metadata: run_metadata: 60 rows where experiment.library_selection = "RANDOM PCR" and experiment.platform = "BGISEQ"

60 rows where experiment.library_selection = "RANDOM PCR" and experiment.platform = "BGISEQ"

descending

Link	rowid ▼	run.accession	experiment.accession	sample.accession	study.accession	bioproject	study.title	study.alias	study.type	study.abstract	sample.title	sample.alias	sample.attributes	experiment.title	experiment.alias	experiment.library_name	experiment.design_description	experiment.library_strategy	experiment.library_source	experiment.library_selection	experiment.library_layout	experiment.platform	experiment.instrument_model	experiment.study_ref	run.attributes	run.filename	run.semantic_name	run.total_bases	run.total_spots	run.alias	run.read_lengths	run.base_counts	run.r1_length	run.r2_length	run.Acount	run.Ccount	run.Gcount	run.Tcount	run.Ncount	run.experiment	run.pool_member	submission.accession	submission.srasource	submission.bioprojectsource	seqdetective.n_mates	seqdetective.mapping_rate.mate1	seqdetective.nofeature_rate.mate1	seqdetective.sparsity.mate1	seqdetective.pos_strand_rate.mate1	seqdetective.readlen.mate1	seqdetective.judgement.mate1	seqdetective.judgement.reason	platform_family	instrument_generation	read_bias	selection_class	prep_kit	sc_or_bulk	tech_class	technology	submission.bioprojectsource.country	earliest_date	devstage_curation	devstage_curation_coarse	tissue_curation	tissue_curation_coarse
55655	55655	SRR10674410	SRX7351703	SRS5811186	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 100 1	isolate:biologocal replicate 10\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050110	bps050110	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_100_1_1.fq.gz BPS_100_1_2.fq.gz	fastq fastq	6958801200.0	69588012.0	BPS 100 1 1.fq.gz	0:100 1:100	A:1852139865;C:1635606671;G:1596180575;T:1874072794;N:801295	100	100	1852139865	1635606671	1596180575	1874072794	801295	SRX7351703	SRS5811186	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94716	0.09824	0.68475	0.47195	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55656	55656	SRR10674411	SRX7351702	SRS5811185	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 10 3	isolate:biologocal replicate 9\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050109	bps050109	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_10_3_1.fq.gz BPS_10_3_2.fq.gz	fastq fastq	6969574800.0	69695748.0	BPS 10 3 1.fq.gz	0:100 1:100	A:1860393053;C:1631995190;G:1597357772;T:1879188120;N:640665	100	100	1860393053	1631995190	1597357772	1879188120	640665	SRX7351702	SRS5811185	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94597	0.10542	0.68016	0.4666	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55657	55657	SRR10674412	SRX7351701	SRS5811182	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 10 2	isolate:biologocal replicate 8\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050108	bps050108	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_10_2_1.fq.gz BPS_10_2_2.fq.gz	fastq fastq	6709340400.0	67093404.0	BPS 10 2 1.fq.gz	0:100 1:100	A:2036224090;C:1319652145;G:1297564214;T:2055258677;N:641274	100	100	2036224090	1319652145	1297564214	2055258677	641274	SRX7351701	SRS5811182	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.87778	0.38111	0.71543	0.56061	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55658	55658	SRR10674413	SRX7351700	SRS5811181	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 10 1	isolate:biologocal replicate 7\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050107	bps050107	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_10_1_1.fq.gz BPS_10_1_2.fq.gz	fastq fastq	6717746800.0	67177468.0	BPS 10 1 1.fq.gz	0:100 1:100	A:1787637885;C:1578942212;G:1548400030;T:1802147201;N:619472	100	100	1787637885	1578942212	1548400030	1802147201	619472	SRX7351700	SRS5811181	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94726	0.10123	0.68919	0.45234	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55659	55659	SRR10674414	SRX7351699	SRS5811184	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 1 3	isolate:biologocal replicate 6\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050106	bps050106	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_1_3_2.fq.gz BPS_1_3_1.fq.gz	fastq fastq	6726522800.0	67265228.0	BPS 1 3 1.fq.gz	0:100 1:100	A:1789486049;C:1582069064;G:1548432478;T:1805913744;N:621465	100	100	1789486049	1582069064	1548432478	1805913744	621465	SRX7351699	SRS5811184	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.9465	0.09858	0.68442	0.45032	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55660	55660	SRR10674415	SRX7351698	SRS5811180	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 1 2	isolate:biologocal replicate 5\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050105	bps050105	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_1_2_2.fq.gz BPS_1_2_1.fq.gz	fastq fastq	6959685000.0	69596850.0	BPS 1 2 1.fq.gz	0:100 1:100	A:1914426129;C:1574998719;G:1542052351;T:1927550147;N:657654	100	100	1914426129	1574998719	1542052351	1927550147	657654	SRX7351698	SRS5811180	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94034	0.14574	0.69934	0.47033	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55661	55661	SRR10674416	SRX7351697	SRS5811183	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 1 1	isolate:biologocal replicate 4\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050104	bps050104	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_1_1_1.fq.gz BPS_1_1_2.fq.gz	fastq fastq	7040826400.0	70408264.0	BPS 1 1 1.fq.gz	0:100 1:100	A:1915125100;C:1612334047;G:1578924466;T:1933922418;N:520369	100	100	1915125100	1612334047	1578924466	1933922418	520369	SRX7351697	SRS5811183	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94114	0.13158	0.68903	0.47739	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55662	55662	SRR10674417	SRX7351696	SRS5811179	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 0 1 3	isolate:biologocal replicate 3\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050103	bps050103	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_0_1_3_1.fq.gz BPS_0_1_3_2.fq.gz	fastq fastq	6992676800.0	69926768.0	BPS 0 1 3 1.fq.gz	0:100 1:100	A:1860627581;C:1643489002;G:1610508221;T:1877536968;N:515028	100	100	1860627581	1643489002	1610508221	1877536968	515028	SRX7351696	SRS5811179	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94485	0.101	0.68314	0.45711	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55663	55663	SRR10674418	SRX7351695	SRS5811178	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		Cntrol3	isolate:biologocal replicate 18\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050118	bps050118	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		Cntrol3_1.fq.gz Cntrol3_2.fq.gz	fastq fastq	6742983200.0	67429832.0	Cntrol3 1.fq.gz	0:100 1:100	A:1801392073;C:1577630219;G:1545614005;T:1817857809;N:489094	100	100	1801392073	1577630219	1545614005	1817857809	489094	SRX7351695	SRS5811178	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94386	0.10779	0.68832	0.45545	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55664	55664	SRR10674419	SRX7351694	SRS5811177	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		Cntrol2	isolate:biologocal replicate 17\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050117	bps050117	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		Cntrol2_1.fq.gz