metadata: run_metadata: 71 rows where experiment.library_selection = "PolyA" and tissue

71 rows where experiment.library_selection = "PolyA" and tissue_curation = "Head"

descending

Link	rowid ▼	run.accession	experiment.accession	sample.accession	study.accession	bioproject	study.title	study.alias	study.type	study.abstract	study.attributes	sample.description	sample.title	sample.alias	sample.centername	sample.attributes	experiment.title	experiment.alias	experiment.library_name	experiment.design_description	experiment.library_construction_protocol	experiment.attributes	experiment.library_strategy	experiment.library_source	experiment.library_selection	experiment.library_layout	experiment.platform	experiment.instrument_model	experiment.spot_descriptor	experiment.study_ref	run.title	run.attributes	run.filename	run.semantic_name	run.total_bases	run.total_spots	run.alias	run.read_lengths	run.base_counts	run.r1_length	run.r2_length	run.Acount	run.Ccount	run.Gcount	run.Tcount	run.Ncount	run.experiment	run.pool_member	submission.accession	submission.srasource	submission.bioprojectsource	seqdetective.n_mates	seqdetective.mapping_rate.mate1	seqdetective.mapping_rate.mate2	seqdetective.nofeature_rate.mate1	seqdetective.nofeature_rate.mate2	seqdetective.sparsity.mate1	seqdetective.sparsity.mate2	seqdetective.pos_strand_rate.mate1	seqdetective.pos_strand_rate.mate2	seqdetective.readlen.mate1	seqdetective.readlen.mate2	seqdetective.judgement.mate1	seqdetective.judgement.mate2	seqdetective.judgement.reason	platform_family	instrument_generation	read_bias	selection_class	prep_kit	sc_or_bulk	tech_class	technology	submission.bioprojectsource.country	earliest_date	devstage_curation	devstage_curation_coarse	tissue_curation	tissue_curation_coarse
10407	10407	ERR9077202	ERX8620336	ERS10857224	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT5S8	SAMEA13254181	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254181\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT5S8\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT5S8\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT5S8 s	Sv2aWT5S8 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT5S8L001-1.fastq.gz	fastq	652046291.0	8633105.0	E MTAB 11505:sv2aWT5S8L001	0:75.53 1:0	A:159570243;C:156420495;G:154853315;T:181073030;N:129208	75	0	159570243	156420495	154853315	181073030	129208	ERX8620336	ERS10857224	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95245		0.1148		0.65756		0.47011		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10408	10408	ERR9077203	ERX8620336	ERS10857224	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT5S8	SAMEA13254181	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254181\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT5S8\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT5S8\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT5S8 s	Sv2aWT5S8 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT5S8L002-1.fastq.gz	fastq	653840525.0	8656886.0	E MTAB 11505:sv2aWT5S8L002	0:75.53 1:0	A:159902458;C:156826842;G:155509070;T:181475104;N:127051	75	0	159902458	156826842	155509070	181475104	127051	ERX8620336	ERS10857224	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95226		0.1156		0.65792		0.4667		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10409	10409	ERR9077204	ERX8620336	ERS10857224	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT5S8	SAMEA13254181	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254181\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT5S8\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT5S8\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT5S8 s	Sv2aWT5S8 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT5S8L003-1.fastq.gz	fastq	659584196.0	8732885.0	E MTAB 11505:sv2aWT5S8L003	0:75.53 1:0	A:161257146;C:158299734;G:156793443;T:183128972;N:104901	75	0	161257146	158299734	156793443	183128972	104901	ERX8620336	ERS10857224	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95298		0.11485		0.65798		0.46853		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10410	10410	ERR9077205	ERX8620336	ERS10857224	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT5S8	SAMEA13254181	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254181\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT5S8\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT5S8\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT5S8 s	Sv2aWT5S8 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT5S8L004-1.fastq.gz	fastq	666627746.0	8826123.0	E MTAB 11505:sv2aWT5S8L004	0:75.53 1:0	A:162975131;C:159937258;G:158506242;T:185106149;N:102966	75	0	162975131	159937258	158506242	185106149	102966	ERX8620336	ERS10857224	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.9531		0.11425		0.65736		0.47309		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10411	10411	ERR9077198	ERX8620335	ERS10857223	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT4S7	SAMEA13254180	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254180\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT4S7\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT4S7\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT4S7 s	Sv2aWT4S7 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT4S7L001-1.fastq.gz	fastq	683751258.0	9051795.0	E MTAB 11505:sv2aWT4S7L001	0:75.54 1:0	A:162889923;C:167127644;G:164779384;T:188822907;N:131400	75	0	162889923	167127644	164779384	188822907	131400	ERX8620335	ERS10857223	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95739		0.0959		0.6606		0.46826		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10412	10412	ERR9077199	ERX8620335	ERS10857223	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT4S7	SAMEA13254180	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254180\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT4S7\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT4S7\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT4S7 s	Sv2aWT4S7 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT4S7L002-1.fastq.gz	fastq	684187711.0	9057591.0	E MTAB 11505:sv2aWT4S7L002	0:75.54 1:0	A:162923879;C:167246213;G:165071145;T:188818774;N:127700	75	0	162923879	167246213	165071145	188818774	127700	ERX8620335	ERS10857223	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95724		0.0959		0.66036		0.47026		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10413	10413	ERR9077200	ERX8620335	ERS10857223	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT4S7	SAMEA13254180	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254180\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT4S7\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT4S7\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT4S7 s	Sv2aWT4S7 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT4S7L003-1.fastq.gz	fastq	692320213.0	9165132.0	E MTAB 11505:sv2aWT4S7L003	0:75.54 1:0	A:164772792;C:169329920;G:166952052;T:191164422;N:101027	75	0	164772792	169329920	166952052	191164422	101027	ERX8620335	ERS10857223	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95786		0.09701		0.66131		0.47564		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10414	10414	ERR9077201	ERX8620335	ERS10857223	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT4S7	SAMEA13254180	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254180\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT4S7\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT4S7\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT4S7 s	Sv2aWT4S7 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT4S7L004-1.fastq.gz	fastq	697047881.0	9227702.0	E MTAB 11505:sv2aWT4S7L004	0:75.54 1:0	A:165881728;C:170388393;G:168105900;T:192572068;N:99792	75	0	165881728	170388393	168105900	192572068	99792	ERX8620335	ERS10857223	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.9584		0.09565		0.66115		0.46967		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10415	10415	ERR9077194	ERX8620334	ERS10857222	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT3S2	SAMEA13254179	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254179\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT3S2\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT3S2\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT3S2 s	Sv2aWT3S2 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT3S2L001-1.fastq.gz	fastq	723508205.0	9579193.0	E MTAB 11505:sv2aWT3S2L001	0:75.53 1:0	A:177832489;C:174193135;G:169978598;T:201360184;N:143799	75	0	177832489	174193135	169978598	201360184	143799	ERX8620334	ERS10857222	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95218		0.11732		0.65916		0.47955		71		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10416	10416	ERR9077195	ERX8620334	ERS10857222	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT3S2	SAMEA13254179	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254179\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT3S2\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT3S2\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT3S2 