metadata: run_metadata: 242 rows where experiment.library_selection = "PCR", experiment.library_strategy = "AMPLICON" and experiment.platform = "ILLUMINA"

242 rows where experiment.library_selection = "PCR", experiment.library_strategy = "AMPLICON" and experiment.platform = "ILLUMINA"

descending

Link	rowid ▼	run.accession	experiment.accession	sample.accession	study.accession	bioproject	study.title	study.alias	study.type	study.abstract	sample.description	sample.title	sample.alias	sample.attributes	experiment.title	experiment.alias	experiment.library_name	experiment.design_description	experiment.library_strategy	experiment.library_source	experiment.library_selection	experiment.library_layout	experiment.platform	experiment.instrument_model	experiment.study_ref	run.filename	run.semantic_name	run.total_bases	run.total_spots	run.alias	run.read_lengths	run.base_counts	run.r1_length	run.r2_length	run.Acount	run.Ccount	run.Gcount	run.Tcount	run.Ncount	run.experiment	run.pool_member	submission.accession	submission.srasource	submission.bioprojectsource	seqdetective.n_mates	seqdetective.mapping_rate.mate1	seqdetective.mapping_rate.mate2	seqdetective.nofeature_rate.mate1	seqdetective.nofeature_rate.mate2	seqdetective.sparsity.mate1	seqdetective.sparsity.mate2	seqdetective.pos_strand_rate.mate1	seqdetective.pos_strand_rate.mate2	seqdetective.readlen.mate1	seqdetective.readlen.mate2	seqdetective.judgement.mate1	seqdetective.judgement.mate2	seqdetective.judgement.reason	platform_family	instrument_generation	read_bias	selection_class	prep_kit	sc_or_bulk	tech_class	technology	submission.bioprojectsource.country	earliest_date	devstage_curation	devstage_curation_coarse	tissue_curation	tissue_curation_coarse
48726	48726	SRR7789580	SRX4644423	SRS3742493	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			TDCIPP 12hpf 3 S18	strain:5D\|isolate:108\|dev stage:12 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	TDCIPP 12hpf 3 S18	TDCIPP 12hpf 3 S18	TDCIPP 12hpf 3 S18	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	TDCIPP-12hpf-3_S18_L001_R2_001.fastq.gz TDCIPP-12hpf-3_S18_L001_R1_001.fastq.gz	fastq fastq	103340472.0	472844.0	TDCIPP 12hpf 3 S18 L001 R1 001.fastq.gz	0:109.23 1:109.32	A:26737838;C:24795090;G:24934613;T:26529096;N:343835	109	109	26737838	24795090	24934613	26529096	343835	SRX4644423	SRS3742493	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.95154	0.95221	0.00019	0.00019	0.99922	0.99924	0.41074	0.41244	121	121	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Segmentation	Embryo	Embryo Imprecise	All anatomical structures
48727	48727	SRR7789581	SRX4644422	SRS3742492	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			TDCIPP 12hpf 2 S17	strain:5D\|isolate:107\|dev stage:12 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	TDCIPP 12hpf 2 S17	TDCIPP 12hpf 2 S17	TDCIPP 12hpf 2 S17	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	TDCIPP-12hpf-2_S17_L001_R1_001.fastq.gz TDCIPP-12hpf-2_S17_L001_R2_001.fastq.gz	fastq fastq	127382315.0	575073.0	TDCIPP 12hpf 2 S17 L001 R1 001.fastq.gz	0:110.70 1:110.81	A:32604644;C:30882861;G:31076792;T:32385804;N:432214	110	110	32604644	30882861	31076792	32385804	432214	SRX4644422	SRS3742492	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.94383	0.94386	0.00021	0.00022	0.99926	0.99926	0.41023	0.38711	151	151	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Segmentation	Embryo	Embryo Imprecise	All anatomical structures
48728	48728	SRR7789582	SRX4644421	SRS3742490	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			TDCIPP 12hpf 1 S16	strain:5D\|isolate:106\|dev stage:12 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	TDCIPP 12hpf 1 S16	TDCIPP 12hpf 1 S16	TDCIPP 12hpf 1 S16	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	TDCIPP-12hpf-1_S16_L001_R1_001.fastq.gz TDCIPP-12hpf-1_S16_L001_R2_001.fastq.gz	fastq fastq	106771425.0	482515.0	TDCIPP 12hpf 1 S16 L001 R1 001.fastq.gz	0:110.59 1:110.69	A:27853264;C:25384933;G:25518809;T:27629968;N:384451	110	110	27853264	25384933	25518809	27629968	384451	SRX4644421	SRS3742490	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.95913	0.95873	0.00021	0.00025	0.99928	0.99928	0.4122	0.39928	79	79	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Segmentation	Embryo	Embryo Imprecise	All anatomical structures
48729	48729	SRR7789583	SRX4644420	SRS3742491	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			DMSO 12hpf 3 S9x	strain:5D\|isolate:105\|dev stage:12 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	DMSO 12hpf 3 S9x	DMSO 12hpf 3 S9x	DMSO 12hpf 3 S9x	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	DMSO-12hpf-3_S9x_L001_R2_001.fastq.gz DMSO-12hpf-3_S9x_L001_R1_001.fastq.gz	fastq fastq	106526213.0	483892.0	DMSO 12hpf 3 S9x L001 R2 001.fastq.gz	0:110.00 1:110.14	A:27523846;C:25609135;G:25786277;T:27228622;N:378333	110	110	27523846	25609135	25786277	27228622	378333	SRX4644420	SRS3742491	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.95736	0.95668	0.00013	0.00011	0.99924	0.99926	0.45348	0.45617	77	77	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Segmentation	Embryo	Embryo Imprecise	All anatomical structures
48730	48730	SRR7789584	SRX4644419	SRS3742489	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			DMSO 12hpf 2 S8	strain:5D\|isolate:104\|dev stage:12 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	DMSO 12hpf 2 S8	DMSO 12hpf 2 S8	DMSO 12hpf 2 S8	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	DMSO-12hpf-2_S8_L001_R1_001.fastq.gz DMSO-12hpf-2_S8_L001_R2_001.fastq.gz	fastq fastq	126754105.0	599652.0	DMSO 12hpf 2 S8 L001 R1 001.fastq.gz	0:105.62 1:105.76	A:32875248;C:30352965;G:30543115;T:32575671;N:407106	105	105	32875248	30352965	30543115	32575671	407106	SRX4644419	SRS3742489	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.9631	0.96229	0.00019	0.00019	0.99928	0.99928	0.45939	0.44598	92	92	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Segmentation	Embryo	Embryo Imprecise	All anatomical structures
48731	48731	SRR7789585	SRX4644418	SRS3742488	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			DMSO 12hpf 1 S7	strain:5D\|isolate:103\|dev stage:12 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	DMSO 12hpf 1 S7	DMSO 12hpf 1 S7	DMSO 12hpf 1 S7	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	DMSO-12hpf-1_S7_L001_R2_001.fastq.gz DMSO-12hpf-1_S7_L001_R1_001.fastq.gz	fastq fastq	133973234.0	626692.0	DMSO 12hpf 1 S7 L001 R1 001.fastq.gz	0:106.86 1:106.92	A:34741794;C:32048895;G:32233963;T:34368689;N:579893	106	106	34741794	32048895	32233963	34368689	579893	SRX4644418	SRS3742488	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.961	0.9606	0.0002	0.00021	0.99928	0.99928	0.47357	0.45763	74	74	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Segmentation	Embryo	Embryo Imprecise	All anatomical structures
48732	48732	SRR7789586	SRX4644417	SRS3742487	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			TDCIPP 6hpf 5 S15	strain:5D\|isolate:102\|dev stage:6 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	TDCIPP 6hpf 5 S15	TDCIPP 6hpf 5 S15	TDCIPP 6hpf 5 S15	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	TDCIPP-6hpf-5_S15_L001_R1_001.fastq.gz TDCIPP-6hpf-5_S15_L001_R2_001.fastq.gz	fastq fastq	103436592.0	515633.0	TDCIPP 6hpf 5 S15 L001 R2 001.fastq.gz	0:100.23 1:100.37	A:26213221;C:25393681;G:25395332;T:25877353;N:557005	100	100	26213221	25393681	25395332	25877353	557005	SRX4644417	SRS3742487	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.9545	0.9544	0.00043	0.0004	0.99898	0.99904	0.33908	0.3596	64	151	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Gastrula	Embryo	Embryo Imprecise	All anatomical structures
48733	48733	SRR7789587	SRX4644416	SRS3742486	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			TDCIPP 6hpf 3 S14	strain:5D\|isolate:101\|dev stage:6 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	TDCIPP 6hpf 3 S14	TDCIPP 6hpf 3 S14	TDCIPP 6hpf 3 S14	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	TDCIPP-6hpf-3_S14_L001_R1_001.fastq.gz TDCIPP-6hpf-3_S14_L001_R2_001.fastq.gz	fastq fastq	99767681.0	500238.0	TDCIPP 6hpf 3 S14 L001 R2 001.fastq.gz	0:99.64 1:99.80	A:25255312;C:24464400;G:24481390;T:25002218;N:564361	99	99	25255312	24464400	24481390	25002218	564361	SRX4644416	SRS3742486	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.96117	0.96052	0.00028	0.00028	0.99924	0.99922	0.35418	0.35375	148	149	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Gastrula	Embryo	Embryo Imprecise	All anatomical structures
