16 month\|biological replicate:1\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152474	DRX153145	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152474	1153415600.0	5767078.0	DRR162526	0:100 1:100	A:331352139;C:244998423;G:248301842;T:328704463;N:58733	100	100	331352139	244998423	248301842	328704463	58733	DRX153145	DRS083206	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.95303	0.95385	0.03203	0.03206	0.86592	0.86734	0.23054	0.23207	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
216	216	DRR162525	DRX153144	DRS083205	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 7 mpf zebrafish replicate5	SAMD00152473	sample name:l07 5\|age:7 month\|biological replicate:5\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152473	DRX153144	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152473	890770600.0	4453853.0	DRR162525	0:100 1:100	A:256905080;C:188672401;G:188524159;T:256621928;N:47032	100	100	256905080	188672401	188524159	256621928	47032	DRX153144	DRS083205	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.9268	0.9203	0.08741	0.08714	0.79013	0.80292	0.60305	0.60127	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
217	217	DRR162524	DRX153143	DRS083204	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 7 mpf zebrafish replicate4	SAMD00152472	sample name:l07 4\|age:7 month\|biological replicate:4\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152472	DRX153143	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152472	1483455800.0	7417279.0	DRR162524	0:100 1:100	A:436293893;C:304891230;G:308137580;T:434055810;N:77287	100	100	436293893	304891230	308137580	434055810	77287	DRX153143	DRS083204	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.91896	0.90192	0.0717	0.07014	0.81085	0.8132	0.58351	0.59366	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
218	218	DRR162523	DRX153142	DRS083203	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 7 mpf zebrafish replicate3	SAMD00152471	sample name:l07 3\|age:7 month\|biological replicate:3\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152471	DRX153142	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152471	1864489400.0	9322447.0	DRR162523	0:100 1:100	A:502417821;C:427210740;G:431014519;T:503749673;N:96647	100	100	502417821	427210740	431014519	503749673	96647	DRX153142	DRS083203	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.95976	0.96143	0.04395	0.04468	0.79448	0.79782	0.263	0.26714	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
219	219	DRR162522	DRX153141	DRS083202	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 7 mpf zebrafish replicate2	SAMD00152470	sample name:l07 2\|age:7 month\|biological replicate:2\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152470	DRX153141	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152470	2033108200.0	10165541.0	DRR162522	0:100 1:100	A:551635703;C:463271027;G:463695854;T:554401182;N:104434	100	100	551635703	463271027	463695854	554401182	104434	DRX153141	DRS083202	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.94795	0.94217	0.05903	0.0589	0.79131	0.79462	0.54196	0.5496	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
220	220	DRR162521	DRX153140	DRS083201	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 7 mpf zebrafish replicate1	SAMD00152469	sample name:l07 1\|age:7 month\|biological replicate:1\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152469	DRX153140	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152469	1468954400.0	7344772.0	DRR162521	0:100 1:100	A:395399684;C:336608951;G:340607200;T:396263402;N:75163	100	100	395399684	336608951	340607200	396263402	75163	DRX153140	DRS083201	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.95562	0.95778	0.02931	0.02966	0.86667	0.8686	0.15375	0.16038	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Adult	Adult	Liver	Liver and Biliary System
221	221	DRR162520	DRX153139	DRS083200	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 2 mpf zebrafish replicate5	SAMD00152468	sample name:l02 5\|age:2 month\|biological replicate:5\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152468	DRX153139	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152468	1264817800.0	6324089.0	DRR162520	0:100 1:100	A:351295111;C:280181229;G:281044764;T:352232836;N:63860	100	100	351295111	280181229	281044764	352232836	63860	DRX153139	DRS083200	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.93687	0.93419	0.07774	0.07776	0.7587	0.7609	0.56082	0.56748	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Juvenile	Juvenile	Liver	Liver and Biliary System