s	Sv2aWT3S2 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT3S2L002-1.fastq.gz	fastq	726190024.0	9614674.0	E MTAB 11505:sv2aWT3S2L002	0:75.53 1:0	A:178408224;C:174776263;G:170820745;T:202047224;N:137568	75	0	178408224	174776263	170820745	202047224	137568	ERX8620334	ERS10857222	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95093		0.11567		0.65865		0.46877		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10417	10417	ERR9077196	ERX8620334	ERS10857222	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT3S2	SAMEA13254179	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254179\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT3S2\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT3S2\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT3S2 s	Sv2aWT3S2 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT3S2L003-1.fastq.gz	fastq	735499955.0	9737845.0	E MTAB 11505:sv2aWT3S2L003	0:75.53 1:0	A:180659962;C:177141362;G:172905323;T:204678308;N:115000	75	0	180659962	177141362	172905323	204678308	115000	ERX8620334	ERS10857222	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95233		0.11614		0.65898		0.47114		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10418	10418	ERR9077197	ERX8620334	ERS10857222	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT3S2	SAMEA13254179	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254179\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT3S2\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT3S2\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT3S2 s	Sv2aWT3S2 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT3S2L004-1.fastq.gz	fastq	745285512.0	9867337.0	E MTAB 11505:sv2aWT3S2L004	0:75.53 1:0	A:183067487;C:179408382;G:175250814;T:207445912;N:112917	75	0	183067487	179408382	175250814	207445912	112917	ERX8620334	ERS10857222	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95245		0.11655		0.65857		0.47087		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10419	10419	ERR9077190	ERX8620333	ERS10857221	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT1S1	SAMEA13254178	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254178\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT1S1\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT1S1\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT1S1 s	Sv2aWT1S1 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT1S1L001-1.fastq.gz	fastq	647414748.0	8571883.0	E MTAB 11505:sv2aWT1S1L001	0:75.53 1:0	A:154593859;C:160498057;G:153809612;T:178389112;N:124108	75	0	154593859	160498057	153809612	178389112	124108	ERX8620333	ERS10857221	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95955		0.08686		0.65955		0.47406		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10420	10420	ERR9077191	ERX8620333	ERS10857221	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT1S1	SAMEA13254178	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254178\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT1S1\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT1S1\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT1S1 s	Sv2aWT1S1 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT1S1L002-1.fastq.gz	fastq	646657758.0	8561861.0	E MTAB 11505:sv2aWT1S1L002	0:75.53 1:0	A:154348044;C:160294625;G:153804048;T:178092212;N:118829	75	0	154348044	160294625	153804048	178092212	118829	ERX8620333	ERS10857221	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95942		0.08632		0.65991		0.47539		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10421	10421	ERR9077192	ERX8620333	ERS10857221	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT1S1	SAMEA13254178	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254178\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT1S1\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT1S1\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT1S1 s	Sv2aWT1S1 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT1S1L003-1.fastq.gz	fastq	654781451.0	8669333.0	E MTAB 11505:sv2aWT1S1L003	0:75.53 1:0	A:156252744;C:162396721;G:155681450;T:180352911;N:97625	75	0	156252744	162396721	155681450	180352911	97625	ERX8620333	ERS10857221	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95972		0.08498		0.66137		0.47457		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10422	10422	ERR9077193	ERX8620333	ERS10857221	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aWT1S1	SAMEA13254178	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254178\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aWT1S1\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/+\|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aWT1S1\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aWT1S1 s	Sv2aWT1S1 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/+	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aWT1S1L004-1.fastq.gz	fastq	659716937.0	8734618.0	E MTAB 11505:sv2aWT1S1L004	0:75.53 1:0	A:157367211;C:163585842;G:156911139;T:181757809;N:94936	75	0	157367211	163585842	156911139	181757809	94936	ERX8620333	ERS10857221	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95985		0.08585		0.65857		0.47349		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10423	10423	ERR9077186	ERX8620332	ERS10857220	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO6S12	SAMEA13254177	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254177\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO6S12\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO6S12\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO6S12 s	Sv2aHO6S12 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO6S12L001-1.fastq.gz	fastq	675018261.0	8937958.0	E MTAB 11505:sv2aHO6S12L001	0:75.52 1:0	A:166564263;C:160539328;G:160003980;T:187773509;N:137181	75	0	166564263	160539328	160003980	187773509	137181	ERX8620332	ERS10857220	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94964		0.13009		0.65413		0.47079		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10424	10424	ERR9077187	ERX8620332	ERS10857220	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO6S12	SAMEA13254177	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254177\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO6S12\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO6S12\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO6S12 s	Sv2aHO6S12 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO6S12L002-1.fastq.gz	fastq	672995667.0	8911161.0	E MTAB 11505:sv2aHO6S12L002	0:75.52 1:0	A:165990319;C:160039398;G:159722501;T:187108781;N:134668	75	0	165990319	160039398	159722501	187108781	134668	ERX8620332	ERS10857220	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94837		0.13029		0.65744		0.47959		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10425	10425	ERR9077188	ERX8620332	ERS10857220	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO6S12	SAMEA13254177	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254177\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO6S12\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO6S12\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO6S12 s	Sv2aHO6S12 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO6S12L003-1.fastq.gz	fastq	683276767.0	9047147.0	E MTAB 11505:sv2aHO6S12L003	0:75.52 1:0	A:168501690;C:162583852;G:162063190;T:190018001;N:110034	75	0	168501690	162583852	162063190	190018001	110034	ERX8620332	ERS10857220	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94983		0.13248		0.6565		0.47977		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10426	10426	ERR9077189	ERX8620332	ERS10857220	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO6S12	SAMEA13254177	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254177\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO6S12\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO6S12\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO6S12 s	Sv2aHO6S12 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO6S12L004-1.fastq.gz	fastq	686469910.0	9089431.0	E MTAB 11505:sv2aHO6S12L004	0:75.52 1:0	A:169287189;C:163276361;G:162844724;T:190954218;N:107418	75	0	169287189	163276361	162844724	190954218	107418	ERX8620332	ERS10857220	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95061		0.13029		0.65389		0.48044		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10427	10427	ERR9077182	ERX8620331	ERS10857219	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO4S10	SAMEA13254176	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254176\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO4S10\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO4S10\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO4S10 s	Sv2aHO4S10 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO4S10L001-1.fastq.gz	fastq	713858966.0	9452474.0	E MTAB 11505:sv2aHO4S10L001	0:75.52 1:0	A:177913695;C:169425317;G:167540012;T:198835532;N:144410	75	0	177913695	169425317	167540012	198835532	144410	ERX8620331	ERS10857219	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94848		0.12981		0.6636		0.47772		