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71 rows where devstage_curation = "Pharyngula" and tissue_curation_coarse = "Cell Line"

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experiment.library_selection 2

experiment.library_layout 2

tissue_curation_coarse 1

  • Cell Line · 71 ✖

tissue_curation 1

technology 1

experiment.platform 1

experiment.library_strategy 1

experiment.library_source 1

devstage_curation_coarse 1

devstage_curation 1

  • Pharyngula · 71 ✖
Link rowid ▼ run.accession experiment.accession sample.accession study.accession bioproject study.title study.alias study.type study.abstract study.attributes study.PMIDs sample.description sample.title sample.alias sample.centername sample.attributes GEOsample.title GEOsample.dataprocessing GEOsample.source GEOsample.treatmentprotocol GEOsample.extractprotocol GEOsample.growthprotocol GEOsample.characteristics GEOsample.accession experiment.title experiment.alias experiment.library_name experiment.design_description experiment.library_construction_protocol experiment.attributes experiment.library_strategy experiment.library_source experiment.library_selection experiment.library_layout experiment.platform experiment.instrument_model experiment.spot_descriptor experiment.study_ref run.title run.attributes run.filename run.semantic_name run.total_bases run.total_spots run.alias run.read_lengths run.base_counts run.r1_length run.r2_length run.r3_length run.r4_length run.Acount run.Ccount run.Gcount run.Tcount run.Ncount run.experiment run.pool_member submission.accession submission.srasource submission.bioprojectsource seqdetective.n_mates seqdetective.mapping_rate.mate1 seqdetective.mapping_rate.mate2 seqdetective.nofeature_rate.mate1 seqdetective.nofeature_rate.mate2 seqdetective.sparsity.mate1 seqdetective.sparsity.mate2 seqdetective.pos_strand_rate.mate1 seqdetective.pos_strand_rate.mate2 seqdetective.readlen.mate1 seqdetective.readlen.mate2 seqdetective.judgement.mate1 seqdetective.judgement.mate2 seqdetective.judgement.reason platform_family instrument_generation read_bias selection_class prep_kit sc_or_bulk tech_class technology tech_variant submission.bioprojectsource.country earliest_date devstage_curation devstage_curation_coarse tissue_curation tissue_curation_coarse
10454 10454 ERR9267558 ERX8809981 ERS10996110 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393619 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393619|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_24h_run3.fastq.gz fastq 77386650.0 1547733.0 S TOXR1835:S 2 Ebut EC20 24h run3 r 0:50 A:15900745;C:20491362;G:18821839;T:22172078;N:626 50       15900745 20491362 18821839 22172078 626 ERX8809981 ERS10996110 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10463 10463 ERR9267552 ERX8809975 ERS10996104 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393613 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393613|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_24h_run3.fastq.gz fastq 56607950.0 1132159.0 S TOXR1835:S VPA EC20 24h run3 r 0:50 A:11573141;C:14902207;G:13664100;T:16468080;N:422 50       11573141 14902207 13664100 16468080 422 ERX8809975 ERS10996104 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10464 10464 ERR9267596 ERX8810019 ERS10996148 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393657 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393657|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 24h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 24h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_24h_run5.fastq.gz fastq 74744000.0 1494880.0 S TOXR1835:S VPA EC20 24h run5 r 0:50 A:15271154;C:19689007;G:18318968;T:21464272;N:599 50       15271154 19689007 18318968 21464272 599 ERX8810019 ERS10996148 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10469 10469 ERR9267544 ERX8809967 ERS10996096 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393605 University of Heidelberg Compound:2 Mhex|Concentration:110.5 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393605|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex 1 2EC10 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex 1 2EC10 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex 1 2EC10 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_1-2EC10_24h_run2.fastq.gz fastq 64605400.0 1292108.0 S TOXR1835:S 2 Mhex 1 2EC10 24h run2 r 0:50 A:13413850;C:17172814;G:15822945;T:18195301;N:490 50       13413850 17172814 15822945 18195301 490 ERX8809967 ERS10996096 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10471 10471 ERR9267531 ERX8809954 ERS10996083 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393592 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393592|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_24h_run2.fastq.gz fastq 54622800.0 1092456.0 S TOXR1835:S VPA EC10 24h run2 r 0:50 A:11200509;C:14326079;G:13168753;T:15927009;N:450 50       11200509 14326079 13168753 15927009 450 ERX8809954 ERS10996083 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10472 10472 ERR9267510 ERX8809933 ERS10996062 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393571 University of Heidelberg Compound:VPA|Concentration:21.5 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393571|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA 1 2EC10 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA 1 2EC10 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_24h_run1.fastq.gz fastq 47564150.0 951283.0 S TOXR1835:S VPA 1 2EC10 24h run1 r 0:50 A:9901250;C:12587465;G:11892253;T:13182819;N:363 50       9901250 12587465 11892253 13182819 363 ERX8809933 ERS10996062 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10473 10473 ERR9267580 ERX8810003 ERS10996132 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393641 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393641|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_24h_run4.fastq.gz fastq 70860850.0 1417217.0 S TOXR1835:S 