Cntrol2_2.fq.gz	fastq fastq	6750661000.0	67506610.0	Cntrol2 1.fq.gz	0:100 1:100	A:1796606666;C:1585909518;G:1556014239;T:1811284557;N:846020	100	100	1796606666	1585909518	1556014239	1811284557	846020	SRX7351694	SRS5811177	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94397	0.10007	0.68708	0.47779	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55665	55665	SRR10674420	SRX7351693	SRS5811174	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		Cntrol1	isolate:biologocal replicate 16\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050116	bps050116	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		Cntrol1_1.fq.gz Cntrol1_2.fq.gz	fastq fastq	6766663000.0	67666630.0	Cntrol1 1.fq.gz	0:100 1:100	A:1825736389;C:1564390057;G:1532835305;T:1842876742;N:824507	100	100	1825736389	1564390057	1532835305	1842876742	824507	SRX7351693	SRS5811174	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94047	0.12338	0.68893	0.46407	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55666	55666	SRR10674421	SRX7351692	SRS5811176	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 1000 3	isolate:biologocal replicate 15\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050115	bps050115	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_1000_3_1.fq.gz BPS_1000_3_2.fq.gz	fastq fastq	6507622200.0	65076222.0	BPS 1000 3 1.fq.gz	0:100 1:100	A:1735402948;C:1525938362;G:1493787016;T:1751945676;N:548198	100	100	1735402948	1525938362	1493787016	1751945676	548198	SRX7351692	SRS5811176	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94304	0.10593	0.6842	0.46348	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55667	55667	SRR10674422	SRX7351691	SRS5811173	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 1000 2	isolate:biologocal replicate 14\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050114	bps050114	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_1000_2_1.fq.gz BPS_1000_2_2.fq.gz	fastq fastq	6740712000.0	67407120.0	BPS 1000 2 1.fq.gz	0:100 1:100	A:1816870993;C:1562402111;G:1527381283;T:1833284067;N:773546	100	100	1816870993	1562402111	1527381283	1833284067	773546	SRX7351691	SRS5811173	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94327	0.11511	0.70033	0.4551	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55668	55668	SRR10674423	SRX7351690	SRS5811175	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 1000 1	isolate:biologocal replicate 13\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050113	bps050113	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_1000_1_1.fq.gz BPS_1000_1_2.fq.gz	fastq fastq	6727750400.0	67277504.0	BPS 1000 1 1.fq.gz	0:100 1:100	A:1803578734;C:1568712705;G:1535618959;T:1819016739;N:823263	100	100	1803578734	1568712705	1535618959	1819016739	823263	SRX7351690	SRS5811175	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94457	0.1118	0.69087	0.46815	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55669	55669	SRR10674424	SRX7351689	SRS5811172	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 100 3	isolate:biologocal replicate 12\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050112	bps050112	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_100_3_1.fq.gz BPS_100_3_2.fq.gz	fastq fastq	6962431800.0	69624318.0	BPS 100 3 1.fq.gz	0:100 1:100	A:1865300693;C:1624120289;G:1585691091;T:1886538935;N:780792	100	100	1865300693	1624120289	1585691091	1886538935	780792	SRX7351689	SRS5811172	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94581	0.10195	0.68288	0.47174	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55670	55670	SRR10674425	SRX7351688	SRS5811171	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 100 2	isolate:biologocal replicate 11\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050111	bps050111	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_100_2_1.fq.gz BPS_100_2_2.fq.gz	fastq fastq	7201035800.0	72010358.0	BPS 100 2 1.fq.gz	0:100 1:100	A:2115590854;C:1489181336;G:1459936470;T:2135514629;N:812511	100	100	2115590854	1489181336	1459936470	2135514629	812511	SRX7351688	SRS5811171	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.90678	0.29289	0.70735	0.49554	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55671	55671	SRR10674426	SRX7351687	SRS5811170	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 0 1 2	isolate:biologocal replicate 2\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050102	bps050102	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_0_1_2_1.fq.gz BPS_0_1_2_2.fq.gz	fastq fastq	7022382800.0	70223828.0	BPS 0 1 2 1.fq.gz	0:100 1:100	A:1853514579;C:1663935080;G:1635277415;T:1869136960;N:518766	100	100	1853514579	1663935080	1635277415	1869136960	518766	SRX7351687	SRS5811170	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94712	0.09313	0.6814	0.47256	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
55672	55672	SRR10674427	SRX7351686	SRS5811167	SRP237283	PRJNA595113	Transcriptomic responses of Bisphenol S on zebrafish	PRJNA595113	Other	To better understand the multiple interacting molecular mechanisms that are altered during BPS exposure global transcriptome sequencing RNA Seq was performed in embryonic fish to quantify expression levels of transcripts with a high sensitivity and broad genome coverage post BPS treatment19. To better understand sensitivities of fish to BPS toxicity and the mechanisms that regulate expression of transcripts altered by BPS exposure we evaluated morphological and transcriptional effects in using environmentally relevant concentrations.		BPS 0 1 1	isolate:biologocal replicate 1\|age:120hpf\|sex:not collected\|tissue:embryo\|collection date:2018 05 01\|geo loc name:China:Guangdong\|BioSampleModel:Model organism or animal	Transcriptomic responses of Bisphenol S	bps050101	bps050101	An Agilent 2100 bioanalyzer chip was used to determine RNA integrity score Agilent Santa Clara CA USA with only high quality RNA samples 28 S:18 S=2.02.2 RIN>9.0 used to construct libraries following a standardized procedure at the Beijing Genome Institute BGI; Shenzhen China . The libraries were sequenced at the Beijing Genomics Institute BGI Shenzhen China on a BGISEQ500 platform with 50 bp single end reads under three replicates per treatment group.	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP237283		BPS_0_1_1_1.fq.gz BPS_0_1_1_2.fq.gz	fastq fastq	7013900400.0	70139004.0	BPS 0 1 1 1.fq.gz	0:100 1:100	A:1885826391;C:1629114228;G:1597181244;T:1901261511;N:517026	100	100	1885826391	1629114228	1597181244	1901261511	517026	SRX7351686	SRS5811167	SRA1010884	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.94226	0.11616	0.69014	0.45679	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2019-12-12	Larval	Larval	Embryo Imprecise	All anatomical structures
58533	58533	SRR11355387	SRX7957249	SRS6343356	SRP253408	PRJNA613558	Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture	PRJNA613558	Other	As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study combined with antibiotics bioaccumulated in ovary we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish and thus affect egg production and survival. Therefore ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0 1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.	C2 3	C2 3	strain:AB\|isolate:C2\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:female\|tissue:ovary\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|replicate:biological replicate 3\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C2 320200327	C2 320200327	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP253408		C2_3_1.fq.gz C2_3_2.fq.gz	fastq fastq	6857650800.0	45717672.0	C2 3 1.fq.gz	0:150 1:150	A:1826466263;C:1599272942;G:1580689630;T:1851144875;N:77090	150	150	1826466263	1599272942	1580689630	1851144875	77090	SRX7957249	SRS6343356	SRA1056819	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93222	0.02854	0.75138	0.50759	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-03-20	Undetermined	Adult	Gonad	Reproductive System