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10428	10428	ERR9077183	ERX8620331	ERS10857219	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO4S10	SAMEA13254176	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254176\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO4S10\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO4S10\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO4S10 s	Sv2aHO4S10 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO4S10L002-1.fastq.gz	fastq	717619593.0	9502301.0	E MTAB 11505:sv2aHO4S10L002	0:75.52 1:0	A:178830542;C:170284720;G:168594514;T:199773382;N:136435	75	0	178830542	170284720	168594514	199773382	136435	ERX8620331	ERS10857219	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94812		0.12868		0.6645		0.47281		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10429	10429	ERR9077184	ERX8620331	ERS10857219	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO4S10	SAMEA13254176	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254176\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO4S10\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO4S10\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO4S10 s	Sv2aHO4S10 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO4S10L003-1.fastq.gz	fastq	727263626.0	9629858.0	E MTAB 11505:sv2aHO4S10L003	0:75.52 1:0	A:181201278;C:172619520;G:170780953;T:202550397;N:111478	75	0	181201278	172619520	170780953	202550397	111478	ERX8620331	ERS10857219	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94768		0.12827		0.66596		0.47332		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10430	10430	ERR9077185	ERX8620331	ERS10857219	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO4S10	SAMEA13254176	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254176\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO4S10\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO4S10\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO4S10 s	Sv2aHO4S10 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO4S10L004-1.fastq.gz	fastq	736595278.0	9753337.0	E MTAB 11505:sv2aHO4S10L004	0:75.52 1:0	A:183510872;C:174806534;G:173027794;T:205140640;N:109438	75	0	183510872	174806534	173027794	205140640	109438	ERX8620331	ERS10857219	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94925		0.12904		0.66417		0.47297		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10431	10431	ERR9077178	ERX8620330	ERS10857218	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO3S6	SAMEA13254175	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254175\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO3S6\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO3S6\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO3S6 s	Sv2aHO3S6 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO3S6L001-1.fastq.gz	fastq	710756305.0	9410862.0	E MTAB 11505:sv2aHO3S6L001	0:75.53 1:0	A:175585613;C:170261120;G:166658917;T:198106388;N:144267	75	0	175585613	170261120	166658917	198106388	144267	ERX8620330	ERS10857218	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94827		0.14002		0.66785		0.474		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10432	10432	ERR9077179	ERX8620330	ERS10857218	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO3S6	SAMEA13254175	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254175\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO3S6\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO3S6\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO3S6 s	Sv2aHO3S6 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO3S6L002-1.fastq.gz	fastq	715330324.0	9471415.0	E MTAB 11505:sv2aHO3S6L002	0:75.53 1:0	A:176679775;C:171311031;G:167903237;T:199299483;N:136798	75	0	176679775	171311031	167903237	199299483	136798	ERX8620330	ERS10857218	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.9469		0.13915		0.67004		0.47654		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10433	10433	ERR9077180	ERX8620330	ERS10857218	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO3S6	SAMEA13254175	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254175\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO3S6\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO3S6\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO3S6 s	Sv2aHO3S6 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO3S6L003-1.fastq.gz	fastq	722810562.0	9570364.0	E MTAB 11505:sv2aHO3S6L003	0:75.53 1:0	A:178442845;C:173192786;G:169595085;T:201465522;N:114324	75	0	178442845	173192786	169595085	201465522	114324	ERX8620330	ERS10857218	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94918		0.13979		0.66902		0.47572		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10434	10434	ERR9077181	ERX8620330	ERS10857218	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHO3S6	SAMEA13254175	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254175\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHO3S6\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a / \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHO3S6\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHO3S6 s	Sv2aHO3S6 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a /	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHO3S6L004-1.fastq.gz	fastq	732990507.0	9705054.0	E MTAB 11505:sv2aHO3S6L004	0:75.53 1:0	A:180951130;C:175567778;G:172037542;T:204323488;N:110569	75	0	180951130	175567778	172037542	204323488	110569	ERX8620330	ERS10857218	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.94812		0.13893		0.67085		0.47502		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10435	10435	ERR9077174	ERX8620329	ERS10857217	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET7S9	SAMEA13254174	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254174\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET7S9\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET7S9\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET7S9 s	Sv2aHET7S9 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET7S9L001-1.fastq.gz	fastq	773209432.0	10238087.0	E MTAB 11505:sv2aHET7S9L001	0:75.52 1:0	A:191962953;C:184699376;G:180774008;T:215620759;N:152336	75	0	191962953	184699376	180774008	215620759	152336	ERX8620329	ERS10857217	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95047		0.12485		0.65705		0.4775		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10436	10436	ERR9077175	ERX8620329	ERS10857217	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET7S9	SAMEA13254174	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254174\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET7S9\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET7S9\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET7S9 s	Sv2aHET7S9 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET7S9L002-1.fastq.gz	fastq	773106152.0	10236677.0	E MTAB 11505:sv2aHET7S9L002	0:75.52 1:0	A:191812833;C:184676419;G:180997547;T:215473732;N:145621	75	0	191812833	184676419	180997547	215473732	145621	ERX8620329	ERS10857217	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95016		0.12464		0.65482		0.47419		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10437	10437	ERR9077176	ERX8620329	ERS10857217	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET7S9	SAMEA13254174	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254174\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET7S9\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET7S9\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET7S9 s	Sv2aHET7S9 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET7S9L003-1.fastq.gz	fastq	783061051.0	10368445.0	E MTAB 11505:sv2aHET7S9L003	0:75.52 1:0	A:194289152;C:187108364;G:183177036;T:218370500;N:115999	75	0	194289152	187108364	183177036	218370500	115999	ERX8620329	ERS10857217	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95172		0.12488		0.65445		0.48157		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10438	10438	ERR9077177	ERX8620329	ERS10857217	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET7S9	SAMEA13254174	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254174\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET7S9\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET7S9\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET7S9 s	Sv2aHET7S9 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET7S9L004-1.fastq.gz	fastq	790150025.0	10462214.0	E MTAB 11505:sv2aHET7S9L004	0:75.52 1:0	A:196056500;C:188746833;G:184927588;T:220305922;N:113182	75	0	196056500	188746833	184927588	220305922	113182	ERX8620329	ERS10857217	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95285		0.12478		0.65551		0.4763		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10439	10439	ERR9077170	ERX8620328	ERS10857216	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET4S5	SAMEA13254173	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254173\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET4S5\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET4S5\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET4S5 