48752	48752	SRR7789606	SRX4644397	SRS3742467	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			DMSO 6hpf 5 S6	strain:5D\|isolate:99\|dev stage:6 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	DMSO 6hpf 5 S6	DMSO 6hpf 5 S6	DMSO 6hpf 5 S6	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	DMSO-6hpf-5_S6_L001_R1_001.fastq.gz DMSO-6hpf-5_S6_L001_R2_001.fastq.gz	fastq fastq	107736291.0	525615.0	DMSO 6hpf 5 S6 L001 R2 001.fastq.gz	0:102.38 1:102.59	A:27251903;C:26520518;G:26567935;T:26878661;N:517274	102	102	27251903	26520518	26567935	26878661	517274	SRX4644397	SRS3742467	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.96019	0.95982	0.00045	0.00043	0.99918	0.99916	0.37174	0.3343	151	148	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Gastrula	Embryo	Embryo Imprecise	All anatomical structures
48753	48753	SRR7789607	SRX4644396	SRS3742466	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			TDCIPP 6hpf 1 S13	strain:5D\|isolate:100\|dev stage:6 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	TDCIPP 6hpf 1 S13	TDCIPP 6hpf 1 S13	TDCIPP 6hpf 1 S13	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	TDCIPP-6hpf-1_S13_L001_R2_001.fastq.gz TDCIPP-6hpf-1_S13_L001_R1_001.fastq.gz	fastq fastq	91271391.0	448917.0	TDCIPP 6hpf 1 S13 L001 R2 001.fastq.gz	0:101.61 1:101.71	A:23269221;C:22266290;G:22291849;T:22983659;N:460372	101	101	23269221	22266290	22291849	22983659	460372	SRX4644396	SRS3742466	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.96069	0.96135	0.0005	0.00051	0.99916	0.99916	0.34621	0.3774	76	76	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Gastrula	Embryo	Embryo Imprecise	All anatomical structures
48754	48754	SRR7789608	SRX4644395	SRS3742465	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			DMSO 3hpf 2 S1	strain:5D\|isolate:91\|dev stage:3 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	DMSO 3hpf 2 S1	DMSO 3hpf 2 S1	DMSO 3hpf 2 S1	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	DMSO-3hpf-2_S1_L001_R1_001.fastq.gz DMSO-3hpf-2_S1_L001_R2_001.fastq.gz	fastq fastq	143035914.0	673342.0	DMSO 3hpf 2 S1 L001 R2 001.fastq.gz	0:106.19 1:106.24	A:37104542;C:34199194;G:34286529;T:36802368;N:643281	106	106	37104542	34199194	34286529	36802368	643281	SRX4644395	SRS3742465	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.97329	0.97288	0.00018	0.00017	0.99931	0.99931	0.41042	0.4514	39	39	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Blastula	Embryo	Embryo Imprecise	All anatomical structures
48755	48755	SRR7789609	SRX4644394	SRS3742464	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			DMSO 3hpf 3 S2	strain:5D\|isolate:92\|dev stage:3 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	DMSO 3hpf 3 S2	DMSO 3hpf 3 S2	DMSO 3hpf 3 S2	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	DMSO-3hpf-3_S2_L001_R2_001.fastq.gz DMSO-3hpf-3_S2_L001_R1_001.fastq.gz	fastq fastq	121995763.0	560778.0	DMSO 3hpf 3 S2 L001 R2 001.fastq.gz	0:108.73 1:108.82	A:31569811;C:29316325;G:29402755;T:31346545;N:360327	108	108	31569811	29316325	29402755	31346545	360327	SRX4644394	SRS3742464	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.96945	0.96871	0.00029	0.00031	0.99924	0.99924	0.3498	0.37356	134	134	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Blastula	Embryo	Embryo Imprecise	All anatomical structures
48756	48756	SRR7789610	SRX4644393	SRS3742463	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			DMSO 3hpf 4 S3	strain:5D\|isolate:93\|dev stage:3 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	DMSO 3hpf 4 S3	DMSO 3hpf 4 S3	DMSO 3hpf 4 S3	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	DMSO-3hpf-4_S3_L001_R1_001.fastq.gz DMSO-3hpf-4_S3_L001_R2_001.fastq.gz	fastq fastq	131169421.0	625415.0	DMSO 3hpf 4 S3 L001 R2 001.fastq.gz	0:104.81 1:104.92	A:33973430;C:31403379;G:31490054;T:33651313;N:651245	104	104	33973430	31403379	31490054	33651313	651245	SRX4644393	SRS3742463	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.98214	0.98232	0.00039	0.00042	0.99931	0.99928	0.43853	0.43838	94	94	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Blastula	Embryo	Embryo Imprecise	All anatomical structures
48757	48757	SRR7789611	SRX4644392	SRS3742462	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			TDCIPP 3hpf 1 S10	strain:5D\|isolate:94\|dev stage:3 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	TDCIPP 3hpf 1 S10	TDCIPP 3hpf 1 S10	TDCIPP 3hpf 1 S10	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	TDCIPP-3hpf-1_S10_L001_R2_001.fastq.gz TDCIPP-3hpf-1_S10_L001_R1_001.fastq.gz	fastq fastq	142472001.0	675614.0	TDCIPP 3hpf 1 S10 L001 R2 001.fastq.gz	0:105.40 1:105.48	A:37237954;C:33780885;G:33866153;T:36894511;N:692498	105	105	37237954	33780885	33866153	36894511	692498	SRX4644392	SRS3742462	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.98448	0.98456	3e-05	5e-05	0.99928	0.99926	0.44535	0.45235	89	89	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Blastula	Embryo	Embryo Imprecise	All anatomical structures
48758	48758	SRR7789612	SRX4644391	SRS3742461	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			TDCIPP 3hpf 2 S11	strain:5D\|isolate:95\|dev stage:3 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	TDCIPP 3hpf 2 S11	TDCIPP 3hpf 2 S11	TDCIPP 3hpf 2 S11	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	TDCIPP-3hpf-2_S11_L001_R1_001.fastq.gz TDCIPP-3hpf-2_S11_L001_R2_001.fastq.gz	fastq fastq	135473127.0	649900.0	TDCIPP 3hpf 2 S11 L001 R2 001.fastq.gz	0:104.20 1:104.25	A:35005838;C:32424512;G:32538931;T:34827379;N:676467	104	104	35005838	32424512	32538931	34827379	676467	SRX4644391	SRS3742461	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.98266	0.98245	0.0	0.0	0.99933	0.99933	0.49436	0.49577	59	59	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Blastula	Embryo	Embryo Imprecise	All anatomical structures
48759	48759	SRR7789613	SRX4644390	SRS3742460	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			TDCIPP 3hpf 4 S12	strain:5D\|isolate:96\|dev stage:3 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	TDCIPP 3hpf 4 S12	TDCIPP 3hpf 4 S12	TDCIPP 3hpf 4 S12	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	TDCIPP-3hpf-4_S12_L001_R1_001.fastq.gz TDCIPP-3hpf-4_S12_L001_R2_001.fastq.gz	fastq fastq	126387362.0	600422.0	TDCIPP 3hpf 4 S12 L001 R1 001.fastq.gz	0:105.21 1:105.28	A:32731869;C:30187130;G:30351165;T:32470755;N:646443	105	105	32731869	30187130	30351165	32470755	646443	SRX4644390	SRS3742460	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.97915	0.97875	0.00012	0.00011	0.99933	0.99933	0.44431	0.44577	117	117	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Blastula	Embryo	Embryo Imprecise	All anatomical structures
48760	48760	SRR7789614	SRX4644389	SRS3742459	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			DMSO 6hpf 1 S4	strain:5D\|isolate:97\|dev stage:6 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	DMSO 6hpf 1 S4	DMSO 6hpf 1 S4	DMSO 6hpf 1 S4	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	DMSO-6hpf-1_S4_L001_R2_001.fastq.gz DMSO-6hpf-1_S4_L001_R1_001.fastq.gz	fastq fastq	95806388.0	464892.0	DMSO 6hpf 1 S4 L001 R2 001.fastq.gz	0:103.02 1:103.07	A:24562000;C:23294432;G:23307788;T:24218011;N:424157	103	103	24562000	23294432	23307788	24218011	424157	SRX4644389	SRS3742459	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.95656	0.95712	0.0004	0.00039	0.99918	0.99916	0.34071	0.34145	94	151	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Gastrula	Embryo	Embryo Imprecise	All anatomical structures
48761	48761	SRR7789615	SRX4644388	SRS3742458	SRP159670	PRJNA475635	Tris1 3 dichloro 2 propyl phosphate Exposure During Early Blastula Alters the Normal Trajectory of Zebrafish Embryogenesis	PRJNA475635	Other	The objective of this project was to rely on mRNA sequencing and amplicon sequencing to test the hypothesis that tris1 3 dichloro 2 propyl phosphate TDCIPP interferes with pathways involved in early zebrafish embryogenesis.			DMSO 6hpf 3 S5	strain:5D\|isolate:98\|dev stage:6 hpf\|sex:not applicable\|tissue:embryo\|BioSampleModel:Model organism or animal	DMSO 6hpf 3 S5	DMSO 6hpf 3 S5	DMSO 6hpf 3 S5	Nextera XT DNA Library Prep kit	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiniSeq	SRP159670	DMSO-6hpf-3_S5_L001_R1_001.fastq.gz DMSO-6hpf-3_S5_L001_R2_001.fastq.gz	fastq fastq	105210098.0	508250.0	DMSO 6hpf 3 S5 L001 R1 001.fastq.gz	0:103.44 1:103.57	A:26828273;C:25677269;G:25721655;T:26524232;N:458669	103	103	26828273	25677269	25721655	26524232	458669	SRX4644388	SRS3742458	SRA767209	University of California, Riverside\|Environmental Sciences	University of California, Riverside	2	0.95583	0.95513	0.00047	0.00045	0.99916	0.99918	0.30844	0.29023	42	42	B	B	biological fallback assumption	illumina	miseq	unknown	random_priming	nextera	bulk	unknown	unknown	United States	2018-09-05	Gastrula	Embryo	Embryo Imprecise	All anatomical structures