58534	58534	SRR11355388	SRX7957248	SRS6343355	SRP253408	PRJNA613558	Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture	PRJNA613558	Other	As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study combined with antibiotics bioaccumulated in ovary we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish and thus affect egg production and survival. Therefore ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0 1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.	C2 2	C2 2	strain:AB\|isolate:C2\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:female\|tissue:ovary\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|replicate:biological replicate 2\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C2 220200326	C2 220200326	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP253408		C2_2_1.fq.gz C2_2_2.fq.gz	fastq fastq	6859954800.0	45733032.0	C2 2 1.fq.gz	0:150 1:150	A:1836618967;C:1591135182;G:1572318102;T:1859806048;N:76501	150	150	1836618967	1591135182	1572318102	1859806048	76501	SRX7957248	SRS6343355	SRA1056819	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93237	0.03248	0.74663	0.5081	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-03-20	Undetermined	Adult	Gonad	Reproductive System
58535	58535	SRR11355389	SRX7957247	SRS6343354	SRP253408	PRJNA613558	Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture	PRJNA613558	Other	As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study combined with antibiotics bioaccumulated in ovary we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish and thus affect egg production and survival. Therefore ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0 1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.	C2 1	C2 1	strain:AB\|isolate:C2\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:female\|tissue:ovary\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|replicate:biological replicate 1\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C2 120200325	C2 120200325	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP253408		C2_1_1.fq.gz C2_1_2.fq.gz	fastq fastq	6618974400.0	44126496.0	C2 1 1.fq.gz	0:150 1:150	A:1774116288;C:1533828286;G:1511526952;T:1799423408;N:79466	150	150	1774116288	1533828286	1511526952	1799423408	79466	SRX7957247	SRS6343354	SRA1056819	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.9326	0.02973	0.75426	0.50678	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-03-20	Undetermined	Adult	Gonad	Reproductive System
58536	58536	SRR11355390	SRX7957246	SRS6343353	SRP253408	PRJNA613558	Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture	PRJNA613558	Other	As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study combined with antibiotics bioaccumulated in ovary we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish and thus affect egg production and survival. Therefore ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0 1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.	C1 3	C1 3	strain:AB\|isolate:C1\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:female\|tissue:ovary\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|replicate:biological replicate 3\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C1 320200324	C1 320200324	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP253408		C1_3_1.fq.gz C1_3_2.fq.gz	fastq fastq	6837729600.0	45584864.0	C1 3 1.fq.gz	0:150 1:150	A:1831266308;C:1587032733;G:1565071069;T:1853950421;N:409069	150	150	1831266308	1587032733	1565071069	1853950421	409069	SRX7957246	SRS6343353	SRA1056819	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93541	0.03212	0.74681	0.50268	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-03-20	Undetermined	Adult	Gonad	Reproductive System
58537	58537	SRR11355391	SRX7957245	SRS6343352	SRP253408	PRJNA613558	Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture	PRJNA613558	Other	As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study combined with antibiotics bioaccumulated in ovary we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish and thus affect egg production and survival. Therefore ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0 1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.	C1 2	C1 2	strain:AB\|isolate:C1\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:female\|tissue:ovary\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|replicate:biological replicate 2\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C1 220200323	C1 220200323	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP253408		C1_2_2.fq.gz C1_2_1.fq.gz	fastq fastq	6860328000.0	45735520.0	C1 2 1.fq.gz	0:150 1:150	A:1838176072;C:1591277709;G:1569605888;T:1861063734;N:204597	150	150	1838176072	1591277709	1569605888	1861063734	204597	SRX7957245	SRS6343352	SRA1056819	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93763	0.033	0.74617	0.50287	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-03-20	Undetermined	Adult	Gonad	Reproductive System
58538	58538	SRR11355392	SRX7957244	SRS6343351	SRP253408	PRJNA613558	Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture	PRJNA613558	Other	As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study combined with antibiotics bioaccumulated in ovary we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish and thus affect egg production and survival. Therefore ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0 1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.	C1 1	C1 1	strain:AB\|isolate:C1\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:female\|tissue:ovary\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|replicate:biological replicate 1\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C1 120200322	C1 120200322	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP253408		C1_1_1.fq.gz C1_1_2.fq.gz	fastq fastq	6865547700.0	45770318.0	C1 1 1.fq.gz	0:150 1:150	A:1841774713;C:1591288582;G:1570400871;T:1861867728;N:215806	150	150	1841774713	1591288582	1570400871	1861867728	215806	SRX7957244	SRS6343351	SRA1056819	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93567	0.03152	0.74653	0.50239	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-03-20	Undetermined	Adult	Gonad	Reproductive System
58539	58539	SRR11355393	SRX7957243	SRS6343350	SRP253408	PRJNA613558	Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture	PRJNA613558	Other	As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study combined with antibiotics bioaccumulated in ovary we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish and thus affect egg production and survival. Therefore ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0 1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.	C0 3	C0 3	strain:AB\|isolate:C0\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:female\|tissue:ovary\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|replicate:biological replicate 3\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C0 320200321	C0 320200321	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP253408		C0_3_1.fq.gz C0_3_2.fq.gz	fastq fastq	6824622600.0	45497484.0	C0 3 1.fq.gz	0:150 1:150	A:1833660953;C:1578510104;G:1558095174;T:1854128169;N:228200	150	150	1833660953	1578510104	1558095174	1854128169	228200	SRX7957243	SRS6343350	SRA1056819	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93758	0.0323	0.75024	0.50852	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-03-20	Undetermined	Adult	Gonad	Reproductive System