s	Sv2aHET4S5 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET4S5L001-1.fastq.gz	fastq	685650097.0	9076481.0	E MTAB 11505:sv2aHET4S5L001	0:75.54 1:0	A:161812875;C:167870520;G:166985310;T:188850530;N:130862	75	0	161812875	167870520	166985310	188850530	130862	ERX8620328	ERS10857216	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95733		0.09974		0.65691		0.47392		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10440	10440	ERR9077171	ERX8620328	ERS10857216	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET4S5	SAMEA13254173	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254173\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET4S5\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET4S5\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET4S5 s	Sv2aHET4S5 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET4S5L002-1.fastq.gz	fastq	684402241.0	9059974.0	E MTAB 11505:sv2aHET4S5L002	0:75.54 1:0	A:161493428;C:167520248;G:166882054;T:188383816;N:122695	75	0	161493428	167520248	166882054	188383816	122695	ERX8620328	ERS10857216	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95537		0.09915		0.65719		0.48261		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10441	10441	ERR9077172	ERX8620328	ERS10857216	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET4S5	SAMEA13254173	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254173\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET4S5\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET4S5\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET4S5 s	Sv2aHET4S5 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET4S5L003-1.fastq.gz	fastq	694099126.0	9188245.0	E MTAB 11505:sv2aHET4S5L003	0:75.54 1:0	A:163727378;C:169989210;G:169143224;T:191137588;N:101726	75	0	163727378	169989210	169143224	191137588	101726	ERX8620328	ERS10857216	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95629		0.09861		0.65705		0.47187		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10442	10442	ERR9077173	ERX8620328	ERS10857216	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET4S5	SAMEA13254173	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254173\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET4S5\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET4S5\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET4S5 s	Sv2aHET4S5 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET4S5L004-1.fastq.gz	fastq	698753836.0	9249820.0	E MTAB 11505:sv2aHET4S5L004	0:75.54 1:0	A:164809473;C:171057633;G:170349692;T:192441413;N:95625	75	0	164809473	171057633	170349692	192441413	95625	ERX8620328	ERS10857216	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95613		0.09885		0.65798		0.47227		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10443	10443	ERR9077166	ERX8620327	ERS10857215	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET3S4	SAMEA13254172	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254172\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET3S4\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET3S4\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET3S4 s	Sv2aHET3S4 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET3S4L001-1.fastq.gz	fastq	691298605.0	9151512.0	E MTAB 11505:sv2aHET3S4L001	0:75.54 1:0	A:164743919;C:170752099;G:164763621;T:190912044;N:126922	75	0	164743919	170752099	164763621	190912044	126922	ERX8620327	ERS10857215	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95684		0.09604		0.6603		0.47285		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10444	10444	ERR9077167	ERX8620327	ERS10857215	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET3S4	SAMEA13254172	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254172\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET3S4\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET3S4\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET3S4 s	Sv2aHET3S4 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET3S4L002-1.fastq.gz	fastq	694080975.0	9188259.0	E MTAB 11505:sv2aHET3S4L002	0:75.54 1:0	A:165336810;C:171397273;G:165632321;T:191591872;N:122699	75	0	165336810	171397273	165632321	191591872	122699	ERX8620327	ERS10857215	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95612		0.09694		0.65993		0.46918		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10445	10445	ERR9077168	ERX8620327	ERS10857215	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET3S4	SAMEA13254172	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254172\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET3S4\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET3S4\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET3S4 s	Sv2aHET3S4 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET3S4L003-1.fastq.gz	fastq	703689889.0	9315387.0	E MTAB 11505:sv2aHET3S4L003	0:75.54 1:0	A:167575230;C:173881977;G:167845574;T:194289403;N:97705	75	0	167575230	173881977	167845574	194289403	97705	ERX8620327	ERS10857215	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.9577		0.09608		0.66042		0.47022		74		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10446	10446	ERR9077169	ERX8620327	ERS10857215	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET3S4	SAMEA13254172	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254172\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET3S4\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET3S4\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET3S4 s	Sv2aHET3S4 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET3S4L004-1.fastq.gz	fastq	712116538.0	9426961.0	E MTAB 11505:sv2aHET3S4L004	0:75.54 1:0	A:169598596;C:175885948;G:169866534;T:196669400;N:96060	75	0	169598596	175885948	169866534	196669400	96060	ERX8620327	ERS10857215	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95734		0.09716		0.66054		0.47257		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10447	10447	ERR9077162	ERX8620326	ERS10857214	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET2S3	SAMEA13254171	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254171\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET2S3\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET2S3\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET2S3 s	Sv2aHET2S3 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET2S3L001-1.fastq.gz	fastq	733440522.0	9709422.0	E MTAB 11505:sv2aHET2S3L001	0:75.54 1:0	A:173670000;C:181175353;G:175392793;T:203059256;N:143120	75	0	173670000	181175353	175392793	203059256	143120	ERX8620326	ERS10857214	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95885		0.08758		0.65393		0.47249		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10448	10448	ERR9077163	ERX8620326	ERS10857214	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET2S3	SAMEA13254171	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254171\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET2S3\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET2S3\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET2S3 s	Sv2aHET2S3 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET2S3L002-1.fastq.gz	fastq	732121929.0	9691967.0	E MTAB 11505:sv2aHET2S3L002	0:75.54 1:0	A:173332091;C:180805738;G:175271736;T:202574727;N:137637	75	0	173332091	180805738	175271736	202574727	137637	ERX8620326	ERS10857214	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95775		0.08879		0.6564		0.4718		76		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10449	10449	ERR9077164	ERX8620326	ERS10857214	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET2S3	SAMEA13254171	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254171\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET2S3\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET2S3\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET2S3 s	Sv2aHET2S3 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET2S3L003-1.fastq.gz	fastq	743488189.0	9842286.0	E MTAB 11505:sv2aHET2S3L003	0:75.54 1:0	A:175979238;C:183726319;G:177933958;T:205735955;N:112719	75	0	175979238	183726319	177933958	205735955	112719	ERX8620326	ERS10857214	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.9593		0.08716		0.65437		0.46976		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