222	222	DRR162519	DRX153138	DRS083199	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 2 mpf zebrafish replicate4	SAMD00152467	sample name:l02 4\|age:2 month\|biological replicate:4\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152467	DRX153138	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152467	1762366200.0	8811831.0	DRR162519	0:100 1:100	A:481999545;C:397566169;G:399183135;T:483526493;N:90858	100	100	481999545	397566169	399183135	483526493	90858	DRX153138	DRS083199	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.93994	0.93528	0.06039	0.05936	0.75037	0.75394	0.52945	0.52961	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Juvenile	Juvenile	Liver	Liver and Biliary System
223	223	DRR162518	DRX153137	DRS083198	DRP004696	PRJDB7713	Age associated transcriptome analysis in 5 tissues of zebrafish	DRP004696	Transcriptome Analysis	We performed transcriptome analysis for brain gill heart liver and muscle from 2 month 7 month 16 month and 39 mpf zebrafish. We analyzed age associated gene expression pattern in zebrafish and compared with similar public transcriptome data of rat Yu et al. 2014.			liver sample from 2 mpf zebrafish replicate3	SAMD00152466	sample name:l02 3\|age:2 month\|biological replicate:3\|tissue:liver	Illumina HiSeq 2000 paired end sequencing of SAMD00152466	DRX153137	1	1	Illumina TruSeq Stranded mRNA HT Kit	RNA-Seq	TRANSCRIPTOMIC	cDNA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	DRP004696	Illumina HiSeq 2000 paired end sequencing of SAMD00152466	1464434200.0	7322171.0	DRR162518	0:100 1:100	A:400972247;C:330316514;G:329635959;T:403435022;N:74458	100	100	400972247	330316514	329635959	403435022	74458	DRX153137	DRS083198	DRA007711	UT-AQUA\|Laboratory of Aquatic Molecular Biology and Biotechnology	Department of Aquatic Bioscience, Graduate School of Agriculture and Life Sciences, The University of Tokyo	2	0.94169	0.93517	0.075	0.07408	0.78541	0.78796	0.56483	0.56426	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	cdna_unspecified	trueseq	bulk	unknown	unknown	Japan	2018-12-24	Juvenile	Juvenile	Liver	Liver and Biliary System

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CREATE TABLE run_metadata("run.accession" VARCHAR, "experiment.accession" VARCHAR, "sample.accession" VARCHAR, "study.accession" VARCHAR, bioproject VARCHAR, "study.title" VARCHAR, "study.alias" VARCHAR, "study.type" VARCHAR, "study.abstract" VARCHAR, "study.attributes" VARCHAR, "study.PMIDs" VARCHAR, "sample.description" VARCHAR, "sample.title" VARCHAR, "sample.alias" VARCHAR, "sample.centername" VARCHAR, "sample.attributes" VARCHAR, "GEOsample.title" VARCHAR, "GEOsample.dataprocessing" VARCHAR, "GEOsample.source" VARCHAR, "GEOsample.treatmentprotocol" VARCHAR, "GEOsample.extractprotocol" VARCHAR, "GEOsample.growthprotocol" VARCHAR, "GEOsample.characteristics" VARCHAR, "GEOsample.accession" VARCHAR, "experiment.title" VARCHAR, "experiment.alias" VARCHAR, "experiment.library_name" VARCHAR, "experiment.design_description" VARCHAR, "experiment.library_construction_protocol" VARCHAR, "experiment.attributes" VARCHAR, "experiment.library_strategy" VARCHAR, "experiment.library_source" VARCHAR, "experiment.library_selection" VARCHAR, "experiment.library_layout" VARCHAR, "experiment.platform" VARCHAR, "experiment.instrument_model" VARCHAR, "experiment.spot_descriptor" VARCHAR, "experiment.study_ref" VARCHAR, "run.title" VARCHAR, "run.attributes" VARCHAR, "run.filename" VARCHAR, "run.semantic_name" VARCHAR, "run.total_bases" DOUBLE, "run.total_spots" DOUBLE, "run.alias" VARCHAR, "run.read_lengths" VARCHAR, "run.base_counts" VARCHAR, "run.r1_length" BIGINT, "run.r2_length" BIGINT, "run.r3_length" BIGINT, "run.r4_length" BIGINT, "run.Acount" BIGINT, "run.Ccount" BIGINT, "run.Gcount" BIGINT, "run.Tcount" BIGINT, "run.Ncount" BIGINT, "run.experiment" VARCHAR, "run.pool_member" VARCHAR, "submission.accession" VARCHAR, "submission.srasource" VARCHAR, "submission.bioprojectsource" VARCHAR, "seqdetective.n_mates" BIGINT, "seqdetective.mapping_rate.mate1" DOUBLE, "seqdetective.mapping_rate.mate2" DOUBLE, "seqdetective.nofeature_rate.mate1" DOUBLE, "seqdetective.nofeature_rate.mate2" DOUBLE, "seqdetective.sparsity.mate1" DOUBLE, "seqdetective.sparsity.mate2" DOUBLE, "seqdetective.pos_strand_rate.mate1" DOUBLE, "seqdetective.pos_strand_rate.mate2" DOUBLE, "seqdetective.readlen.mate1" BIGINT, "seqdetective.readlen.mate2" BIGINT, "seqdetective.judgement.mate1" VARCHAR, "seqdetective.judgement.mate2" VARCHAR, "seqdetective.judgement.reason" VARCHAR, platform_family VARCHAR, instrument_generation VARCHAR, read_bias VARCHAR, selection_class VARCHAR, prep_kit VARCHAR, sc_or_bulk VARCHAR, tech_class VARCHAR, technology VARCHAR, tech_variant VARCHAR, "submission.bioprojectsource.country" VARCHAR, earliest_date DATE, devstage_curation VARCHAR, devstage_curation_coarse VARCHAR, tissue_curation VARCHAR, tissue_curation_coarse VARCHAR);;
CREATE INDEX idx_run_bioproject ON run_metadata(bioproject);;
CREATE INDEX idx_run_run_accession ON run_metadata("run.accession");;