58540	58540	SRR11355394	SRX7957242	SRS6343349	SRP253408	PRJNA613558	Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture	PRJNA613558	Other	As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study combined with antibiotics bioaccumulated in ovary we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish and thus affect egg production and survival. Therefore ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0 1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.	C0 2	C0 2	strain:AB\|isolate:C0\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:female\|tissue:ovary\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|replicate:biological replicate 2\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C0 220200320	C0 220200320	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP253408		C0_2_2.fq.gz C0_2_1.fq.gz	fastq fastq	6819326400.0	45462176.0	C0 2 1.fq.gz	0:150 1:150	A:1837661215;C:1571877614;G:1550458835;T:1859103408;N:225328	150	150	1837661215	1571877614	1550458835	1859103408	225328	SRX7957242	SRS6343349	SRA1056819	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93697	0.0339	0.74793	0.5035	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-03-20	Undetermined	Adult	Gonad	Reproductive System
58541	58541	SRR11355395	SRX7957241	SRS6343348	SRP253408	PRJNA613558	Transcriptomic assessments RNA sequencing in ovaries following treatments of gravid female zebrafish to an antibiotic mixture	PRJNA613558	Other	As the use of antimicrobials during pregnancy and the perinatal period may lead to adverse outcomes such as miscarriages and newborn disease the purpose of present study was to evaluate the influence of antibiotic exposure in offspring following treatments of gravid female zebrafish to an antibiotic mixture. For the F0 generation adult zebrafish AB strain at sexual maturity 150 dpf dpf were selected for experimentation 50% male and 50% pregnant female. Given a significant change occurred in eggs production and F1 survival at birth in present study combined with antibiotics bioaccumulated in ovary we suspect that antibiotic exposure might impact the ovary of F0 generation zebrafish and thus affect egg production and survival. Therefore ovaries of the F0 generation were evaluated for transcriptional effects in different antibiotics mixture exposure 0 1 and 100 ug/L using a HTS approach coupled with advanced bioinformatic tools.	C0 1	C0 1	strain:AB\|isolate:C0\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:female\|tissue:ovary\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|replicate:biological replicate 1\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C0 120200319	C0 120200319	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP253408		C0_1_1.fq.gz C0_1_2.fq.gz	fastq fastq	7030804800.0	46872032.0	C0 1 1.fq.gz	0:150 1:150	A:1891469955;C:1624531422;G:1603124564;T:1911444454;N:234405	150	150	1891469955	1624531422	1603124564	1911444454	234405	SRX7957241	SRS6343348	SRA1056819	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93519	0.0328	0.74602	0.48272	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-03-20	Undetermined	Adult	Gonad	Reproductive System
60445	60445	SRR12272862	SRX8777892	SRS7048444	SRP272672	PRJNA647444	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA	PRJNA647444	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C2	C2 C2 2 4	replicate:biological replicate 2\|strain:AB\|isolate:C2\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:100ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C2C220200712	C2C220200712	RNA seq of zebrafish in different conditions	miRNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP272672	loader:fastq load.py	C2_C2_2_4.fq	fastq	542610936.0	21965958.0	C2 C2 2 4.fq.gz	0:24.70	A:95221617;C:122628624;G:167025611;T:157730855;N:4229	24		95221617	122628624	167025611	157730855	4229	SRX8777892	SRS7048444	SRA1101037	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.8119	0.10745	0.85717	0.51338	22	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-08-05	Undetermined	Embryo	Whole Organism	All anatomical structures
60446	60446	SRR12272863	SRX8777891	SRS7048443	SRP272672	PRJNA647444	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA	PRJNA647444	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C2	C2 C2 1 4	replicate:biological replicate 1\|strain:AB\|isolate:C2\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:100ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C2C220200711	C2C220200711	RNA seq of zebrafish in different conditions	miRNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP272672	loader:fastq load.py	C2_C2_1_4.fq	fastq	542847476.0	22614181.0	C2 C2 1 4.fq.gz	0:24.00	A:99999101;C:125407906;G:162383758;T:155055099;N:1612	24		99999101	125407906	162383758	155055099	1612	SRX8777891	SRS7048443	SRA1101037	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.84327	0.10491	0.83256	0.52046	19	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-08-05	Undetermined	Embryo	Whole Organism	All anatomical structures
60447	60447	SRR12272864	SRX8777890	SRS7048442	SRP272672	PRJNA647444	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA	PRJNA647444	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C1	C1 C1 2 4	replicate:biological replicate 2\|strain:AB\|isolate:C1\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:1ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C1C120200712	C1C120200712	RNA seq of zebrafish in different conditions	miRNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP272672	loader:fastq load.py	C1_C1_2_4.fq	fastq	570918284.0	22577002.0	C1 C1 2 4.fq.gz	0:25.29	A:100121235;C:130480588;G:178656113;T:161652765;N:7583	25		100121235	130480588	178656113	161652765	7583	SRX8777890	SRS7048442	SRA1101037	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.85096	0.12542	0.82873	0.51535	22	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-08-05	Undetermined	Embryo	Whole Organism	All anatomical structures
60448	60448	SRR12272865	SRX8777889	SRS7048441	SRP272672	PRJNA647444	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA	PRJNA647444	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C1	C1 C1 1 4	replicate:biological replicate 1\|strain:AB\|isolate:C1\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:1ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C1C120200711	C1C120200711	RNA seq of zebrafish in different conditions	miRNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP272672	loader:fastq load.py	C1_C1_1_4.fq	fastq	545089417.0	22812164.0	C1 C1 1 4.fq.gz	0:23.89	A:99851844;C:125314095;G:166401335;T:153521167;N:976	23		99851844	125314095	166401335	153521167	976	SRX8777889	SRS7048441	SRA1101037	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.84602	0.11725	0.83159	0.51353	19	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-08-05	Undetermined	Embryo	Whole Organism	All anatomical structures