10450	10450	ERR9077165	ERX8620326	ERS10857214	ERP135966	PRJEB51339	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E-MTAB-11505	Transcriptome Analysis	Transcriptome analysis of the heads of 6 dpf sv2a / sv2a+/ and sv2a+/+ zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	Protocols: 6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Sv2aHET2S3	SAMEA13254171	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg	ENA first public:2022 04 21\|ENA last update:2022 04 21\|External Id:SAMEA13254171\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven Campus Gasthuisberg\|INSDC first public:2022 04 21T00:32:07Z\|INSDC last update:2022 04 21T00:32:07Z\|INSDC status:public\|Submitter Id:E MTAB 11505:Sv2aHET2S3\|age:6\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:sv2a+/ \|individual:pool of 10 heads\|organism part:head\|sample name:E MTAB 11505:Sv2aHET2S3\|sex:not available\|strain:AB	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	E MTAB 11505:Sv2aHET2S3 s	Sv2aHET2S3 s	RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	6 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled per sample. Total RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. TruSeq RNA Seq sample preparation kit was used to prepare sequencing library of mRNA in accordance with the manufacturer guidelines.	Experimental Factor: genotype:sv2a+/	RNA-Seq	TRANSCRIPTOMIC	PolyA	SINGLE	ILLUMINA	NextSeq 500		ERP135966	NextSeq 500 sequencing; RNA seq experiment of sv2a / sv2a+/ and sv2a+/+ zebrafish larvae	ENA FIRST PUBLIC:2022 04 21\|ENA LAST UPDATE:2022 04 21	sv2aHET2S3L004-1.fastq.gz	fastq	747723481.0	9898304.0	E MTAB 11505:sv2aHET2S3L004	0:75.54 1:0	A:176935451;C:184684782;G:179046040;T:206946124;N:111084	75	0	176935451	184684782	179046040	206946124	111084	ERX8620326	ERS10857214	ERA9644804	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven, Campus Gasthuisberg\|European Nucleotide Archive	1	0.95934		0.08676		0.65533		0.47523		75		B		usable mapping rate	illumina	nextseq	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-04-21	Larval	Larval	Head	Nervous System
11025	11025	ERR9787516	ERX9334792	ERS12088364	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 9	SAMEA14460887	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460887\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:24Z\|INSDC last update:2022 09 12T12:19:24Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 9\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:tsc2 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 9\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 9 p	Sample 9 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:tsc2 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	TSCHOM1_1.fastq.gz TSCHOM1_2.fastq.gz	fastq fastq	6360351174.0	31486887.0	E MTAB 11776:TSCHOM1	0:101 1:101	A:1750731340;C:1410426576;G:1460021447;T:1739131898;N:39913	101	101	1750731340	1410426576	1460021447	1739131898	39913	ERX9334792	ERS12088364	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93517	0.92417	0.15551	0.15199	0.67736	0.6786	0.48763	0.48988	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11026	11026	ERR9787515	ERX9334791	ERS12088363	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 8	SAMEA14460886	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460886\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:24Z\|INSDC last update:2022 09 12T12:19:24Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 8\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:depdc5 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 8\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 8 p	Sample 8 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:depdc5 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	DEPHOM4_1.fastq.gz DEPHOM4_2.fastq.gz	fastq fastq	6195443828.0	30670514.0	E MTAB 11776:DEPHOM4	0:101 1:101	A:1524344281;C:1573560980;G:1585093004;T:1512406843;N:38720	101	101	1524344281	1573560980	1585093004	1512406843	38720	ERX9334791	ERS12088363	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.95088	0.9542	0.17631	0.17203	0.71121	0.70981	0.56015	0.57999	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11027	11027	ERR9787514	ERX9334790	ERS12088362	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 7	SAMEA14460885	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460885\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 7\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:depdc5 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 7\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 7 p	Sample 7 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:depdc5 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	DEPHOM7_1.fastq.gz DEPHOM7_2.fastq.gz	fastq fastq	6201660378.0	30701289.0	E MTAB 11776:DEPHOM7	0:101 1:101	A:1699906420;C:1382805098;G:1427335171;T:1691574092;N:39597	101	101	1699906420	1382805098	1427335171	1691574092	39597	ERX9334790	ERS12088362	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.92781	0.92603	0.15556	0.15416	0.67965	0.67963	0.48209	0.48229	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11028	11028	ERR9787513	ERX9334789	ERS12088361	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 6	SAMEA14460884	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460884\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 6\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:depdc5 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 6\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 6 p	Sample 6 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:depdc5 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	DEPHOM6_1.fastq.gz DEPHOM6_2.fastq.gz	fastq fastq	6255857382.0	30969591.0	E MTAB 11776:DEPHOM6	0:101 1:101	A:1722554517;C:1398134491;G:1424183345;T:1710945949;N:39080	101	101	1722554517	1398134491	1424183345	1710945949	39080	ERX9334789	ERS12088361	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93476	0.93206	0.16121	0.1592	0.67882	0.67898	0.48043	0.47851	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11029	11029	ERR9787512	ERX9334788	ERS12088360	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 5	SAMEA14460883	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460883\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 5\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:depdc5 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 5\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 5 p	Sample 5 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:depdc5 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	DEPHOM1_1.fastq.gz DEPHOM1_2.fastq.gz	fastq fastq	6340417006.0	31388203.0	E MTAB 11776:DEPHOM1	0:101 1:101	A:1738622221;C:1420060351;G:1455477148;T:1726216833;N:40453	101	101	1738622221	1420060351	1455477148	1726216833	40453	ERX9334788	ERS12088360	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93634	0.93167	0.15036	0.14813	0.67809	0.67813	0.47978	0.47851	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11030	11030	ERR9787511	ERX9334787	ERS12088359	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 4	SAMEA14460882	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460882\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 4\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:depdc5 / x tsc2 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 4\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 4 p	Sample 4 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:depdc5 / x tsc2 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	2XHOM7_1.fastq.gz 2XHOM7_2.fastq.gz	fastq fastq	6291880446.0	31147923.0	E MTAB 11776:2XHOM7	0:101 1:101	A:1712784902;C:1424143534;G:1452943449;T:1701969086;N:39475	101	101	1712784902	1424143534	1452943449	1701969086	39475	ERX9334787	ERS12088359	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93869	0.93511	0.15405	0.15042	0.67377	0.67351	0.50599	0.50683	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11031	11031	ERR9787510	ERX9334786	ERS12088358	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 3	SAMEA14460881	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460881\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 3\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:depdc5 / x tsc2 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 3\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 3 p	Sample 3 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:depdc5 / x tsc2 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	2XHOM6_1.fastq.gz 2XHOM6_2.fastq.gz	fastq fastq	6214327596.0	30763998.0	E MTAB 11776:2XHOM6	0:101 1:101	A:1705019759;C:1384064144;G:1432455427;T:1692749964;N:38302	101	101	1705019759	1384064144	1432455427	1692749964	38302	ERX9334786	ERS12088358	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93591	0.92636	0.14492	0.14145	0.67489	0.67491	0.47753	0.49286	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11032	11032	ERR9787509	ERX9334785	ERS12088357	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 2	SAMEA14460880	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460880\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 2\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:depdc5 / x tsc2 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 2\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 2 p	Sample 2 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:depdc5 / x tsc2 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	2XHOM4_1.fastq.gz 2XHOM4_2.fastq.gz	fastq fastq	6301691990.0	31196495.0	E MTAB 11776:2XHOM4	0:101 1:101	A:1698118705;C:1442276237;G:1473988715;T:1687268823;N:39510	101	101	1698118705	1442276237	1473988715	1687268823	39510	ERX9334785	ERS12088357	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.94255	0.93839	0.13232	0.13007	0.67326	0.67294	0.49084	0.49291	