58873	58873	SRR11509894	SRX8082006	SRS6450124	SRP255712	PRJNA623798	Single cell lineage tracing on endogenous scarring sites scLOESS	PRJNA623798	Other	Lineage recording of zebrafish embryogenesis reveals early cell fate commitment	1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. 3 independent replicates in total.	Target specific Amplification of Single Cell cDNA Library	SCC	strain:AB line\|age:7dpf\|dev stage:larvae\|sex:not applicable\|tissue:Whole organism\|collection date:2018 07 26\|BioSampleModel:Model organism or animal	Single cell cDNA library Amplicon of zebrafish larva replicate 3	SCC replicate3	SCC replicate3	1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. PCR replicate 3.	AMPLICON	TRANSCRIPTOMIC SINGLE CELL	PCR	PAIRED	ILLUMINA	HiSeq X Ten	SRP255712	SCC-replicate3_R1.fq.gz SCC-replicate3_R2.fq.gz	fastq fastq	14811756300.0	49372521.0	SCC replicate3 R1.fq.gz	0:150 1:150	A:3255250699;C:3018244265;G:3088919277;T:5446140655;N:3201404	150	150	3255250699	3018244265	3088919277	5446140655	3201404	SRX8082006	SRS6450124	SRA1063780	Sun Yat- sen University\|Life Sicence School	Sun Yat- sen University	2	0.01015	0.97122	0.00049	0.00158	0.99841	0.97569	0.54867	0.48858	150	150	T	B	mate1 technical by mapping diff	illumina	hiseq_era	unknown	random_priming	unknown	sc	single_cell_droplet	10x	China	2020-04-10	Larval	Larval	Whole Organism	All anatomical structures
58874	58874	SRR11509895	SRX8082005	SRS6450124	SRP255712	PRJNA623798	Single cell lineage tracing on endogenous scarring sites scLOESS	PRJNA623798	Other	Lineage recording of zebrafish embryogenesis reveals early cell fate commitment	1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. 3 independent replicates in total.	Target specific Amplification of Single Cell cDNA Library	SCC	strain:AB line\|age:7dpf\|dev stage:larvae\|sex:not applicable\|tissue:Whole organism\|collection date:2018 07 26\|BioSampleModel:Model organism or animal	Single cell cDNA library Amplicon of zebrafish larva replicate 2	SCC replicate2	SCC replicate2	1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. PCR replicate 2.	AMPLICON	TRANSCRIPTOMIC SINGLE CELL	PCR	PAIRED	ILLUMINA	HiSeq X Ten	SRP255712	SCC-replicate2_R2.fq.gz SCC-replicate2_R1.fq.gz	fastq fastq	19858547700.0	66195159.0	SCC replicate2 R1.fq.gz	0:150 1:150	A:4363166112;C:4066433314;G:4155737160;T:7269480395;N:3730719	150	150	4363166112	4066433314	4155737160	7269480395	3730719	SRX8082005	SRS6450124	SRA1063780	Sun Yat- sen University\|Life Sicence School	Sun Yat- sen University	2	0.025	0.97152	0.00079	0.00143	0.99746	0.97668	0.74358	0.46727	150	150	T	B	mate1 technical by mapping diff	illumina	hiseq_era	unknown	random_priming	unknown	sc	single_cell_droplet	10x	China	2020-04-09	Larval	Larval	Whole Organism	All anatomical structures
58875	58875	SRR11509896	SRX8082004	SRS6450124	SRP255712	PRJNA623798	Single cell lineage tracing on endogenous scarring sites scLOESS	PRJNA623798	Other	Lineage recording of zebrafish embryogenesis reveals early cell fate commitment	1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. 3 independent replicates in total.	Target specific Amplification of Single Cell cDNA Library	SCC	strain:AB line\|age:7dpf\|dev stage:larvae\|sex:not applicable\|tissue:Whole organism\|collection date:2018 07 26\|BioSampleModel:Model organism or animal	Single cell cDNA library Amplicon of zebrafish larva replicate 1	SCC replicate1	SCC replicate1	1g cDNA library fetch from 10x Genomics Chromium Single Cell 3 Library was amplified by extra 15 cycles. and then split into 90 equal aliquots to amplify each target by 25 cycles and purified amplicons were pooled into an equimolar mixture. PCR replicate 1.	AMPLICON	TRANSCRIPTOMIC SINGLE CELL	PCR	PAIRED	ILLUMINA	HiSeq X Ten	SRP255712	SCC-replicate1_R1.fq.gz SCC-replicate1_R2.fq.gz	fastq fastq	18191440200.0	60638134.0	SCC replicate1 R1.fq.gz	0:150 1:150	A:3994446536;C:3726446852;G:3814798796;T:6652431833;N:3316183	150	150	3994446536	3726446852	3814798796	6652431833	3316183	SRX8082004	SRS6450124	SRA1063780	Sun Yat- sen University\|Life Sicence School	Sun Yat- sen University	2	0.03094	0.97334	0.00045	0.00127	0.99774	0.97824	0.80981	0.45378	150	150	T	B	mate1 technical by mapping diff	illumina	hiseq_era	unknown	random_priming	unknown	sc	single_cell_droplet	10x	China	2020-04-09	Larval	Larval	Whole Organism	All anatomical structures
62308	62308	SRR13190536	SRX9625062	SRS7826258	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 6F	C03 6F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 6F	C03 6F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_6F_E37_225_R1.fastq.gz C03_6F_E37_225_R2.fastq.gz	fastq fastq	35763616.0	59408.0	C03 6F E37 225 R1.fastq.gz	0:301 1:301	A:9029678;C:8898456;G:8511578;T:9323840;N:64	301	301	9029678	8898456	8511578	9323840	64	SRX9625062	SRS7826258	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62309	62309	SRR13190537	SRX9625061	SRS7826257	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 5M	C03 5M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 5M	C03 5M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_5M_E37_230_R1.fastq.gz C03_5M_E37_230_R2.fastq.gz	fastq fastq	39170334.0	65067.0	C03 5M E37 230 R1.fastq.gz	0:301 1:301	A:9414891;C:10269665;G:9759519;T:9726159;N:100	301	301	9414891	10269665	9759519	9726159	100	SRX9625061	SRS7826257	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	2e-05	0.0	1e-05	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62310	62310	SRR13190538	SRX9625060	SRS7826256	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 5F	C03 5F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 5F	C03 5F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_5F_E37_224_R1.fastq.gz C03_5F_E37_224_R2.fastq.gz	fastq fastq	34138818.0	56709.0	C03 5F E37 224 R1.fastq.gz	0:301 1:301	A:8590923;C:8531890;G:8159072;T:8856765;N:168	301	301	8590923	8531890	8159072	8856765	168	SRX9625060	SRS7826256	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62311	62311	SRR13190539	SRX9625059	SRS7826255	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 4F	C03 4F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 4F	C03 4F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_4F_E37_223_R1.fastq.gz C03_4F_E37_223_R2.fastq.gz	fastq fastq	26582514.0	44157.0	C03 4F E37 223 R1.fastq.gz	0:301 1:301	A:6082846;C:7306041;G:6930703;T:6262863;N:61	301	301	6082846	7306041	6930703	6262863	61	SRX9625059	SRS7826255	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62312	62312	SRR13190540	SRX9625058	SRS7826254	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 3M	C03 3M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 3M	C03 3M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_3M_E37_228_R1.fastq.gz C03_3M_E37_228_R2.fastq.gz	fastq fastq	32995620.0	54810.0	C03 3M E37 228 R1.fastq.gz	0:301 1:301	A:7367616;C:9186385;G:8768695;T:7672916;N:8	301	301	7367616	9186385	8768695	7672916	8	SRX9625058	SRS7826254	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	2e-05	3e-05	1e-05	2e-05	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62313	62313	SRR13190541	SRX9625057	SRS7826253	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 3F	C03 3F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 3F	C03 3F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_3F_E37_222_R1.fastq.gz C03_3F_E37_222_R2.fastq.gz	fastq fastq	31568278.0	52439.0	C03 3F E37 222 R1.fastq.gz	0:301 1:301	A:7933526;C:7897232;G:7546800;T:8190713;N:7	301	301	7933526	7897232	7546800	8190713	7	SRX9625057	SRS7826253	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62314	62314	SRR13190542	SRX9625056	SRS7826252	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 2M	C03 2M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 2M	C03 2M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_2M_E37_227_R1.fastq.gz C03_2M_E37_227_R2.fastq.gz	fastq fastq	42783538.0	71069.0	C03 2M E37 227 R1.fastq.gz	0:301 1:301	A:9765039;C:11749187;G:11137288;T:10131989;N:35	301	301	9765039	11749187	11137288	10131989	35	SRX9625056	SRS7826252	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	2e-05	0.0	0.0	0.0	0.99997	1.0	0.0		301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62315	62315	SRR13190543	SRX9625055	SRS7826251	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 2F	C03 2F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 2F	C03 2F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_2F_E37_221_R1.fastq.gz C03_2F_E37_221_R2.fastq.gz	fastq fastq	28485436.0	47318.0	C03 2F E37 221 R1.fastq.gz	0:301 1:301	A:6426581;C:7909072;G:7491919;T:6657804;N:60	301	301	6426581	7909072	7491919	6657804	60	SRX9625055	SRS7826251	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	7e-05	8e-05	4e-05	7e-05	0.99997	1.0	0.0		301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62316	62316	SRR13190544	SRX9625054	SRS7826250	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 1M	C03 1M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 1M	C03 1M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_1M_E37_226_R1.fastq.gz C03_1M_E37_226_R2.fastq.gz	fastq fastq	23402148.0	38874.0	C03 1M E37 226 R1.fastq.gz	0:301 1:301	A:5618166;C:6125695;G:5821344;T:5836756;N:187	301	301	5618166	6125695	5821344	5836756	187	SRX9625054	SRS7826250	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62317	62317	SRR13190545	SRX9625053	SRS7826249	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C03 