2 Ebut EC20 24h run4 r 0:50 A:14654955;C:18637290;G:17382725;T:20185304;N:576 50       14654955 18637290 17382725 20185304 576 ERX8810003 ERS10996132 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10478 10478 ERR9267574 ERX8809997 ERS10996126 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393635 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393635|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_24h_run4.fastq.gz fastq 72740300.0 1454806.0 S TOXR1835:S VPA EC20 24h run4 r 0:50 A:14859387;C:19088133;G:17571423;T:21220741;N:616 50       14859387 19088133 17571423 21220741 616 ERX8809997 ERS10996126 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10483 10483 ERR9267608 ERX8810031 ERS10996160 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393669 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393669|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 24h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 24h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_24h_run5.fastq.gz fastq 69796100.0 1395922.0 S TOXR1835:S 2 Mhex EC20 24h run5 r 0:50 A:14281016;C:18439376;G:16990861;T:20084293;N:554 50       14281016 18439376 16990861 20084293 554 ERX8810031 ERS10996160 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10490 10490 ERR9267532 ERX8809955 ERS10996084 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393593 University of Heidelberg Compound:VPA|Concentration:21.5 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393593|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA 1 2EC10 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA 1 2EC10 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_24h_run2.fastq.gz fastq 39722850.0 794457.0 S TOXR1835:S VPA 1 2EC10 24h run2 r 0:50 A:8097198;C:10472115;G:9592079;T:11561151;N:307 50       8097198 10472115 9592079 11561151 307 ERX8809955 ERS10996084 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10491 10491 ERR9267538 ERX8809961 ERS10996090 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393599 University of Heidelberg Compound:2 Ebut|Concentration:139.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393599|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut 1 2EC10 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut 1 2EC10 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_24h_run2.fastq.gz fastq 73250500.0 1465010.0 S TOXR1835:S 2 Ebut 1 2EC10 24h run2 r 0:50 A:15222334;C:19351278;G:17951984;T:20724302;N:602 50       15222334 19351278 17951984 20724302 602 ERX8809961 ERS10996090 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10492 10492 ERR9267542 ERX8809965 ERS10996094 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393603 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393603|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_24h_run2.fastq.gz fastq 65249250.0 1304985.0 S TOXR1835:S 2 Mhex EC20 24h run2 r 0:50 A:13711582;C:17369320;G:16163352;T:18004475;N:521 50       13711582 17369320 16163352 18004475 521 ERX8809965 ERS10996094 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10499 10499 ERR9267506 ERX8809929 ERS10996058 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393567 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393567|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S DMSO 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S DMSO 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_24h_run1.fastq.gz fastq 75220500.0 1504410.0 S TOXR1835:S DMSO 24h run1 r 0:50 A:15456591;C:20474658;G:18952417;T:20336227;N:607 50       15456591 20474658 18952417 20336227 607 ERX8809929 ERS10996058 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10503 10503 ERR9267610 ERX8810033 ERS10996162 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393671 University of Heidelberg Compound:2 Mhex|Concentration:110.5 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393671|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex 1 2EC10 24h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex 1 2EC10 24h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex 1 2EC10 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_1-2EC10_24h_run5.fastq.gz fastq 80281550.0 1605631.0 S TOXR1835:S 2 Mhex 1 2EC10 24h run5 r 0:50 A:16421663;C:21326310;G:19725644;T:22807321;N:612 50       16421663 21326310 19725644 22807321 612 ERX8810033 ERS10996162 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10504 10504 ERR9267515 ERX8809938 ERS10996067 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393576 University of Heidelberg Compound:2 Ebut|Concentration:278.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393576|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC10 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC10 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_24h_run1.fastq.gz fastq 72324950.0 1446499.0 S TOXR1835:S 2 Ebut EC10 24h run1 r 0:50 A:14697164;C:19178040;G:17733798;T:20715349;N:599 50       14697164 19178040 17733798 20715349 599 ERX8809938 ERS10996067 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10505 10505 ERR9267543 ERX8809966 ERS10996095 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393604 University of Heidelberg Compound:2 Mhex|Concentration:221.