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11033	11033	ERR9787508	ERX9334784	ERS12088356	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 16	SAMEA14460879	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460879\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 16\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:wild type genotype\|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 16\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 16 p	Sample 16 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:wild type genotype	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	WT7_1.fastq.gz WT7_2.fastq.gz	fastq fastq	6206666746.0	30726073.0	E MTAB 11776:WT7	0:101 1:101	A:1705689174;C:1387290312;G:1420249657;T:1693397929;N:39674	101	101	1705689174	1387290312	1420249657	1693397929	39674	ERX9334784	ERS12088356	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93493	0.92964	0.15803	0.1554	0.67405	0.67501	0.47988	0.46768	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11034	11034	ERR9787507	ERX9334783	ERS12088355	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 15	SAMEA14460878	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460878\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 15\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:wild type genotype\|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 15\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 15 p	Sample 15 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:wild type genotype	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	WT6_1.fastq.gz WT6_2.fastq.gz	fastq fastq	6360740630.0	31488815.0	E MTAB 11776:WT6	0:101 1:101	A:1735195643;C:1436805269;G:1469558083;T:1719141699;N:39936	101	101	1735195643	1436805269	1469558083	1719141699	39936	ERX9334783	ERS12088355	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93629	0.93343	0.15169	0.1501	0.67572	0.67517	0.47499	0.47879	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11035	11035	ERR9787506	ERX9334782	ERS12088354	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 14	SAMEA14460877	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460877\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 14\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:wild type genotype\|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 14\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 14 p	Sample 14 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:wild type genotype	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	WT4_1.fastq.gz WT4_2.fastq.gz	fastq fastq	6227472342.0	30829071.0	E MTAB 11776:WT4	0:101 1:101	A:1668352581;C:1434152947;G:1468645621;T:1656281986;N:39207	101	101	1668352581	1434152947	1468645621	1656281986	39207	ERX9334782	ERS12088354	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.94261	0.93675	0.15334	0.15049	0.67927	0.67872	0.48762	0.49138	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11036	11036	ERR9787505	ERX9334781	ERS12088353	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 13	SAMEA14460876	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460876\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 13\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:wild type genotype\|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 13\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 13 p	Sample 13 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:wild type genotype	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	WT1_1.fastq.gz WT1_2.fastq.gz	fastq fastq	6332757570.0	31350285.0	E MTAB 11776:WT1	0:101 1:101	A:1726838066;C:1431452165;G:1460746594;T:1713681043;N:39702	101	101	1726838066	1431452165	1460746594	1713681043	39702	ERX9334781	ERS12088353	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.92422	0.93556	0.14884	0.14926	0.67694	0.67564	0.48223	0.48884	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11037	11037	ERR9787504	ERX9334780	ERS12088352	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 12	SAMEA14460875	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460875\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 12\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:tsc2 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 12\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 12 p	Sample 12 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:tsc2 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	TSCHOM7_1.fastq.gz TSCHOM7_2.fastq.gz	fastq fastq	6216990360.0	30777180.0	E MTAB 11776:TSCHOM7	0:101 1:101	A:1710256020;C:1390027205;G:1419250792;T:1697417099;N:39244	101	101	1710256020	1390027205	1419250792	1697417099	39244	ERX9334780	ERS12088352	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93162	0.92801	0.15191	0.14943	0.67789	0.67951	0.47915	0.47762	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11038	11038	ERR9787503	ERX9334779	ERS12088351	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 11	SAMEA14460874	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460874\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 11\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:tsc2 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 11\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 11 p	Sample 11 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:tsc2 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	TSCHOM6_1.fastq.gz TSCHOM6_2.fastq.gz	fastq fastq	6199081848.0	30688524.0	E MTAB 11776:TSCHOM6	0:101 1:101	A:1705859045;C:1387530558;G:1415224718;T:1690428701;N:38826	101	101	1705859045	1387530558	1415224718	1690428701	38826	ERX9334779	ERS12088351	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93583	0.93349	0.15923	0.15664	0.67976	0.67986	0.48632	0.48376	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11039	11039	ERR9787502	ERX9334778	ERS12088350	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 10	SAMEA14460873	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460873\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 10\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:tsc2 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 10\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 10 p	Sample 10 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:tsc2 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	TSCHOM4_1.fastq.gz TSCHOM4_2.fastq.gz	fastq fastq	6287836204.0	31127902.0	E MTAB 11776:TSCHOM4	0:101 1:101	A:1673762523;C:1453880149;G:1493343671;T:1666809849;N:40012	101	101	1673762523	1453880149	1493343671	1666809849	40012	ERX9334778	ERS12088350	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.94269	0.9375	0.14166	0.13979	0.67476	0.67722	0.4927	0.49365	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
11040	11040	ERR9787501	ERX9334777	ERS12088349	ERP137937	PRJEB53153	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E-MTAB-11776	Transcriptome Analysis	Transcriptome analysis of the heads of 5 dpf epdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae to provide insights into the neuropathological processes underlying the observed epileptic phenotype in sv2a / zebrafish larvae.	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	Protocols: 5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Sample 1	SAMEA14460872	Laboratory for Molecular Biodiscovery, KU Leuven	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12\|External Id:SAMEA14460872\|INSDC center alias:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC center name:Laboratory for Molecular Biodiscovery KU Leuven\|INSDC first public:2022 09 12T12:19:23Z\|INSDC last update:2022 09 12T12:19:23Z\|INSDC status:public\|Submitter Id:E MTAB 11776:Sample 1\|age:5\|broker name:ArrayExpress\|common name:zebrafish\|developmental stage:larval stage\|genotype:depdc5 / x tsc2 / \|individual:pool of 10 larvae\|isolate:not applicable\|organism part:head\|sample name:E MTAB 11776:Sample 1\|scientific name:Danio rerio\|sex:non available\|strain:AB	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	E MTAB 11776:Sample 1 p	Sample 1 p	RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	5 dpf zebrafish larvae were anesthetized and decapitated using a razor blade. 10 heads were pooled in quadruplicate per genotype. otal RNA was extracted using TRIzol reagent Invitrogen followed by phenol chlorophorm extraction and isopropanol precipitation. post ethanol washes the RNA pellet was air dried dissolved in nuclease free water Fermentas. Illumina TruSeq Stranded mRNA Seq sample preparation kit was used to prepare the mRNA sequencing library according to the manufacturer guidelines.	Experimental Factor: genotype:depdc5 / x tsc2 /	RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		ERP137937	Illumina NovaSeq 6000 paired end sequencing; RNA seq of depdc5 / tsc2 / depdc5 / x tsc2 / and wildtype zebrafish larvae	ENA FIRST PUBLIC:2022 09 12\|ENA LAST UPDATE:2022 09 12	2XHOM1_1.fastq.gz 2XHOM1_2.fastq.gz	fastq fastq	6232605768.0	30854484.0	E MTAB 11776:2XHOM1	0:101 1:101	A:1725401812;C:1384507160;G:1410306583;T:1712351429;N:38784	101	101	1725401812	1384507160	1410306583	1712351429	38784	ERX9334777	ERS12088349	ERA14756702	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	Laboratory for Molecular Biodiscovery, KU Leuven\|European Nucleotide Archive	2	0.93594	0.93262	0.15282	0.14977	0.67503	0.67373	0.49522	0.49759	101	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	unknown	unknown	Belgium	2022-09-12	Larval	Larval	Head	Nervous System