1F	C03 1F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C03 1F	C03 1F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C03_1F_E37_220_R1.fastq.gz C03_1F_E37_220_R2.fastq.gz	fastq fastq	31665200.0	52600.0	C03 1F E37 220 R1.fastq.gz	0:301 1:301	A:7448421;C:8449694;G:8003786;T:7762994;N:305	301	301	7448421	8449694	8003786	7762994	305	SRX9625053	SRS7826249	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62318	62318	SRR13190546	SRX9625052	SRS7826248	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi dmso 3c	mi dmso 3c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi dmso 3c	mi dmso 3c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-DMSO-3c_S169_L001_R1_001.fastq.gz mi-DMSO-3c_S169_L001_R2_001.fastq.gz	fastq fastq	36793460.0	61216.0	mi DMSO 3c S169 L001 R1 001.fastq.gz	0:300.50 1:300.55	A:8657651;C:9730592;G:9252832;T:9148483;N:3902	300	300	8657651	9730592	9252832	9148483	3902	SRX9625052	SRS7826248	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			298	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62319	62319	SRR13190547	SRX9625051	SRS7826247	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 6M	C003 6M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 6M	C003 6M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_6M_E37_219_R1.fastq.gz C003_6M_E37_219_R2.fastq.gz	fastq fastq	34348916.0	57058.0	C003 6M E37 219 R1.fastq.gz	0:301 1:301	A:7854162;C:9466965;G:8942055;T:8085380;N:354	301	301	7854162	9466965	8942055	8085380	354	SRX9625051	SRS7826247	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62320	62320	SRR13190548	SRX9625050	SRS7826245	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 6F	C003 6F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 6F	C003 6F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_6F_E37_213_R1.fastq.gz C003_6F_E37_213_R2.fastq.gz	fastq fastq	33217156.0	55178.0	C003 6F E37 213 R1.fastq.gz	0:301 1:301	A:7984190;C:8678795;G:8293257;T:8260864;N:50	301	301	7984190	8678795	8293257	8260864	50	SRX9625050	SRS7826245	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62321	62321	SRR13190549	SRX9625049	SRS7826246	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 5F	C003 5F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 5F	C003 5F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_5F_E37_212_R1.fastq.gz C003_5F_E37_212_R2.fastq.gz	fastq fastq	32279842.0	53621.0	C003 5F E37 212 R1.fastq.gz	0:301 1:301	A:7391913;C:8803622;G:8385323;T:7698885;N:99	301	301	7391913	8803622	8385323	7698885	99	SRX9625049	SRS7826246	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62322	62322	SRR13190550	SRX9625048	SRS7826244	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 4M	C003 4M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 4M	C003 4M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_4M_E37_217_R1.fastq.gz C003_4M_E37_217_R2.fastq.gz	fastq fastq	29091650.0	48325.0	C003 4M E37 217 R1.fastq.gz	0:301 1:301	A:6414899;C:8113691;G:7810357;T:6752548;N:155	301	301	6414899	8113691	7810357	6752548	155	SRX9625048	SRS7826244	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62323	62323	SRR13190551	SRX9625047	SRS7826243	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 4F	C003 4F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 4F	C003 4F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_4F_E37_211_R1.fastq.gz C003_4F_E37_211_R2.fastq.gz	fastq fastq	36166956.0	60078.0	C003 4F E37 211 R1.fastq.gz	0:301 1:301	A:9364951;C:8583771;G:8096060;T:10122030;N:144	301	301	9364951	8583771	8096060	10122030	144	SRX9625047	SRS7826243	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	2e-05	2e-05	1e-05	1e-05	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62324	62324	SRR13190552	SRX9625046	SRS7826242	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 3M	C003 3M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 3M	C003 3M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_3M_E37_216_R1.fastq.gz C003_3M_E37_216_R2.fastq.gz	fastq fastq	32724720.0	54360.0	C003 3M E37 216 R1.fastq.gz	0:301 1:301	A:7368104;C:9093247;G:8586364;T:7676943;N:62	301	301	7368104	9093247	8586364	7676943	62	SRX9625046	SRS7826242	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	6e-05	7e-05	5e-05	6e-05	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62325	62325	SRR13190553	SRX9625045	SRS7826241	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 3F	C003 3F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 3F	C003 3F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_3F_E37_210_R1.fastq.gz C003_3F_E37_210_R2.fastq.gz	fastq fastq	41061216.0	68208.0	C003 3F E37 210 R1.fastq.gz	0:301 1:301	A:9828974;C:10742677;G:10268095;T:10221288;N:182	301	301	9828974	10742677	10268095	10221288	182	SRX9625045	SRS7826241	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	2e-05	2e-05	1e-05	1e-05	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62326	62326	SRR13190554	SRX9625044	SRS7826240	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 2M	C003 2M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 2M	C003 2M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_2M_E37_215_R1.fastq.gz C003_2M_E37_215_R2.fastq.gz	fastq fastq	31199854.0	51827.0	C003 2M E37 215 R1.fastq.gz	0:301 1:301	A:7022763;C:8640470;G:8225321;T:7311300;N:0	301	301	7022763	8640470	8225321	7311300	0	SRX9625044	SRS7826240	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62327	62327	SRR13190555	SRX9625043	SRS7826239	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 2F	C003 2F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 2F	C003 2F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_2F_E37_209_R1.fastq.gz C003_2F_E37_209_R2.fastq.gz	fastq fastq	40985966.0	68083.0	C003 2F E37 209 R1.fastq.gz	0:301 1:301	A:10199784;C:10325052;G:9831379;T:10629706;N:45	301	301	10199784	10325052	9831379	10629706	45	SRX9625043	SRS7826239	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62328	62328	SRR13190556	SRX9625042	SRS7826238	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 1M	C003 1M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 1M	C003 1M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_1M_E37_214_R1.fastq.gz C003_1M_E37_214_R2.fastq.gz	fastq fastq	31483396.0	52298.0	C003 1M E37 214 R1.fastq.gz	0:301 1:301	A:7426203;C:8323982;G:7893518;T:7839643;N:50	301	301	7426203	8323982	7893518	7839643	50	SRX9625042	SRS7826238	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	5e-05	5e-05	0.0	0.0	0.99997	0.99997	0.0	0.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62329	62329	SRR13190557	SRX9625041	SRS7826237	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi dmso 2c	mi dmso 2c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi dmso 2c	mi dmso 2c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-DMSO-2c_S168_L001_R1_001.fastq.gz mi-DMSO-2c_S168_L001_R2_001.fastq.gz	fastq fastq	36427672.0	60588.0	mi DMSO 2c S168 L001 R1 001.fastq.gz	0:300.68 1:300.56	A:8413051;C:9791649;G:9241827;T:8976316;N:4829	300	300	8413051	9791649	9241827	8976316	4829	SRX9625041	SRS7826237	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	8e-05	7e-05	1e-05	2e-05	0.99995	0.99995	0.5	0.5	300	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62330	62330	SRR13190558	SRX9625040	SRS7826236	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		C003 1F	C003 1F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	C003 1F	C003 1F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	C003_1F_E37_208_R1.fastq.gz C003_1F_E37_208_R2.fastq.gz	fastq fastq	36585948.0	60774.0	C003 1F E37 208 R1.fastq.gz	0:301 1:301	A:9052714;C:9299071;G:8884496;T:9349587;N:80	301	301	9052714	9299071	8884496	9349587	80	SRX9625040	SRS7826236	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62331	62331	SRR13190559	SRX9625039	SRS7826235	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 6M	DMSO 6M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 6M	DMSO 6M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_6M_E37_207_R1.fastq.gz DMSO_6M_E37_207_R2.fastq.gz	fastq fastq	51547454.0	85627.0	DMSO 6M E37 207 R1.fastq.gz	0:301 1:301	A:11934088;C:13948314;G:13252725;T:12412213;N:114	301	301	11934088	13948314	13252725	12412213	114	SRX9625039	SRS7826235	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62332	62332	SRR13190560	SRX9625038	SRS7826233	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 6F	DMSO 6F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 6F	DMSO 6F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_6F_E37_201_R1.fastq.gz DMSO_6F_E37_201_R2.fastq.gz	fastq fastq	36691298.0	60949.0	DMSO 6F E37 201 R1.fastq.gz	0:301 1:301	A:9090570;C:9314721;G:8909274;T:9376685;N:48	301	301	9090570	9314721	8909274	9376685	48	SRX9625038	SRS7826233	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62333	62333	SRR13190561	SRX9625037	SRS7826234	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 5M	DMSO 5M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 5M	DMSO 5M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_5M_E37_206_R1.fastq.gz DMSO_5M_E37_206_R2.fastq.gz	fastq fastq	30948218.0	51409.0	DMSO 5M E37 206 R1.fastq.gz	0:301 1:301	A:6889448;C:8609575;G:8209346;T:7239807;N:42	301	301	6889448	8609575	8209346	7239807	42	SRX9625037	SRS7826234	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	5e-05	5e-05	2e-05	2e-05	0.99997	0.99997	1.0	1.