60449	60449	SRR12272866	SRX8777888	SRS7048440	SRP272672	PRJNA647444	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA	PRJNA647444	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C0	C0 C0 2 4	replicate:biological replicate 2\|strain:AB\|isolate:C0\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:0ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C0C020200712	C0C020200712	RNA seq of zebrafish in different conditions	miRNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP272672	loader:fastq load.py	C0_C0_2_4.fq	fastq	527443144.0	23174740.0	C0 C0 2 4.fq.gz	0:22.76	A:102368401;C:120843229;G:151690193;T:152540806;N:515	22		102368401	120843229	151690193	152540806	515	SRX8777888	SRS7048440	SRA1101037	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.83063	0.08114	0.85169	0.50894	16	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-08-05	Undetermined	Embryo	Whole Organism	All anatomical structures
60450	60450	SRR12272867	SRX8777887	SRS7048439	SRP272672	PRJNA647444	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemiRNA	PRJNA647444	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C0	C0 C0 1 4	replicate:biological replicate 1\|strain:AB\|isolate:C0\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:0ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C0C020200711	C0C020200711	RNA seq of zebrafish in different conditions	miRNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP272672	loader:fastq load.py	C0_C0_1_4.fq	fastq	511759408.0	22673361.0	C0 C0 1 4.fq.gz	0:22.57	A:100879182;C:120237907;G:142799495;T:147842595;N:229	22		100879182	120237907	142799495	147842595	229	SRX8777887	SRS7048439	SRA1101037	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.83904	0.0823	0.84741	0.49929	22	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-08-05	Undetermined	Embryo	Whole Organism	All anatomical structures
60496	60496	SRR12328853	SRX8829078	SRS7048444	SRP273655	PRJNA648800	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA	PRJNA648800	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C2	C2 C2 2 4	replicate:biological replicate 2\|strain:AB\|isolate:C2\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:100ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C2C220200712	C2C220200712	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP273655		C2_C2_2_4_1.fq.gz C2_C2_2_4_2.fq.gz	fastq fastq	6974294600.0	69742946.0	C2 C2 2 4 1.fq.gz	0:100 1:100	A:2057162032;C:1418016219;G:1425580374;T:2073535975;N:0	100	100	2057162032	1418016219	1425580374	2073535975	0	SRX8829078	SRS7048444	SRA1103962	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93171	0.17455	0.71626	0.54961	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-07-27	Undetermined	Embryo	Whole Organism	All anatomical structures
60497	60497	SRR12328854	SRX8829077	SRS7048443	SRP273655	PRJNA648800	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA	PRJNA648800	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C2	C2 C2 1 4	replicate:biological replicate 1\|strain:AB\|isolate:C2\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:100ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C2C220200711	C2C220200711	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP273655		C2_C2_1_4_2.fq.gz C2_C2_1_4_1.fq.gz	fastq fastq	6942905200.0	69429052.0	C2 C2 1 4 1.fq.gz	0:100 1:100	A:2025129308;C:1433430820;G:1434784226;T:2049560846;N:0	100	100	2025129308	1433430820	1434784226	2049560846	0	SRX8829077	SRS7048443	SRA1103962	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93211	0.16662	0.71001	0.53674	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-07-27	Undetermined	Embryo	Whole Organism	All anatomical structures
60498	60498	SRR12328855	SRX8829076	SRS7048442	SRP273655	PRJNA648800	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA	PRJNA648800	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C1	C1 C1 2 4	replicate:biological replicate 2\|strain:AB\|isolate:C1\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:1ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C1C120200712	C1C120200712	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP273655		C1_C1_2_4_1.fq.gz C1_C1_2_4_2.fq.gz	fastq fastq	6973657600.0	69736576.0	C1 C1 2 4 1.fq.gz	0:100 1:100	A:2050440259;C:1423350359;G:1423015668;T:2076851314;N:0	100	100	2050440259	1423350359	1423015668	2076851314	0	SRX8829076	SRS7048442	SRA1103962	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.92911	0.1877	0.72025	0.58085	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-07-27	Undetermined	Embryo	Whole Organism	All anatomical structures
60499	60499	SRR12328856	SRX8829075	SRS7048441	SRP273655	PRJNA648800	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA	PRJNA648800	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C1	C1 C1 1 4	replicate:biological replicate 1\|strain:AB\|isolate:C1\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:1ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C1C120200711	C1C120200711	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP273655		C1_C1_1_4_1.fq.gz C1_C1_1_4_2.fq.gz	fastq fastq	6746729200.0	67467292.0	C1 C1 1 4 1.fq.gz	0:100 1:100	A:2004203843;C:1356765594;G:1357760526;T:2027999237;N:0	100	100	2004203843	1356765594	1357760526	2027999237	0	SRX8829075	SRS7048441	SRA1103962	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.92733	0.19903	0.72228	0.59259	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-07-27	Undetermined	Embryo	Whole Organism	All anatomical structures
60500	60500	SRR12328857	SRX8829074	SRS7048440	SRP273655	PRJNA648800	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA	PRJNA648800	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C0	C0 C0 2 4	replicate:biological replicate 2\|strain:AB\|isolate:C0\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:0ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C0C020200712	C0C020200712	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP273655		C0_C0_2_4_1.fq.gz C0_C0_2_4_2.fq.gz	fastq fastq	6924724800.0	69247248.0	C0 C0 2 4 1.fq.gz	0:100 1:100	A:1974618038;C:1471821932;G:1482725702;T:1995559128;N:0	100	100	1974618038	1471821932	1482725702	1995559128	0	SRX8829074	SRS7048440	SRA1103962	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93473	0.14676	0.69649	0.50413	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-07-27	Undetermined	Embryo	Whole Organism	All anatomical structures
60501	60501	SRR12328858	SRX8829073	SRS7048439	SRP273655	PRJNA648800	mRNA and miRNA Seq in offspring post parental exposure to an antibiotic mixturemRNA	PRJNA648800	Other	Zebrafish embryos were exposed to environmentally relevant levels 1 and 100 ug/L of antibiotic mixtures 15 of the most commonly detected antibiotics for 150 days until sexual maturation. miRNA mRNA network analysis in offspring post parental exposure to an antibiotic mixture.	C0	C0 C0 1 4	replicate:biological replicate 1\|strain:AB\|isolate:C0\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:not applicable\|dev stage:not applicable\|sex:pooled male and female\|tissue:the whole\|collection date:2019 11 01\|geo loc name:China: Shenzhen Guangdong\|phenotype:0ug/L\|BioSampleModel:Model organism or animal	RNA seq of zebrafish	C0C020200711	C0C020200711	RNA seq of zebrafish in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP273655		C0_C0_1_4_1.fq.gz C0_C0_1_4_2.fq.gz	fastq fastq	6899505600.0	68995056.0	C0 C0 1 4 1.fq.gz	0:100 1:100	A:1957459931;C:1477351919;G:1482435319;T:1982258431;N:0	100	100	1957459931	1477351919	1482435319	1982258431	0	SRX8829073	SRS7048439	SRA1103962	Southern University of Science and Technology\|School of Environmental Science and Engineering	Southern University of Science and Technology	1	0.93567	0.14057	0.6883	0.48707	100	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-07-27	Undetermined	Embryo	Whole Organism	All anatomical structures