34192	34192	SRR31443228	SRX26812023	SRS23296672	SRP546978	PRJNA1189474	Bulk RNA Seq of srrm4 homozygous mutant and wild type sibling larvae at 3 dpf	PRJNA1189474	Other	The goal of this project is to assess the effects of mutations in zebrafish srrm4 on alternative splicing of microexons. Homozygous mutant and homozygous wild type sibling larvae were identified from heterozygous parent crosses Total RNA was isolated for sequencing at 3 dpf				srrm4[y712] mutant replicate 3		strain:Tpfel long fin\|age:3 dpf\|collection date:2022 02\|geo loc name:USA: Bethesda\|sex:not applicable\|tissue:head and torso\|genotype:homozygous mutant\|Replicate:mutant 3\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	srrm4[y712] mutant replicate 3	srrm4[y712] mutant replicate 3	TruSeq library			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		SRP546978		assembly:GRCz11	25938_mut3.pass2Aligned.sortedByCoord.out.bam	bam	23466336192.0	117587529.0	25938 mut3.pass2Aligned.sortedByCoord.out.bam	0:100.13 1:100.08	A:6298034402;C:5433884683;G:5344985734;T:6388443446;N:987927	100	100	6298034402	5433884683	5344985734	6388443446	987927	SRX26812023	SRS23296672	SRA2019780	Eunice Kennedy Shriver National Institute of Child Health and Human Development\|Division of Developmental Biology	Eunice Kennedy Shriver National Institute of Child Health and Human Development	2	0.95864	0.95894	0.10681	0.1052	0.65385	0.65403	0.46511	0.46252	99	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	bulk	bulk	United States	2024-11-22	Larval	Larval	Head	Nervous System
34193	34193	SRR31443229	SRX26812022	SRS23296671	SRP546978	PRJNA1189474	Bulk RNA Seq of srrm4 homozygous mutant and wild type sibling larvae at 3 dpf	PRJNA1189474	Other	The goal of this project is to assess the effects of mutations in zebrafish srrm4 on alternative splicing of microexons. Homozygous mutant and homozygous wild type sibling larvae were identified from heterozygous parent crosses Total RNA was isolated for sequencing at 3 dpf				srrm4[y712] wild type replicate 3		strain:Tpfel long fin\|age:3 dpf\|collection date:2022 02\|geo loc name:USA: Bethesda\|sex:not applicable\|tissue:head and torso\|genotype:homozygous wild type\|Replicate:wild type 3\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	srrm4[y712] wild type replicate 3	srrm4[y712] wild type replicate 3	TruSeq library			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		SRP546978		assembly:GRCz11	25938_wt3.pass2Aligned.sortedByCoord.out.bam	bam	23979171134.0	120156039.0	25938 wt3.pass2Aligned.sortedByCoord.out.bam	0:100.12 1:100.07	A:6398807397;C:5589997524;G:5503127729;T:6486232627;N:1005857	100	100	6398807397	5589997524	5503127729	6486232627	1005857	SRX26812022	SRS23296671	SRA2019780	Eunice Kennedy Shriver National Institute of Child Health and Human Development\|Division of Developmental Biology	Eunice Kennedy Shriver National Institute of Child Health and Human Development	2	0.95941	0.96004	0.10323	0.10191	0.65451	0.6532	0.46396	0.46398	101	100	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	bulk	bulk	United States	2024-11-22	Larval	Larval	Head	Nervous System
34194	34194	SRR31443230	SRX26812021	SRS23296670	SRP546978	PRJNA1189474	Bulk RNA Seq of srrm4 homozygous mutant and wild type sibling larvae at 3 dpf	PRJNA1189474	Other	The goal of this project is to assess the effects of mutations in zebrafish srrm4 on alternative splicing of microexons. Homozygous mutant and homozygous wild type sibling larvae were identified from heterozygous parent crosses Total RNA was isolated for sequencing at 3 dpf				srrm4[y712] mutant replicate 2		strain:Tpfel long fin\|age:3 dpf\|collection date:2022 02\|geo loc name:USA: Bethesda\|sex:not applicable\|tissue:head and torso\|genotype:homozygous mutant\|Replicate:mutant 2\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	srrm4[y712] mutant replicate 2	srrm4[y712] mutant replicate 2	TruSeq library			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		SRP546978		assembly:GRCz11	25938_mut2.pass2Aligned.sortedByCoord.out.bam	bam	20256127500.0	101792067.0	25938 mut2.pass2Aligned.sortedByCoord.out.bam	0:100.05 1:100.00	A:5435798119;C:4683997479;G:4650293108;T:5485187428;N:851366	100	100	5435798119	4683997479	4650293108	5485187428	851366	SRX26812021	SRS23296670	SRA2019780	Eunice Kennedy Shriver National Institute of Child Health and Human Development\|Division of Developmental Biology	Eunice Kennedy Shriver National Institute of Child Health and Human Development	2	0.96008	0.96049	0.10232	0.10156	0.66072	0.65932	0.4668	0.46817	95	95	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	bulk	bulk	United States	2024-11-22	Larval	Larval	Head	Nervous System
34195	34195	SRR31443231	SRX26812020	SRS23296669	SRP546978	PRJNA1189474	Bulk RNA Seq of srrm4 homozygous mutant and wild type sibling larvae at 3 dpf	PRJNA1189474	Other	The goal of this project is to assess the effects of mutations in zebrafish srrm4 on alternative splicing of microexons. Homozygous mutant and homozygous wild type sibling larvae were identified from heterozygous parent crosses Total RNA was isolated for sequencing at 3 dpf				srrm4[y712] wild type replicate 2		strain:Tpfel long fin\|age:3 dpf\|collection date:2022 02\|geo loc name:USA: Bethesda\|sex:not applicable\|tissue:head and torso\|genotype:homozygous wild type\|Replicate:wild type 2\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	srrm4[y712] wild type replicate 2	srrm4[y712] wild type replicate 2	TruSeq library			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		SRP546978		assembly:GRCz11	25938_wt2.pass2Aligned.sortedByCoord.out.bam	bam	22698373371.0	113599687.0	25938 wt2.pass2Aligned.sortedByCoord.out.bam	0:100.18 1:100.12	A:6063922145;C:5275724786;G:5212055837;T:6145709475;N:961128	100	100	6063922145	5275724786	5212055837	6145709475	961128	SRX26812020	SRS23296669	SRA2019780	Eunice Kennedy Shriver National Institute of Child Health and Human Development\|Division of Developmental Biology	Eunice Kennedy Shriver National Institute of Child Health and Human Development	2	0.96129	0.96063	0.1003	0.09861	0.65744	0.65748	0.46167	0.46817	98	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	bulk	bulk	United States	2024-11-22	Larval	Larval	Head	Nervous System
34196	34196	SRR31443232	SRX26812019	SRS23296667	SRP546978	PRJNA1189474	Bulk RNA Seq of srrm4 homozygous mutant and wild type sibling larvae at 3 dpf	PRJNA1189474	Other	The goal of this project is to assess the effects of mutations in zebrafish srrm4 on alternative splicing of microexons. Homozygous mutant and homozygous wild type sibling larvae were identified from heterozygous parent crosses Total RNA was isolated for sequencing at 3 dpf				srrm4[y712] mutant replicate 1		strain:Tpfel long fin\|age:3 dpf\|collection date:2021 06\|geo loc name:USA: Bethesda\|sex:not applicable\|tissue:head and torso\|genotype:homozygous mutant\|Replicate:mutant 1\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	srrm4[y712] mutant replicate 1	srrm4[y712] mutant replicate 1	TruSeq library			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		SRP546978		assembly:GRCz11	25938_mut.pass2Aligned.sortedByCoord.out.bam	bam	11282501509.0	56702666.0	25938 mut.pass2Aligned.sortedByCoord.out.bam	0:99.65 1:99.55	A:2764745971;C:2868447715;G:2856237429;T:2792914545;N:155849	99	99	2764745971	2868447715	2856237429	2792914545	155849	SRX26812019	SRS23296667	SRA2019780	Eunice Kennedy Shriver National Institute of Child Health and Human Development\|Division of Developmental Biology	Eunice Kennedy Shriver National Institute of Child Health and Human Development												B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	bulk	bulk	United States	2024-11-22	Larval	Larval	Head	Nervous System
34197	34197	SRR31443233	SRX26812018	SRS23296668	SRP546978	PRJNA1189474	Bulk RNA Seq of srrm4 homozygous mutant and wild type sibling larvae at 3 dpf	PRJNA1189474	Other	The goal of this project is to assess the effects of mutations in zebrafish srrm4 on alternative splicing of microexons. Homozygous mutant and homozygous wild type sibling larvae were identified from heterozygous parent crosses Total RNA was isolated for sequencing at 3 dpf				srrm4[y712] wild type replicate 1		strain:Tpfel long fin\|age:3 dpf\|collection date:2021 06\|geo loc name:USA: Bethesda\|sex:not applicable\|tissue:head and torso\|genotype:homozygous wild type\|Replicate:wild type 1\|BioSampleModel:Model organism or animal	RNA Seq of zebrafish larvae	srrm4[y712] wild type replicate 1	srrm4[y712] wild type replicate 1	TruSeq library			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina NovaSeq 6000		SRP546978		assembly:GRCz11	25938_wt.pass2Aligned.sortedByCoord.out.bam	bam	16346812838.0	82104499.0	25938 wt.pass2Aligned.sortedByCoord.out.bam	0:99.65 1:99.56	A:3996717287;C:4167381503;G:4130586142;T:4051899914;N:227992	99	99	3996717287	4167381503	4130586142	4051899914	227992	SRX26812018	SRS23296668	SRA2019780	Eunice Kennedy Shriver National Institute of Child Health and Human Development\|Division of Developmental Biology	Eunice Kennedy Shriver National Institute of Child Health and Human Development	2	0.97776	0.97907	0.04095	0.04006	0.6702	0.67034	0.46611	0.46144	99	101	B	B	biological fallback assumption	illumina	novaseq_era	unknown	poly_a	trueseq	bulk	bulk	bulk	United States	2024-11-22	Larval	Larval	Head	Nervous System