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62334	62334	SRR13190562	SRX9625036	SRS7826232	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 5F	DMSO 5F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 5F	DMSO 5F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_5F_E37_200_R1.fastq.gz DMSO_5F_E37_200_R2.fastq.gz	fastq fastq	46246242.0	76821.0	DMSO 5F E37 200 R1.fastq.gz	0:301 1:301	A:10199838;C:12919200;G:12255056;T:10871994;N:154	301	301	10199838	12919200	12255056	10871994	154	SRX9625036	SRS7826232	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	7e-05	7e-05	0.0	0.0	0.99997	0.99997	1.0	1.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62335	62335	SRR13190563	SRX9625035	SRS7826231	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 4M	DMSO 4M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 4M	DMSO 4M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_4M_E37_205_R1.fastq.gz DMSO_4M_E37_205_R2.fastq.gz	fastq fastq	27305516.0	45358.0	DMSO 4M E37 205 R1.fastq.gz	0:301 1:301	A:6164404;C:7424580;G:7202483;T:6513772;N:277	301	301	6164404	7424580	7202483	6513772	277	SRX9625035	SRS7826231	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62336	62336	SRR13190564	SRX9625034	SRS7826229	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 4F	DMSO 4F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 4F	DMSO 4F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_4F_E37_199_R1.fastq.gz DMSO_4F_E37_199_R2.fastq.gz	fastq fastq	36569694.0	60747.0	DMSO 4F E37 199 R1.fastq.gz	0:301 1:301	A:8866055;C:9480494;G:9058523;T:9164379;N:243	301	301	8866055	9480494	9058523	9164379	243	SRX9625034	SRS7826229	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62337	62337	SRR13190565	SRX9625033	SRS7826230	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 3M	DMSO 3M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 3M	DMSO 3M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_3M_E37_204_R1.fastq.gz DMSO_3M_E37_204_R2.fastq.gz	fastq fastq	31797640.0	52820.0	DMSO 3M E37 204 R1.fastq.gz	0:301 1:301	A:7812674;C:8131250;G:7756251;T:8097360;N:105	301	301	7812674	8131250	7756251	8097360	105	SRX9625033	SRS7826230	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62338	62338	SRR13190566	SRX9625032	SRS7826228	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 3F	DMSO 3F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 3F	DMSO 3F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_3F_E37_198_R1.fastq.gz DMSO_3F_E37_198_R2.fastq.gz	fastq fastq	32583250.0	54125.0	DMSO 3F E37 198 R1.fastq.gz	0:301 1:301	A:7996752;C:8350005;G:7984089;T:8252342;N:62	301	301	7996752	8350005	7984089	8252342	62	SRX9625032	SRS7826228	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62339	62339	SRR13190567	SRX9625031	SRS7826226	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 2M	DMSO 2M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 2M	DMSO 2M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_2M_E37_203_R1.fastq.gz DMSO_2M_E37_203_R2.fastq.gz	fastq fastq	34155072.0	56736.0	DMSO 2M E37 203 R1.fastq.gz	0:301 1:301	A:7563422;C:9447002;G:9146584;T:7998007;N:57	301	301	7563422	9447002	9146584	7998007	57	SRX9625031	SRS7826226	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62340	62340	SRR13190568	SRX9625030	SRS7826227	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi dmso 1c	mi dmso 1c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi dmso 1c	mi dmso 1c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-DMSO-1c_S167_L001_R1_001.fastq.gz mi-DMSO-1c_S167_L001_R2_001.fastq.gz	fastq fastq	31956049.0	53168.0	mi DMSO 1c S167 L001 R1 001.fastq.gz	0:300.51 1:300.53	A:7523962;C:8453666;G:8037794;T:7937020;N:3607	300	300	7523962	8453666	8037794	7937020	3607	SRX9625030	SRS7826227	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.00023	0.00024	0.00012	0.00018	0.99989	0.99995	0.6	0.5	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62341	62341	SRR13190569	SRX9625029	SRS7826225	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		DMSO 1M	DMSO 1M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	DMSO 1M	DMSO 1M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	DMSO_1M_E37_202_R1.fastq.gz DMSO_1M_E37_202_R2.fastq.gz	fastq fastq	38375092.0	63746.0	DMSO 1M E37 202 R1.fastq.gz	0:301 1:301	A:9370588;C:9885537;G:9436659;T:9682197;N:111	301	301	9370588	9885537	9436659	9682197	111	SRX9625029	SRS7826225	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62342	62342	SRR13190570	SRX9625028	SRS7826224	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 6F	blank 6F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 6F	blank 6F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_6F_E37_189_R1.fastq.gz Blank_6F_E37_189_R2.fastq.gz	fastq fastq	26421780.0	43890.0	Blank 6F E37 189 R1.fastq.gz	0:301 1:301	A:6686571;C:6484336;G:6150644;T:7100156;N:73	301	301	6686571	6484336	6150644	7100156	73	SRX9625028	SRS7826224	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	8e-05	6e-05	0.0	0.0	0.99995	0.99997	1.0	1.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62343	62343	SRR13190571	SRX9625027	SRS7826222	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 5M	blank 5M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 5M	blank 5M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_5M_E37_194_R1.fastq.gz Blank_5M_E37_194_R2.fastq.gz	fastq fastq	29646694.0	49247.0	Blank 5M E37 194 R1.fastq.gz	0:301 1:301	A:6812974;C:8033039;G:7673447;T:7127199;N:35	301	301	6812974	8033039	7673447	7127199	35	SRX9625027	SRS7826222	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62344	62344	SRR13190572	SRX9625026	SRS7826223	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 5F	blank 5F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 5F	blank 5F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_5F_E37_188_R1.fastq.gz Blank_5F_E37_188_R2.fastq.gz	fastq fastq	28918274.0	48037.0	Blank 5F E37 188 R1.fastq.gz	0:301 1:301	A:7132551;C:7375354;G:7052114;T:7358222;N:33	301	301	7132551	7375354	7052114	7358222	33	SRX9625026	SRS7826223	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62345	62345	SRR13190573	SRX9625025	SRS7826221	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 4M	blank 4M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 4M	blank 4M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_4M_E37_193_R1.fastq.gz Blank_4M_E37_193_R2.fastq.gz	fastq fastq	26524722.0	44061.0	Blank 4M E37 193 R1.fastq.gz	0:301 1:301	A:6673216;C:6631706;G:6339190;T:6880594;N:16	301	301	6673216	6631706	6339190	6880594	16	SRX9625025	SRS7826221	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62346	62346	SRR13190574	SRX9625024	SRS7826219	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 4F	blank 4F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 4F	blank 4F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_4F_E37_187_R1.fastq.gz Blank_4F_E37_187_R2.fastq.gz	fastq fastq	38795288.0	64444.0	Blank 4F E37 187 R1.fastq.gz	0:301 1:301	A:9759083;C:9685902;G:9239573;T:10110589;N:141	301	301	9759083	9685902	9239573	10110589	141	SRX9625024	SRS7826219	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62347	62347	SRR13190575	SRX9625023	SRS7826220	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 3M	blank 3M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 3M	blank 3M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_3M_E37_192_R1.fastq.gz Blank_3M_E37_192_R2.fastq.gz	fastq fastq	31511088.0	52344.0	Blank 3M E37 192 R1.fastq.gz	0:301 1:301	A:7890679;C:7918519;G:7565798;T:8136001;N:91	301	301	7890679	7918519	7565798	8136001	91	SRX9625023	SRS7826220	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62348	62348	SRR13190576	SRX9625022	SRS7826218	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 3F	blank 3F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 3F	blank 3F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_3F_E37_186_R1.fastq.gz Blank_3F_E37_186_R2.fastq.gz	fastq fastq	25573562.0	42481.0	Blank 3F E37 186 R1.fastq.gz	0:301 1:301	A:6385726;C:6436253;G:6152632;T:6598801;N:150	301	301	6385726	6436253	6152632	6598801	150	SRX9625022	SRS7826218	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62349	62349	SRR13190577	SRX9625021	SRS7826217	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 2M	blank 2M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 2M	blank 2M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_2M_E37_191_R1.fastq.gz