71549	71549	SRR21700247	SRX17697774	SRS15228561	SRP399479	PRJNA884084	RNA Seq data of gmfg morphants and their control siblings	PRJNA884084	Other	To more specifically explore the underlying mechanism by which gmfg regulates HSPC initiation we performed RNA sequencing RNA Seq with the dissected trunk and tail from 26 hpf gmfg morphants and their control siblings.	biological replicate 3	gmfg atgMO 3	strain:not applicable\|isolate:not applicable\|dev stage:26 hpf\|sex:not applicable\|tissue:the dissected trunk and tail\|collection date:2021 02 26\|geo loc name:China:Shenzhen Guangdong\|sample type:mo3\|BioSampleModel:Model organism or animal	RNA seq of Danio rerio	MO3 20210214	MO3 20210214	RNA seq of Danio rerio in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP399479		MO_3_1.fq.gz	fastq	1194263900.0	23885278.0	MO 3 1.fq.gz	0:50 1:0	A:315714579;C:274130504;G:282488713;T:321930104;N:0	50	0	315714579	274130504	282488713	321930104	0	SRX17697774	SRS15228561	SRA1506658	the First Affiliated Hospital, School of Medicine, Zhejiang University\|BoneMarrow Transplantation Center	the First Affiliated Hospital, School of Medicine, Zhejiang University	1	0.9415	0.07261	0.70701	0.47029	50	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-09-25	Pharyngula	Embryo	Multi-tissue	Multi-system
71550	71550	SRR21700248	SRX17697773	SRS15228560	SRP399479	PRJNA884084	RNA Seq data of gmfg morphants and their control siblings	PRJNA884084	Other	To more specifically explore the underlying mechanism by which gmfg regulates HSPC initiation we performed RNA sequencing RNA Seq with the dissected trunk and tail from 26 hpf gmfg morphants and their control siblings.	biological replicate 2	gmfg atgMO 2	strain:not applicable\|isolate:not applicable\|dev stage:26 hpf\|sex:not applicable\|tissue:the dissected trunk and tail\|collection date:2021 02 26\|geo loc name:China:Shenzhen Guangdong\|sample type:mo2\|BioSampleModel:Model organism or animal	RNA seq of Danio rerio	MO2 20210213	MO2 20210213	RNA seq of Danio rerio in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP399479		MO_2_1.fq.gz	fastq	1193697300.0	23873946.0	MO 2 1.fq.gz	0:50 1:0	A:316188077;C:272941933;G:282559962;T:322007328;N:0	50	0	316188077	272941933	282559962	322007328	0	SRX17697773	SRS15228560	SRA1506658	the First Affiliated Hospital, School of Medicine, Zhejiang University\|BoneMarrow Transplantation Center	the First Affiliated Hospital, School of Medicine, Zhejiang University	1	0.94144	0.07426	0.70715	0.47856	50	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-09-25	Pharyngula	Embryo	Multi-tissue	Multi-system
71551	71551	SRR21700249	SRX17697772	SRS15228559	SRP399479	PRJNA884084	RNA Seq data of gmfg morphants and their control siblings	PRJNA884084	Other	To more specifically explore the underlying mechanism by which gmfg regulates HSPC initiation we performed RNA sequencing RNA Seq with the dissected trunk and tail from 26 hpf gmfg morphants and their control siblings.	biological replicate 1	gmfg atgMO 1	strain:not applicable\|isolate:not applicable\|dev stage:26 hpf\|sex:not applicable\|tissue:the dissected trunk and tail\|collection date:2021 02 26\|geo loc name:China:Shenzhen Guangdong\|sample type:mo1\|BioSampleModel:Model organism or animal	RNA seq of Danio rerio	MO1 20210212	MO1 20210212	RNA seq of Danio rerio in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP399479		MO_1_1.fq.gz	fastq	1194311300.0	23886226.0	MO 1 1.fq.gz	0:50 1:0	A:317344841;C:272348188;G:281111904;T:323506367;N:0	50	0	317344841	272348188	281111904	323506367	0	SRX17697772	SRS15228559	SRA1506658	the First Affiliated Hospital, School of Medicine, Zhejiang University\|BoneMarrow Transplantation Center	the First Affiliated Hospital, School of Medicine, Zhejiang University	1	0.94366	0.07701	0.70274	0.47929	50	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-09-25	Pharyngula	Embryo	Multi-tissue	Multi-system
71552	71552	SRR21700250	SRX17697771	SRS15228558	SRP399479	PRJNA884084	RNA Seq data of gmfg morphants and their control siblings	PRJNA884084	Other	To more specifically explore the underlying mechanism by which gmfg regulates HSPC initiation we performed RNA sequencing RNA Seq with the dissected trunk and tail from 26 hpf gmfg morphants and their control siblings.	biological replicate 3	ctl 3	strain:not applicable\|isolate:not applicable\|dev stage:26 hpf\|sex:not applicable\|tissue:the dissected trunk and tail\|collection date:2021 02 26\|geo loc name:China:Shenzhen Guangdong\|sample type:ctl3\|BioSampleModel:Model organism or animal	RNA seq of Danio rerio	ctl3 20210211	ctl3 20210211	RNA seq of Danio rerio in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP399479		ctl_3_1.fq.gz	fastq	1190502850.0	23810057.0	ctl 3 1.fq.gz	0:50 1:0	A:314168919;C:272277792;G:283249731;T:320806408;N:0	50	0	314168919	272277792	283249731	320806408	0	SRX17697771	SRS15228558	SRA1506658	the First Affiliated Hospital, School of Medicine, Zhejiang University\|BoneMarrow Transplantation Center	the First Affiliated Hospital, School of Medicine, Zhejiang University	1	0.94354	0.08493	0.70228	0.48147	50	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-09-25	Pharyngula	Embryo	Multi-tissue	Multi-system
71553	71553	SRR21700251	SRX17697770	SRS15228557	SRP399479	PRJNA884084	RNA Seq data of gmfg morphants and their control siblings	PRJNA884084	Other	To more specifically explore the underlying mechanism by which gmfg regulates HSPC initiation we performed RNA sequencing RNA Seq with the dissected trunk and tail from 26 hpf gmfg morphants and their control siblings.	biological replicate 2	ctl 2	strain:not applicable\|isolate:not applicable\|dev stage:26 hpf\|sex:not applicable\|tissue:the dissected trunk and tail\|collection date:2021 02 26\|geo loc name:China:Shenzhen Guangdong\|sample type:ctl2\|BioSampleModel:Model organism or animal	RNA seq of Danio rerio	ctl2 20210210	ctl2 20210210	RNA seq of Danio rerio in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP399479		ctl_2_1.fq.gz	fastq	1193941900.0	23878838.0	ctl 2 1.fq.gz	0:50 1:0	A:315521033;C:273947671;G:281554279;T:322918917;N:0	50	0	315521033	273947671	281554279	322918917	0	SRX17697770	SRS15228557	SRA1506658	the First Affiliated Hospital, School of Medicine, Zhejiang University\|BoneMarrow Transplantation Center	the First Affiliated Hospital, School of Medicine, Zhejiang University	1	0.94073	0.08514	0.70281	0.4767	50	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-09-25	Pharyngula	Embryo	Multi-tissue	Multi-system