39641	39641	SRR2029856	SRX1030037	SRS938363	SRP058038	PRJNA283169	Danio rerio Raw sequence reads	PRJNA283169	Other	RNA sequencing of whole head and Hcrt cells of 6dpf larvae zebrafish.		RNA was purified from WT 6dpf zebrafish larvae	WT whole head larva zebrafish	WT		breed:AB\|dev stage:6 dpf\|sex:pooled male and female\|tissue:whole head\|BioSampleModel:Model organism or animal	Transcriptional profiling of hypocretin neurons identifies the sleep regulator Kcnh4a	WT 5	WT 5	Biological replicate 5			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	SRP058038			Sample_ii-na_2.fastq Sample_ii-na_1.fastq	fastq fastq	4970948000.0	24854740.0	WT 5	0:100 1:100	A:1326071248;C:1167369974;G:1133391102;T:1318946364;N:25169312	100	100	1326071248	1167369974	1133391102	1318946364	25169312	SRX1030037	SRS938363	SRA266465	Bar Ilan University\|Dr. Lior Appelbaum	Bar Ilan University	2	0.93711	0.93844	0.07857	0.07934	0.64613	0.64711	0.47852	0.47693	100	100	B	B	biological fallback assumption	illumina	hiseq_era	unknown	poly_a	unknown	bulk	unknown	unknown	Israel	2016-05-06	Larval	Larval	Head	Nervous System
39642	39642	SRR2025058	SRX1030036	SRS938363	SRP058038	PRJNA283169	Danio rerio Raw sequence reads	PRJNA283169	Other	RNA sequencing of whole head and Hcrt cells of 6dpf larvae zebrafish.		RNA was purified from WT 6dpf zebrafish larvae	WT whole head larva zebrafish	WT		breed:AB\|dev stage:6 dpf\|sex:pooled male and female\|tissue:whole head\|BioSampleModel:Model organism or animal	Transcriptional profiling of hypocretin neurons identifies the sleep regulator Kcnh4a	WT 4	WT 4	Biological replicate 4			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	SRP058038		loader:latf load	Sample_i-na_1.fastq Sample_i-na_2.fastq	fastq fastq	2622392600.0	26223926.0	WT 4	0:100	A:713649918;C:606120888;G:578652870;T:712333113;N:11635811	100		713649918	606120888	578652870	712333113	11635811	SRX1030036	SRS938363	SRA266465	Bar Ilan University\|Dr. Lior Appelbaum	Bar Ilan University	1	0.93312		0.09652		0.64758		0.47024		100		B		usable mapping rate	illumina	hiseq_era	unknown	poly_a	unknown	bulk	unknown	unknown	Israel	2016-05-06	Larval	Larval	Head	Nervous System
39643	39643	SRR2025020	SRX1030035	SRS938363	SRP058038	PRJNA283169	Danio rerio Raw sequence reads	PRJNA283169	Other	RNA sequencing of whole head and Hcrt cells of 6dpf larvae zebrafish.		RNA was purified from WT 6dpf zebrafish larvae	WT whole head larva zebrafish	WT		breed:AB\|dev stage:6 dpf\|sex:pooled male and female\|tissue:whole head\|BioSampleModel:Model organism or animal	Transcriptional profiling of hypocretin neurons identifies the sleep regulator Kcnh4a	WT 3	WT 3	Biological replicate 3			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	SRP058038		loader:latf load	Sample_iii-a_2.fastq Sample_iii-a_1.fastq	fastq fastq	2578775300.0	25787753.0	WT 3	0:100	A:710064453;C:580284486;G:570277437;T:702861739;N:15287185	100		710064453	580284486	570277437	702861739	15287185	SRX1030035	SRS938363	SRA266465	Bar Ilan University\|Dr. Lior Appelbaum	Bar Ilan University	1	0.92355		0.11281		0.64346		0.47868		100		B		usable mapping rate	illumina	hiseq_era	unknown	poly_a	unknown	bulk	unknown	unknown	Israel	2016-05-06	Larval	Larval	Head	Nervous System
39644	39644	SRR2025004	SRX1030034	SRS938363	SRP058038	PRJNA283169	Danio rerio Raw sequence reads	PRJNA283169	Other	RNA sequencing of whole head and Hcrt cells of 6dpf larvae zebrafish.		RNA was purified from WT 6dpf zebrafish larvae	WT whole head larva zebrafish	WT		breed:AB\|dev stage:6 dpf\|sex:pooled male and female\|tissue:whole head\|BioSampleModel:Model organism or animal	Transcriptional profiling of hypocretin neurons identifies the sleep regulator Kcnh4a	WT 2	WT 2	Biological replicate 2			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	SRP058038		loader:latf load			5748638600.0	57486386.0	WT 2	0:100	A:1582673281;C:1315049990;G:1252719550;T:1572983229;N:25212550	100		1582673281	1315049990	1252719550	1572983229	25212550	SRX1030034	SRS938363	SRA266465	Bar Ilan University\|Dr. Lior Appelbaum	Bar Ilan University	1	0.93088		0.09912		0.64439		0.4756		100		B		usable mapping rate	illumina	hiseq_era	unknown	poly_a	unknown	bulk	unknown	unknown	Israel	2015-05-18	Larval	Larval	Head	Nervous System
39645	39645	SRR2025001	SRX1030032	SRS938363	SRP058038	PRJNA283169	Danio rerio Raw sequence reads	PRJNA283169	Other	RNA sequencing of whole head and Hcrt cells of 6dpf larvae zebrafish.		RNA was purified from WT 6dpf zebrafish larvae	WT whole head larva zebrafish	WT		breed:AB\|dev stage:6 dpf\|sex:pooled male and female\|tissue:whole head\|BioSampleModel:Model organism or animal	Transcriptional profiling of hypocretin neurons identifies the sleep regulator Kcnh4a	WT 1	WT 1	RNA was purified from 6dpf WT larvae zebrafish. Biological replicate 1			RNA-Seq	TRANSCRIPTOMIC	PolyA	PAIRED	ILLUMINA	Illumina HiSeq 2000	<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>200</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>101</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>	SRP058038		loader:latf load			2116790100.0	21167901.0	WT 1	0:100	A:574102889;C:484943445;G:475977813;T:569490955;N:12274998	100		574102889	484943445	475977813	569490955	12274998	SRX1030032	SRS938363	SRA266465	Bar Ilan University\|Dr. Lior Appelbaum	Bar Ilan University	1	0.93025		0.10052		0.64398		0.47695		100		B		usable mapping rate	illumina	hiseq_era	unknown	poly_a	unknown	bulk	unknown	unknown	Israel	2015-05-18	Larval	Larval	Head	Nervous System

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CREATE TABLE run_metadata("run.accession" VARCHAR, "experiment.accession" VARCHAR, "sample.accession" VARCHAR, "study.accession" VARCHAR, bioproject VARCHAR, "study.title" VARCHAR, "study.alias" VARCHAR, "study.type" VARCHAR, "study.abstract" VARCHAR, "study.attributes" VARCHAR, "study.PMIDs" VARCHAR, "sample.description" VARCHAR, "sample.title" VARCHAR, "sample.alias" VARCHAR, "sample.centername" VARCHAR, "sample.attributes" VARCHAR, "GEOsample.title" VARCHAR, "GEOsample.dataprocessing" VARCHAR, "GEOsample.source" VARCHAR, "GEOsample.treatmentprotocol" VARCHAR, "GEOsample.extractprotocol" VARCHAR, "GEOsample.growthprotocol" VARCHAR, "GEOsample.characteristics" VARCHAR, "GEOsample.accession" VARCHAR, "experiment.title" VARCHAR, "experiment.alias" VARCHAR, "experiment.library_name" VARCHAR, "experiment.design_description" VARCHAR, "experiment.library_construction_protocol" VARCHAR, "experiment.attributes" VARCHAR, "experiment.library_strategy" VARCHAR, "experiment.library_source" VARCHAR, "experiment.library_selection" VARCHAR, "experiment.library_layout" VARCHAR, "experiment.platform" VARCHAR, "experiment.instrument_model" VARCHAR, "experiment.spot_descriptor" VARCHAR, "experiment.study_ref" VARCHAR, "run.title" VARCHAR, "run.attributes" VARCHAR, "run.filename" VARCHAR, "run.semantic_name" VARCHAR, "run.total_bases" DOUBLE, "run.total_spots" DOUBLE, "run.alias" VARCHAR, "run.read_lengths" VARCHAR, "run.base_counts" VARCHAR, "run.r1_length" BIGINT, "run.r2_length" BIGINT, "run.r3_length" BIGINT, "run.r4_length" BIGINT, "run.Acount" BIGINT, "run.Ccount" BIGINT, "run.Gcount" BIGINT, "run.Tcount" BIGINT, "run.Ncount" BIGINT, "run.experiment" VARCHAR, "run.pool_member" VARCHAR, "submission.accession" VARCHAR, "submission.srasource" VARCHAR, "submission.bioprojectsource" VARCHAR, "seqdetective.n_mates" BIGINT, "seqdetective.mapping_rate.mate1" DOUBLE, "seqdetective.mapping_rate.mate2" DOUBLE, "seqdetective.nofeature_rate.mate1" DOUBLE, "seqdetective.nofeature_rate.mate2" DOUBLE, "seqdetective.sparsity.mate1" DOUBLE, "seqdetective.sparsity.mate2" DOUBLE, "seqdetective.pos_strand_rate.mate1" DOUBLE, "seqdetective.pos_strand_rate.mate2" DOUBLE, "seqdetective.readlen.mate1" BIGINT, "seqdetective.readlen.mate2" BIGINT, "seqdetective.judgement.mate1" VARCHAR, "seqdetective.judgement.mate2" VARCHAR, "seqdetective.judgement.reason" VARCHAR, platform_family VARCHAR, instrument_generation VARCHAR, read_bias VARCHAR, selection_class VARCHAR, prep_kit VARCHAR, sc_or_bulk VARCHAR, tech_class VARCHAR, technology VARCHAR, tech_variant VARCHAR, "submission.bioprojectsource.country" VARCHAR, earliest_date DATE, devstage_curation VARCHAR, devstage_curation_coarse VARCHAR, tissue_curation VARCHAR, tissue_curation_coarse VARCHAR);;
CREATE INDEX idx_run_bioproject ON run_metadata(bioproject);;
CREATE INDEX idx_run_run_accession ON run_metadata("run.accession");;