Blank_2M_E37_191_R2.fastq.gz	fastq fastq	24893302.0	41351.0	Blank 2M E37 191 R1.fastq.gz	0:301 1:301	A:5554054;C:6920587;G:6572099;T:5846431;N:131	301	301	5554054	6920587	6572099	5846431	131	SRX9625021	SRS7826217	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62350	62350	SRR13190578	SRX9625020	SRS7826216	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 2F	blank 2F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 2F	blank 2F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_2F_E37_185_R1.fastq.gz Blank_2F_E37_185_R2.fastq.gz	fastq fastq	33106388.0	54994.0	Blank 2F E37 185 R1.fastq.gz	0:301 1:301	A:8210126;C:8399856;G:8023170;T:8473136;N:100	301	301	8210126	8399856	8023170	8473136	100	SRX9625020	SRS7826216	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62351	62351	SRR13190579	SRX9625019	SRS7826215	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi co 7c	mi co 7c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi co 7c	mi co 7c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-co-7c_S166_L001_R1_001.fastq.gz mi-co-7c_S166_L001_R2_001.fastq.gz	fastq fastq	39583092.0	65844.0	mi co 7c S166 L001 R1 001.fastq.gz	0:300.61 1:300.55	A:9371875;C:10446943;G:9974266;T:9784439;N:5569	300	300	9371875	10446943	9974266	9784439	5569	SRX9625019	SRS7826215	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62352	62352	SRR13190580	SRX9625018	SRS7826214	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 1M	blank 1M	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 1M	blank 1M	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_1M_E37_190_R1.fastq.gz Blank_1M_E37_190_R2.fastq.gz	fastq fastq	31827740.0	52870.0	Blank 1M E37 190 R1.fastq.gz	0:301 1:301	A:7071377;C:8855555;G:8444373;T:7456384;N:51	301	301	7071377	8855555	8444373	7456384	51	SRX9625018	SRS7826214	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62353	62353	SRR13190581	SRX9625017	SRS7826213	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		blank 1F	blank 1F	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:4 month\|dev stage:4 month\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	blank 1F	blank 1F	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	Blank_1F_E37_184_R1.fastq.gz Blank_1F_E37_184_R2.fastq.gz	fastq fastq	38346798.0	63699.0	Blank 1F E37 184 R1.fastq.gz	0:301 1:301	A:9578697;C:9626806;G:9160191;T:9980958;N:146	301	301	9578697	9626806	9160191	9980958	146	SRX9625017	SRS7826213	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62354	62354	SRR13190582	SRX9625016	SRS7826212	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 300 9c	mi 300 9c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 300 9c	mi 300 9c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-300-9c_S217_L001_R1_001.fastq.gz mi-300-9c_S217_L001_R2_001.fastq.gz	fastq fastq	15118420.0	25145.0	mi 300 9c S217 L001 R1 001.fastq.gz	0:300.70 1:300.55	A:3570254;C:3998102;G:3797490;T:3749498;N:3076	300	300	3570254	3998102	3797490	3749498	3076	SRX9625016	SRS7826212	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62355	62355	SRR13190583	SRX9625015	SRS7826211	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 300 8c	mi 300 8c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 300 8c	mi 300 8c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-300-8c_S216_L001_R1_001.fastq.gz mi-300-8c_S216_L001_R2_001.fastq.gz	fastq fastq	34271314.0	57009.0	mi 300 8c S216 L001 R1 001.fastq.gz	0:300.61 1:300.54	A:8181110;C:8970816;G:8549963;T:8566222;N:3203	300	300	8181110	8970816	8549963	8566222	3203	SRX9625015	SRS7826211	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62356	62356	SRR13190584	SRX9625014	SRS7826210	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 300 5c	mi 300 5c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 300 5c	mi 300 5c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-300-5c_S215_L001_R1_001.fastq.gz mi-300-5c_S215_L001_R2_001.fastq.gz	fastq fastq	30796965.0	51230.0	mi 300 5c S215 L001 R1 001.fastq.gz	0:300.61 1:300.54	A:7377300;C:8042585;G:7678452;T:7694875;N:3753	300	300	7377300	8042585	7678452	7694875	3753	SRX9625014	SRS7826210	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62357	62357	SRR13190585	SRX9625013	SRS7826209	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 300 4c	mi 300 4c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 300 4c	mi 300 4c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-300-4c_S214_L001_R1_001.fastq.gz mi-300-4c_S214_L001_R2_001.fastq.gz	fastq fastq	35449204.0	58966.0	mi 300 4c S214 L001 R1 001.fastq.gz	0:300.63 1:300.55	A:8176902;C:9623359;G:9124943;T:8520004;N:3996	300	300	8176902	9623359	9124943	8520004	3996	SRX9625013	SRS7826209	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62358	62358	SRR13190586	SRX9625012	SRS7826208	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 300 3c	mi 300 3c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 300 3c	mi 300 3c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-300-3c_S213_L001_R1_001.fastq.gz mi-300-3c_S213_L001_R2_001.fastq.gz	fastq fastq	21816410.0	36297.0	mi 300 3c S213 L001 R1 001.fastq.gz	0:300.53 1:300.53	A:5258308;C:5665372;G:5418589;T:5471412;N:2729	300	300	5258308	5665372	5418589	5471412	2729	SRX9625012	SRS7826208	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	300	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62359	62359	SRR13190587	SRX9625011	SRS7826207	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 300 2c	mi 300 2c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 300 2c	mi 300 2c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-300-2c_S212_L001_R1_001.fastq.gz mi-300-2c_S212_L001_R2_001.fastq.gz	fastq fastq	31466950.0	52343.0	mi 300 2c S212 L001 R1 001.fastq.gz	0:300.64 1:300.53	A:7549460;C:8212967;G:7836584;T:7863423;N:4516	300	300	7549460	8212967	7836584	7863423	4516	SRX9625011	SRS7826207	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62360	62360	SRR13190588	SRX9625010	SRS7826206	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 300 1c	mi 300 1c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 300 1c	mi 300 1c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-300-1c_S211_L001_R1_001.fastq.gz mi-300-1c_S211_L001_R2_001.fastq.gz	fastq fastq	33845114.0	56300.0	mi 300 1c S211 L001 R1 001.fastq.gz	0:300.63 1:300.53	A:8046759;C:8895401;G:8501396;T:8398598;N:2960	300	300	8046759	8895401	8501396	8398598	2960	SRX9625010	SRS7826206	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	300	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62361	62361	SRR13190589	SRX9625009	SRS7826205	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 100 8c	mi 100 8c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 100 8c	mi 100 8c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-100-8c_S210_L001_R1_001.fastq.gz mi-100-8c_S210_L001_R2_001.fastq.gz	fastq fastq	31049048.0	51630.0	mi 100 8c S210 L001 R1 001.fastq.gz	0:300.82 1:300.55	A:6930066;C:8611493;G:8134054;T:7370011;N:3424	300	300	6930066	8611493	8134054	7370011	3424	SRX9625009	SRS7826205	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	5e-05	0.0	4e-05	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62362	62362	SRR13190590	SRX9625008	SRS7826204	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi co 6c	mi co 6c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi co 6c	mi co 6c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-co-6c_S165_L001_R1_001.fastq.gz mi-co-6c_S165_L001_R2_001.fastq.gz	fastq fastq	34553246.0	57506.0	mi co 6c S165 L001 R1 001.fastq.gz	0:300.33 1:300.53	A:8191935;C:9134036;G:8690693;T:8533133;N:3449	300	300	8191935	9134036	8690693	8533133	3449	SRX9625008	SRS7826204	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62363	62363	SRR13190591	SRX9625007	SRS7826202	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 100 7c	mi 100 7c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 100 7c	mi 100 7c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-100-7c_S209_L001_R1_001.fastq.gz mi-100-7c_S209_L001_R2_001.fastq.gz	fastq fastq	40857616.0	67945.0	mi 100 7c S209 L001 R1 001.fastq.gz	0:300.78 1:300.56	A:9272308;C:11164756;G:10545260;T:9871084;N:4208	300	300	9272308	11164756	10545260	9871084	4208	SRX9625007	SRS7826202	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.00023	0.00023	0.00014	0.00014	0.99991	0.99993	0.4	0.25	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62364	62364	SRR13190592	SRX9625006	SRS7826203	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 100 6c	mi 100 6c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 100 6c	mi 100 6c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-100-6c_S208_L001_R1_001.fastq.gz mi-100-6c_S208_L001_R2_001.fastq.gz	fastq fastq	42276875.0	70305.0	mi 100 6c S208 L001 R1 001.fastq.gz	0:300.76 1:300.57	A:9676285;C:11451587;G:10795438;T:10348872;N:4693	300	300	9676285	11451587	10795438	10348872	4693	SRX9625006	SRS7826203	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	5e-05	4e-05	1e-05	0.0	0.99995	0.99995	1.0	1.