71554	71554	SRR21700252	SRX17697769	SRS15228556	SRP399479	PRJNA884084	RNA Seq data of gmfg morphants and their control siblings	PRJNA884084	Other	To more specifically explore the underlying mechanism by which gmfg regulates HSPC initiation we performed RNA sequencing RNA Seq with the dissected trunk and tail from 26 hpf gmfg morphants and their control siblings.	biological replicate 1	ctl 1	strain:not applicable\|isolate:not applicable\|dev stage:26 hpf\|sex:not applicable\|tissue:the dissected trunk and tail\|collection date:2021 02 26\|geo loc name:China:Shenzhen Guangdong\|sample type:ctl1\|BioSampleModel:Model organism or animal	RNA seq of Danio rerio	ctl1 20210209	ctl1 20210209	RNA seq of Danio rerio in different conditions	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	SINGLE	BGISEQ	BGISEQ-500	SRP399479		ctl_1_1.fq.gz	fastq	1194196300.0	23883926.0	ctl 1 1.fq.gz	0:50 1:0	A:315050496;C:273915045;G:282252071;T:322978688;N:0	50	0	315050496	273915045	282252071	322978688	0	SRX17697769	SRS15228556	SRA1506658	the First Affiliated Hospital, School of Medicine, Zhejiang University\|BoneMarrow Transplantation Center	the First Affiliated Hospital, School of Medicine, Zhejiang University	1	0.94272	0.08675	0.70234	0.47397	50	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-09-25	Pharyngula	Embryo	Multi-tissue	Multi-system
71636	71636	SRR21869755	SRX17856945	SRS15377990	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		BHEE L 1	replicate:biological replicate 1\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 10\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221019	AT20221019	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		BHEE_L_1_1.fq.gz BHEE_L_1_2.fq.gz	fastq fastq	6801171000.0	45341140.0	BHEE L 1 1.fq.gz	0:150 1:150	A:1888974247;C:1508524578;G:1489908963;T:1913517780;N:245432	150	150	1888974247	1508524578	1489908963	1913517780	245432	SRX17856945	SRS15377990	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.9335	0.13981	0.68002	0.4788	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71637	71637	SRR21869756	SRX17856944	SRS15377989	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		TBBPA H 3	replicate:biological replicate 3\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 9\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221018	AT20221018	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		TBBPA_H_3_1.fq.gz TBBPA_H_3_2.fq.gz	fastq fastq	6951086400.0	46340576.0	TBBPA H 3 1.fq.gz	0:150 1:150	A:1880119007;C:1592162094;G:1577584281;T:1900616606;N:604412	150	150	1880119007	1592162094	1577584281	1900616606	604412	SRX17856944	SRS15377989	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.93943	0.10589	0.67689	0.47979	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71638	71638	SRR21869757	SRX17856943	SRS15377988	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		TBBPA H 2	replicate:biological replicate 2\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 8\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221017	AT20221017	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		TBBPA_H_2_2.fq.gz TBBPA_H_2_1.fq.gz	fastq fastq	6795391800.0	45302612.0	TBBPA H 2 1.fq.gz	0:150 1:150	A:1857631184;C:1537732087;G:1520731548;T:1879126916;N:170065	150	150	1857631184	1537732087	1520731548	1879126916	170065	SRX17856943	SRS15377988	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.939	0.11307	0.67562	0.48002	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71639	71639	SRR21869758	SRX17856942	SRS15377987	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		TBBPA H 1	replicate:biological replicate 1\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 7\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221016	AT20221016	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		TBBPA_H_1_1.fq.gz TBBPA_H_1_2.fq.gz	fastq fastq	6725010600.0	44833404.0	TBBPA H 1 1.fq.gz	0:150 1:150	A:1843421900;C:1516907852;G:1500976839;T:1863525958;N:178051	150	150	1843421900	1516907852	1500976839	1863525958	178051	SRX17856942	SRS15377987	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.93897	0.11644	0.67919	0.47402	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71640	71640	SRR21869759	SRX17856941	SRS15377986	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		TBBPA L 3	replicate:biological replicate 3\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 6\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221015	AT20221015	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		TBBPA_L_3_1.fq.gz TBBPA_L_3_2.fq.gz	fastq fastq	6808286400.0	45388576.0	TBBPA L 3 1.fq.gz	0:150 1:150	A:1858988152;C:1543294665;G:1528035258;T:1877760196;N:208129	150	150	1858988152	1543294665	1528035258	1877760196	208129	SRX17856941	SRS15377986	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.93964	0.11186	0.67537	0.47243	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71641	71641	SRR21869760	SRX17856940	SRS15377985	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		TBBPA L 2	replicate:biological replicate 2\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 5\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221014	AT20221014	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		TBBPA_L_2_1.fq.gz TBBPA_L_2_2.fq.gz	fastq fastq	6774228000.0	45161520.0	TBBPA L 2 1.fq.gz	0:150 1:150	A:1848399114;C:1536937930;G:1519456780;T:1869169891;N:264285	150	150	1848399114	1536937930	1519456780	1869169891	264285	SRX17856940	SRS15377985	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.94025	0.11637	0.67462	0.47263	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71642	71642	SRR21869761	SRX17856939	SRS15377984	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		TBBPA L 1	replicate:biological replicate 1\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 4\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221013	AT20221013	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		TBBPA_L_1_2.fq.gz TBBPA_L_1_1.fq.gz	fastq fastq	6921381900.0	46142546.0	TBBPA L 1 1.fq.gz	0:150 1:150	A:1884200037;C:1574208410;G:1563278291;T:1899461955;N:233207	150	150	1884200037	1574208410	1563278291	1899461955	233207	SRX17856939	SRS15377984	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.94086	0.10976	0.67645	0.47784	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71653	71653	SRR21869772	SRX17856928	SRS15377983	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		Control 3	replicate:biological replicate 3\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 3\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221012	AT20221012	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		Control_3_1.fq.gz Control_3_2.fq.gz	fastq fastq	6649034700.0	44326898.0	Control 3 1.fq.gz	0:150 1:150	A:1818740838;C:1502937390;G:1485401626;T:1841692100;N:262746	150	150	1818740838	1502937390	1485401626	1841692100	262746	SRX17856928	SRS15377983	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.938	0.1166	0.66543	0.48941	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71659	71659	SRR21869778	SRX17856922	SRS15377982	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		BHEE H 3	replicate:biological replicate 3\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 15\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221024	AT20221024	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		BHEE_H_3_1.fq.gz BHEE_H_3_2.fq.gz	fastq fastq	6884798700.0	45898658.0	BHEE H 3 1.fq.gz	0:150 1:150	A:1866404874;C:1573550459;G:1557181628;T:1887479557;N:182182	150	150	1866404874	1573550459	1557181628	1887479557	182182	SRX17856922	SRS15377982	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.94047	0.10782	0.67939	0.46829	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71660	71660	SRR21869779	SRX17856921	SRS15377981	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		BHEE H 2	replicate:biological replicate 2\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 