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62365	62365	SRR13190593	SRX9625005	SRS7826201	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 100 5c	mi 100 5c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 100 5c	mi 100 5c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-100-5c_S207_L001_R1_001.fastq.gz mi-100-5c_S207_L001_R2_001.fastq.gz	fastq fastq	35463732.0	58966.0	mi 100 5c S207 L001 R1 001.fastq.gz	0:300.87 1:300.56	A:7896890;C:9863610;G:9304378;T:8394197;N:4657	300	300	7896890	9863610	9304378	8394197	4657	SRX9625005	SRS7826201	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	4e-05	3e-05	0.0	0.0	0.99995	0.99997	0.0	0.0	301	297	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62366	62366	SRR13190594	SRX9625004	SRS7826200	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 100 4c	mi 100 4c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 100 4c	mi 100 4c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-100-4c_S206_L001_R1_001.fastq.gz mi-100-4c_S206_L001_R2_001.fastq.gz	fastq fastq	32775303.0	54506.0	mi 100 4c S206 L001 R1 001.fastq.gz	0:300.75 1:300.57	A:7503366;C:8884076;G:8382026;T:8000661;N:5174	300	300	7503366	8884076	8382026	8000661	5174	SRX9625004	SRS7826200	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.00019	0.00022	0.0001	0.00011	0.99993	0.99993	0.5	0.5	299	300	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62367	62367	SRR13190595	SRX9625003	SRS7826199	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 100 3c	mi 100 3c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 100 3c	mi 100 3c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-100-3c_S205_L001_R1_001.fastq.gz mi-100-3c_S205_L001_R2_001.fastq.gz	fastq fastq	31698318.0	52715.0	mi 100 3c S205 L001 R1 001.fastq.gz	0:300.74 1:300.57	A:7289905;C:8547374;G:8042066;T:7814767;N:4206	300	300	7289905	8547374	8042066	7814767	4206	SRX9625003	SRS7826199	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	5e-05	3e-05	4e-05	2e-05	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62368	62368	SRR13190596	SRX9625002	SRS7826198	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 100 2c	mi 100 2c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 100 2c	mi 100 2c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-100-2c_S204_L001_R1_001.fastq.gz mi-100-2c_S204_L001_R2_001.fastq.gz	fastq fastq	35890910.0	59687.0	mi 100 2c S204 L001 R1 001.fastq.gz	0:300.75 1:300.57	A:8247097;C:9687492;G:9132024;T:8818826;N:5471	300	300	8247097	9687492	9132024	8818826	5471	SRX9625002	SRS7826198	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	8e-05	5e-05	3e-05	2e-05	0.99995	0.99997	0.0	0.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62369	62369	SRR13190597	SRX9625001	SRS7826197	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 100 1c	mi 100 1c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 100 1c	mi 100 1c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-100-1c_S203_L001_R1_001.fastq.gz mi-100-1c_S203_L001_R2_001.fastq.gz	fastq fastq	31040383.0	51620.0	mi 100 1c S203 L001 R1 001.fastq.gz	0:300.76 1:300.57	A:7127416;C:8386893;G:7902442;T:7619812;N:3820	300	300	7127416	8386893	7902442	7619812	3820	SRX9625001	SRS7826197	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.00018	0.00016	0.0001	0.00012	0.99993	0.99997	0.66666	1.0	300	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62370	62370	SRR13190598	SRX9625000	SRS7826196	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 30 9c	mi 30 9c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 30 9c	mi 30 9c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-30-9c_S202_L001_R1_001.fastq.gz mi-30-9c_S202_L001_R2_001.fastq.gz	fastq fastq	27380655.0	45550.0	mi 30 9c S202 L001 R1 001.fastq.gz	0:300.57 1:300.54	A:6479052;C:7224638;G:6854055;T:6820478;N:2432	300	300	6479052	7224638	6854055	6820478	2432	SRX9625000	SRS7826196	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62371	62371	SRR13190599	SRX9624999	SRS7826195	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 30 7c	mi 30 7c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 30 7c	mi 30 7c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-30-7c_S201_L001_R1_001.fastq.gz mi-30-7c_S201_L001_R2_001.fastq.gz	fastq fastq	34182808.0	56891.0	mi 30 7c S201 L001 R1 001.fastq.gz	0:300.38 1:300.46	A:8330753;C:8778332;G:8393902;T:8675118;N:4703	300	300	8330753	8778332	8393902	8675118	4703	SRX9624999	SRS7826195	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62372	62372	SRR13190600	SRX9624998	SRS7826194	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 30 6c	mi 30 6c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 30 6c	mi 30 6c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-30-6c_S200_L001_R1_001.fastq.gz mi-30-6c_S200_L001_R2_001.fastq.gz	fastq fastq	36209008.0	60237.0	mi 30 6c S200 L001 R1 001.fastq.gz	0:300.58 1:300.53	A:8464441;C:9665882;G:9157291;T:8918247;N:3147	300	300	8464441	9665882	9157291	8918247	3147	SRX9624998	SRS7826194	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0002	0.00022	7e-05	6e-05	0.99991	0.99991	0.83333	0.83333	299	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62373	62373	SRR13190601	SRX9624997	SRS7826193	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi co 5c	mi co 5c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi co 5c	mi co 5c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-co-5c_S164_L001_R1_001.fastq.gz mi-co-5c_S164_L001_R2_001.fastq.gz	fastq fastq	36064636.0	60017.0	mi co 5c S164 L001 R1 001.fastq.gz	0:300.39 1:300.51	A:8739760;C:9315140;G:8892180;T:9112267;N:5289	300	300	8739760	9315140	8892180	9112267	5289	SRX9624997	SRS7826193	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	6e-05	5e-05	1e-05	0.0	0.99995	0.99995	0.0	0.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62374	62374	SRR13190602	SRX9624996	SRS7826192	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 30 5c	mi 30 5c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 30 5c	mi 30 5c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-30-5c_S199_L001_R1_001.fastq.gz mi-30-5c_S199_L001_R2_001.fastq.gz	fastq fastq	37276469.0	61995.0	mi 30 5c S199 L001 R1 001.fastq.gz	0:300.74 1:300.54	A:8134129;C:10546192;G:9978698;T:8612107;N:5343	300	300	8134129	10546192	9978698	8612107	5343	SRX9624996	SRS7826192	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62375	62375	SRR13190603	SRX9624995	SRS7826191	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 30 4c	mi 30 4c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 30 4c	mi 30 4c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-30-4c_S198_L001_R1_001.fastq.gz mi-30-4c_S198_L001_R2_001.fastq.gz	fastq fastq	30456423.0	50649.0	mi 30 4c S198 L001 R1 001.fastq.gz	0:300.78 1:300.55	A:6837814;C:8425449;G:7876030;T:7313608;N:3522	300	300	6837814	8425449	7876030	7313608	3522	SRX9624995	SRS7826191	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	7e-05	0.0001	2e-05	3e-05	0.99995	0.99995	1.0	1.0	301	298	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62376	62376	SRR13190604	SRX9624994	SRS7826190	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 30 3c	mi 30 3c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 30 3c	mi 30 3c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-30-3c_S197_L001_R1_001.fastq.gz mi-30-3c_S197_L001_R2_001.fastq.gz	fastq fastq	31592321.0	52563.0	mi 30 3c S197 L001 R1 001.fastq.gz	0:300.51 1:300.53	A:7584672;C:8230512;G:7863879;T:7909082;N:4176	300	300	7584672	8230512	7863879	7909082	4176	SRX9624994	SRS7826190	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	3e-05	0.0	2e-05	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62377	62377	SRR13190605	SRX9624993	SRS7826189	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 30 2c	mi 30 2c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 30 2c	mi 30 2c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-30-2c_S196_L001_R1_001.fastq.gz mi-30-2c_S196_L001_R2_001.fastq.gz	fastq fastq	37328165.0	62088.0	mi 30 2c S196 L001 R1 001.fastq.gz	0:300.65 1:300.57	A:8548501;C:10187951;G:9697186;T:8890317;N:4210	300	300	8548501	10187951	9697186	8890317	4210	SRX9624993	SRS7826189	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.0	0.0	0.0	0.0	1.0	1.0			299	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62378	62378	SRR13190606	SRX9624992	SRS7826188	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 30 1c	mi 30 1c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 30 1c	mi 30 1c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-30-1c_S195_L001_R1_001.fastq.gz mi-30-1c_S195_L001_R2_001.fastq.gz	fastq fastq	35132878.0	58439.0	mi 30 1c S195 L001 R1 001.fastq.gz	0:300.64 1:300.55	A:8244712;C:9349884;G:8860692;T:8673176;N:4414	300	300	8244712	9349884	8860692	8673176	4414	SRX9624992	SRS7826188	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	2e-05	3e-05	0.0	0.0	0.99997	0.99997	0.0	0.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62379	62379	SRR13190607	SRX9624991	SRS7826187	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 3 7c	mi 3 7c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 3 7c	mi 3 7c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-3-7c_S194_L001_R1_001.fastq.gz mi-3-7c_S194_L001_R2_001.fastq.gz	fastq fastq	30264978.0	50329.0	mi 3 7c S194 L001 R1 001.fastq.gz	0:300.77 1:300.57	A:6900494;C:8230090;G:7774259;T:7356149;N:3986	300	300	6900494	8230090	7774259	7356149	3986	SRX9624991	SRS7826187	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	9e-05	6e-05	4e-05	2e-05	0.99995	0.99997	1.0	1.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62380	62380	SRR13190608	SRX9624990	SRS7826186	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 3 6c	mi 3 6c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 3 6c	mi 3 6c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-3-6c_S193_L001_R1_001.fastq.gz mi-3-6c_S193_L001_R2_001.fastq.gz	fastq fastq	33064378.0	54986.0	mi 3 6c S193 L001 R1 001.fastq.gz	0:300.77 1:300.55	A:7472060;C:9066441;G:8507493;T:8012642;N:5742	300	300	7472060	9066441	8507493	8012642	5742	SRX9624990	SRS7826186	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	7e-05	6e-05	6e-05	5e-05	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62381	62381	SRR13190609	SRX9624989	SRS7826185	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 3 5c	mi 3 5c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 3 5c	mi 3 5c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-3-5c_S192_L001_R1_001.fastq.gz mi-3-5c_S192_L001_R2_001.fastq.gz	fastq fastq	34266536.0	56991.0	mi 3 5c S192 L001 R1 001.fastq.gz	0:300.73 1:300.53	A:7853724;C:9289963;G:8746546;T:8371945;N:4358	300	300	7853724	9289963	8746546	8371945	4358	SRX9624989	SRS7826185	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.00052	0.00056	0.00032	0.00036	0.99985	0.99989	0.5	0.625	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62382	62382	SRR13190610	SRX9624988	SRS7826184	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 3 4c	mi 3 4c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 3 4c	mi 3 4c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-3-4c_S191_L001_R1_001.fastq.gz mi-3-4c_S191_L001_R2_001.fastq.gz	fastq fastq	32187848.0	53524.0	mi 3 4c S191 L001 R1 001.fastq.gz	0:300.82 1:300.56	A:7135409;C:8964358;G:8475833;T:7608696;N:3552	300	300	7135409	8964358	8475833	7608696	3552	SRX9624988	SRS7826184	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	3e-05	0.0	2e-05	0.0	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62383	62383	SRR13190611	SRX9624987	SRS7826182	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 3 3c	mi 3 3c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:female\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 3 3c	mi 3 3c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-3-3c_S190_L001_R1_001.fastq.gz mi-3-3c_S190_L001_R2_001.fastq.gz	fastq fastq	32950875.0	54805.0	mi 3 3c S190 L001 R1 001.fastq.gz	0:300.70 1:300.54	A:7590837;C:8884280;G:8377774;T:8093207;N:4777	300	300	7590837	8884280	8377774	8093207	4777	SRX9624987	SRS7826182	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	0.00026	0.00029	0.00017	0.00019	0.99991	0.99991	0.5	0.5	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62384	62384	SRR13190612	SRX9624986	SRS7826183	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi co 4c	mi co 4c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi co 4c	mi co 4c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-co-4c_S163_L001_R1_001.fastq.gz mi-co-4c_S163_L001_R2_001.fastq.gz	fastq fastq	32287934.0	53708.0	mi co 4c S163 L001 R1 001.fastq.gz	0:300.67 1:300.50	A:7411883;C:8733379;G:8310653;T:7827740;N:4279	300	300	7411883	8733379	8310653	7827740	4279	SRX9624986	SRS7826183	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	3e-05	3e-05	2e-05	2e-05	1.0	1.0			301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62385	62385	SRR13190613	SRX9624985	SRS7826181	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 3 2c	mi 3 2c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 3 2c	mi 3 2c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-3-2c_S189_L001_R1_001.fastq.gz mi-3-2c_S189_L001_R2_001.fastq.gz	fastq fastq	36594309.0	60892.0	mi 3 2c S189 L001 R1 001.fastq.gz	0:300.45 1:300.52	A:8716948;C:9589730;G:9099272;T:9181853;N:6506	300	300	8716948	9589730	9099272	9181853	6506	SRX9624985	SRS7826181	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	9e-05	5e-05	5e-05	4e-05	0.99995	1.0	0.5		300	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System
62386	62386	SRR13190614	SRX9624984	SRS7826180	SRP295652	PRJNA682251	microbiota in gastrointestinal tract of zebrafish	PRJNA682251	Other	Effects of TCS on microbiota of gastrointestinal tract in zebrafish		mi 3 1c	mi 3 1c	strain:wild type strain AB\|isolate:gastrointestinal tract\|breed:not applicable\|cultivar:not applicable\|ecotype:not applicable\|age:120 dpf\|dev stage:120 dpf\|sex:male\|tissue:gastrointestinal tract\|BioSampleModel:Model organism or animal	16SrRNA Seq of zebrafish	mi 3 1c	mi 3 1c	DNA bacorde	AMPLICON	TRANSCRIPTOMIC	PCR	PAIRED	ILLUMINA	Illumina MiSeq	SRP295652	mi-3-1c_S188_L001_R1_001.fastq.gz mi-3-1c_S188_L001_R2_001.fastq.gz	fastq fastq	34719927.0	57770.0	mi 3 1c S188 L001 R1 001.fastq.gz	0:300.45 1:300.55	A:7883632;C:9516826;G:8996238;T:8319017;N:4214	300	300	7883632	9516826	8996238	8319017	4214	SRX9624984	SRS7826180	SRA1166526	Xinhua Hospital, Shanghai Jiao Tong university school of medicine\|Ministry of Education and Shanghai Key Laboratory	Xinhua Hospital, Shanghai Jiao Tong university school of medicine	2	6e-05	8e-05	3e-05	4e-05	0.99997	0.99997	1.0	1.0	301	301	T	T	mates < 9% mapping rate	illumina	miseq	unknown	random_priming	unknown	bulk	unknown	unknown	China	2020-12-03	Adult	Adult	Gut	Digestive System

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CREATE TABLE run_metadata("run.accession" VARCHAR, "experiment.accession" VARCHAR, "sample.accession" VARCHAR, "study.accession" VARCHAR, bioproject VARCHAR, "study.title" VARCHAR, "study.alias" VARCHAR, "study.type" VARCHAR, "study.abstract" VARCHAR, "study.attributes" VARCHAR, "study.PMIDs" VARCHAR, "sample.description" VARCHAR, "sample.title" VARCHAR, "sample.alias" VARCHAR, "sample.centername" VARCHAR, "sample.attributes" VARCHAR, "GEOsample.title" VARCHAR, "GEOsample.dataprocessing" VARCHAR, "GEOsample.source" VARCHAR, "GEOsample.treatmentprotocol" VARCHAR, "GEOsample.extractprotocol" VARCHAR, "GEOsample.growthprotocol" VARCHAR, "GEOsample.characteristics" VARCHAR, "GEOsample.accession" VARCHAR, "experiment.title" VARCHAR, "experiment.alias" VARCHAR, "experiment.library_name" VARCHAR, "experiment.design_description" VARCHAR, "experiment.library_construction_protocol" VARCHAR, "experiment.attributes" VARCHAR, "experiment.library_strategy" VARCHAR, "experiment.library_source" VARCHAR, "experiment.library_selection" VARCHAR, "experiment.library_layout" VARCHAR, "experiment.platform" VARCHAR, "experiment.instrument_model" VARCHAR, "experiment.spot_descriptor" VARCHAR, "experiment.study_ref" VARCHAR, "run.title" VARCHAR, "run.attributes" VARCHAR, "run.filename" VARCHAR, "run.semantic_name" VARCHAR, "run.total_bases" DOUBLE, "run.total_spots" DOUBLE, "run.alias" VARCHAR, "run.read_lengths" VARCHAR, "run.base_counts" VARCHAR, "run.r1_length" BIGINT, "run.r2_length" BIGINT, "run.r3_length" BIGINT, "run.r4_length" BIGINT, "run.Acount" BIGINT, "run.Ccount" BIGINT, "run.Gcount" BIGINT, "run.Tcount" BIGINT, "run.Ncount" BIGINT, "run.experiment" VARCHAR, "run.pool_member" VARCHAR, "submission.accession" VARCHAR, "submission.srasource" VARCHAR, "submission.bioprojectsource" VARCHAR, "seqdetective.n_mates" BIGINT, "seqdetective.mapping_rate.mate1" DOUBLE, "seqdetective.mapping_rate.mate2" DOUBLE, "seqdetective.nofeature_rate.mate1" DOUBLE, "seqdetective.nofeature_rate.mate2" DOUBLE, "seqdetective.sparsity.mate1" DOUBLE, "seqdetective.sparsity.mate2" DOUBLE, "seqdetective.pos_strand_rate.mate1" DOUBLE, "seqdetective.pos_strand_rate.mate2" DOUBLE, "seqdetective.readlen.mate1" BIGINT, "seqdetective.readlen.mate2" BIGINT, "seqdetective.judgement.mate1" VARCHAR, "seqdetective.judgement.mate2" VARCHAR, "seqdetective.judgement.reason" VARCHAR, platform_family VARCHAR, instrument_generation VARCHAR, read_bias VARCHAR, selection_class VARCHAR, prep_kit VARCHAR, sc_or_bulk VARCHAR, tech_class VARCHAR, technology VARCHAR, tech_variant VARCHAR, "submission.bioprojectsource.country" VARCHAR, earliest_date DATE, devstage_curation VARCHAR, devstage_curation_coarse VARCHAR, tissue_curation VARCHAR, tissue_curation_coarse VARCHAR);;
CREATE INDEX idx_run_bioproject ON run_metadata(bioproject);;
CREATE INDEX idx_run_run_accession ON run_metadata("run.accession");;