14\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221023	AT20221023	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		BHEE_H_2_1.fq.gz BHEE_H_2_2.fq.gz	fastq fastq	6909787800.0	46065252.0	BHEE H 2 1.fq.gz	0:150 1:150	A:1885404557;C:1566069244;G:1552991479;T:1905049514;N:273006	150	150	1885404557	1566069244	1552991479	1905049514	273006	SRX17856921	SRS15377981	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.93913	0.1148	0.68057	0.48135	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71661	71661	SRR21869780	SRX17856920	SRS15377980	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		BHEE H 1	replicate:biological replicate 1\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 13\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221022	AT20221022	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		BHEE_H_1_1.fq.gz BHEE_H_1_2.fq.gz	fastq fastq	6732629100.0	44884194.0	BHEE H 1 1.fq.gz	0:150 1:150	A:1847364286;C:1516868611;G:1502080906;T:1866125318;N:189979	150	150	1847364286	1516868611	1502080906	1866125318	189979	SRX17856920	SRS15377980	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.93635	0.12452	0.68795	0.45878	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71662	71662	SRR21869781	SRX17856919	SRS15377979	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		BHEE L 3	replicate:biological replicate 3\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 12\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221021	AT20221021	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		BHEE_L_3_2.fq.gz BHEE_L_3_1.fq.gz	fastq fastq	7006678200.0	46711188.0	BHEE L 3 1.fq.gz	0:150 1:150	A:1916044576;C:1583765437;G:1567414975;T:1939187929;N:265283	150	150	1916044576	1583765437	1567414975	1939187929	265283	SRX17856919	SRS15377979	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.93694	0.12086	0.67712	0.47941	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71663	71663	SRR21869782	SRX17856918	SRS15377978	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		BHEE L 2	replicate:biological replicate 2\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 11\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221020	AT20221020	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		BHEE_L_2_1.fq.gz BHEE_L_2_2.fq.gz	fastq fastq	6735918300.0	44906122.0	BHEE L 2 1.fq.gz	0:150 1:150	A:1857641267;C:1506371574;G:1491507978;T:1880130050;N:267431	150	150	1857641267	1506371574	1491507978	1880130050	267431	SRX17856918	SRS15377978	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.93519	0.13194	0.67677	0.47877	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71664	71664	SRR21869783	SRX17856917	SRS15377977	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		Control 2	replicate:biological replicate 2\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 2\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221011	AT20221011	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		Control_2_2.fq.gz Control_2_1.fq.gz	fastq fastq	6852696300.0	45684642.0	Control 2 1.fq.gz	0:150 1:150	A:1884613769;C:1539134365;G:1524511981;T:1904229008;N:207177	150	150	1884613769	1539134365	1524511981	1904229008	207177	SRX17856917	SRS15377977	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.93613	0.12084	0.66809	0.49052	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure
71665	71665	SRR21869784	SRX17856916	SRS15377976	SRP402080	PRJNA889683	miRNA mRNA sequencing of zebrafish embryos	PRJNA889683	Other	miRNA Seq and RNA Seq data of zebrafish embryos post exposure to TBBPA and TBBPA BHEE		Control 1	replicate:biological replicate 1\|strain:AB\|isolate:not applicable\|breed:wild type\|cultivar:not applicable\|ecotype:not applicable\|age:120 hpf\|dev stage:larvae\|sex:not applicable\|tissue:whole body 1\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	AT20221010	AT20221010	RNA Seq of zebrafish larvae	RNA-Seq	TRANSCRIPTOMIC	RANDOM PCR	PAIRED	BGISEQ	BGISEQ-500	SRP402080		Control_1_2.fq.gz Control_1_1.fq.gz	fastq fastq	6880244100.0	45868294.0	Control 1 1.fq.gz	0:150 1:150	A:1897293267;C:1539803870;G:1527831180;T:1915045017;N:270766	150	150	1897293267	1539803870	1527831180	1915045017	270766	SRX17856916	SRS15377976	SRA1518395	Jiangsu University\|School of Environment and Safety Engineering	Jiangsu University	1	0.93542	0.12732	0.66916	0.48712	150	B	usable mapping rate	bgi	bgi	unknown	random_priming	unknown	bulk	unknown	unknown	China	2022-10-12	Larval	Larval	Trunk	Surface Structure

Advanced export

JSON shape: default, array, newline-delimited

CREATE TABLE run_metadata("run.accession" VARCHAR, "experiment.accession" VARCHAR, "sample.accession" VARCHAR, "study.accession" VARCHAR, bioproject VARCHAR, "study.title" VARCHAR, "study.alias" VARCHAR, "study.type" VARCHAR, "study.abstract" VARCHAR, "study.attributes" VARCHAR, "study.PMIDs" VARCHAR, "sample.description" VARCHAR, "sample.title" VARCHAR, "sample.alias" VARCHAR, "sample.centername" VARCHAR, "sample.attributes" VARCHAR, "GEOsample.title" VARCHAR, "GEOsample.dataprocessing" VARCHAR, "GEOsample.source" VARCHAR, "GEOsample.treatmentprotocol" VARCHAR, "GEOsample.extractprotocol" VARCHAR, "GEOsample.growthprotocol" VARCHAR, "GEOsample.characteristics" VARCHAR, "GEOsample.accession" VARCHAR, "experiment.title" VARCHAR, "experiment.alias" VARCHAR, "experiment.library_name" VARCHAR, "experiment.design_description" VARCHAR, "experiment.library_construction_protocol" VARCHAR, "experiment.attributes" VARCHAR, "experiment.library_strategy" VARCHAR, "experiment.library_source" VARCHAR, "experiment.library_selection" VARCHAR, "experiment.library_layout" VARCHAR, "experiment.platform" VARCHAR, "experiment.instrument_model" VARCHAR, "experiment.spot_descriptor" VARCHAR, "experiment.study_ref" VARCHAR, "run.title" VARCHAR, "run.attributes" VARCHAR, "run.filename" VARCHAR, "run.semantic_name" VARCHAR, "run.total_bases" DOUBLE, "run.total_spots" DOUBLE, "run.alias" VARCHAR, "run.read_lengths" VARCHAR, "run.base_counts" VARCHAR, "run.r1_length" BIGINT, "run.r2_length" BIGINT, "run.r3_length" BIGINT, "run.r4_length" BIGINT, "run.Acount" BIGINT, "run.Ccount" BIGINT, "run.Gcount" BIGINT, "run.Tcount" BIGINT, "run.Ncount" BIGINT, "run.experiment" VARCHAR, "run.pool_member" VARCHAR, "submission.accession" VARCHAR, "submission.srasource" VARCHAR, "submission.bioprojectsource" VARCHAR, "seqdetective.n_mates" BIGINT, "seqdetective.mapping_rate.mate1" DOUBLE, "seqdetective.mapping_rate.mate2" DOUBLE, "seqdetective.nofeature_rate.mate1" DOUBLE, "seqdetective.nofeature_rate.mate2" DOUBLE, "seqdetective.sparsity.mate1" DOUBLE, "seqdetective.sparsity.mate2" DOUBLE, "seqdetective.pos_strand_rate.mate1" DOUBLE, "seqdetective.pos_strand_rate.mate2" DOUBLE, "seqdetective.readlen.mate1" BIGINT, "seqdetective.readlen.mate2" BIGINT, "seqdetective.judgement.mate1" VARCHAR, "seqdetective.judgement.mate2" VARCHAR, "seqdetective.judgement.reason" VARCHAR, platform_family VARCHAR, instrument_generation VARCHAR, read_bias VARCHAR, selection_class VARCHAR, prep_kit VARCHAR, sc_or_bulk VARCHAR, tech_class VARCHAR, technology VARCHAR, tech_variant VARCHAR, "submission.bioprojectsource.country" VARCHAR, earliest_date DATE, devstage_curation VARCHAR, devstage_curation_coarse VARCHAR, tissue_curation VARCHAR, tissue_curation_coarse VARCHAR);;
CREATE INDEX idx_run_bioproject ON run_metadata(bioproject);;
CREATE INDEX idx_run_run_accession ON run_metadata("run.accession");;