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393604|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_24h_run2.fastq.gz fastq 67215400.0 1344308.0 S TOXR1835:S 2 Mhex EC10 24h run2 r 0:50 A:14021321;C:17770179;G:16477677;T:18945728;N:495 50       14021321 17770179 16477677 18945728 495 ERX8809966 ERS10996095 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10507 10507 ERR9267586 ERX8810009 ERS10996138 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393647 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393647|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_24h_run4.fastq.gz fastq 79071250.0 1581425.0 S TOXR1835:S 2 Mhex EC20 24h run4 r 0:50 A:16211641;C:20891506;G:19409569;T:22557862;N:672 50       16211641 20891506 19409569 22557862 672 ERX8810009 ERS10996138 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10508 10508 ERR9267522 ERX8809945 ERS10996074 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393583 University of Heidelberg Compound:2 Mhex|Concentration:110.5 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393583|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex 1 2EC10 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex 1 2EC10 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex 1 2EC10 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_1-2EC10_24h_run1.fastq.gz fastq 67836050.0 1356721.0 S TOXR1835:S 2 Mhex 1 2EC10 24h run1 r 0:50 A:13891435;C:18116855;G:16597990;T:19229224;N:546 50       13891435 18116855 16597990 19229224 546 ERX8809945 ERS10996074 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10511 10511 ERR9267509 ERX8809932 ERS10996061 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393570 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393570|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_24h_run1.fastq.gz fastq 59116500.0 1182330.0 S TOXR1835:S VPA EC10 24h run1 r 0:50 A:12037391;C:15821153;G:14680141;T:16577330;N:485 50       12037391 15821153 14680141 16577330 485 ERX8809932 ERS10996061 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10512 10512 ERR9267598 ERX8810021 ERS10996150 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393659 University of Heidelberg Compound:VPA|Concentration:21.5 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393659|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA 1 2EC10 24h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA 1 2EC10 24h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_24h_run5.fastq.gz fastq 77539400.0 1550788.0 S TOXR1835:S VPA 1 2EC10 24h run5 r 0:50 A:15842699;C:20382842;G:18634109;T:22679133;N:617 50       15842699 20382842 18634109 22679133 617 ERX8810021 ERS10996150 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10515 10515 ERR9267565 ERX8809988 ERS10996117 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393626 University of Heidelberg Compound:2 Mhex|Concentration:221.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393626|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_24h_run3.fastq.gz fastq 63053150.0 1261063.0 S TOXR1835:S 2 Mhex EC10 24h run3 r 0:50 A:13188112;C:16366837;G:15221999;T:18275662;N:540 50       13188112 16366837 15221999 18275662 540 ERX8809988 ERS10996117 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10516 10516 ERR9267582 ERX8810005 ERS10996134 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393643 University of Heidelberg Compound:2 Ebut|Concentration:139.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393643|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut 1 2EC10 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut 1 2EC10 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_24h_run4.fastq.gz fastq 72429250.0 1448585.0 S TOXR1835:S 2 Ebut 1 2EC10 24h run4 r 0:50 A:14967715;C:19065966;G:17868293;T:20526650;N:626 50       14967715 19065966 17868293 20526650 626 ERX8810005 ERS10996134 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10518 10518 ERR9267597 ERX8810020 ERS10996149 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393658 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393658|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 24h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 24h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_24h_run5.fastq.gz fastq 71525900.0 1430518.0 S TOXR1835:S VPA EC10 24h run5 r 0:50 A:14677327;C:18873904;G:17392831;T:20581262;N:576 50       14677327 18873904 17392831 20581262 576 ERX8810020 ERS10996149 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10520 10520 ERR9267560 ERX8809983 ERS10996112 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393621 University of Heidelberg Compound:2 Ebut|Concentration:139.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393621|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut 1 2EC10 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut 1 2EC10 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_24h_run3.fastq.gz fastq 61192750.0 1223855.0 S TOXR1835:S 2 Ebut 1 2EC10 24h run3 r 0:50 A:12498110;C:16073476;G:14884074;T:17736605;N:485 50       12498110 16073476 14884074 17736605 485 ERX8809983 ERS10996112 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10524 10524 ERR9267602 ERX8810025 ERS10996154 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393663 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393663|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 24h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 24h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_24h_run5.fastq.gz fastq 61380050.0 1227601.0 S TOXR1835:S 2 Ebut EC20 24h run5 r 0:50 A:12688864;C:16106948;G:14989705;T:17594041;N:492 50       12688864 16106948 14989705 17594041 492 ERX8810025 ERS10996154 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10530 10530 ERR9267536 ERX8809959 ERS10996088 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393597 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393597|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_24h_run2.fastq.gz fastq 68170400.0 1363408.0 S TOXR1835:S 2 Ebut EC20 24h run2 r 0:50 A:13907721;C:18061434;G:16501968;T:19698739;N:538 50       13907721 18061434 16501968 19698739 538 ERX8809959 ERS10996088 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10533 10533 ERR9267528 ERX8809951 ERS10996080 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393589 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393589|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S DMSO 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S DMSO 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_24h_run2.fastq.gz fastq 71563850.0 1431277.0 S TOXR1835:S DMSO 24h run2 r 0:50 A:14628305;C:19001539;G:17357226;T:20576231;N:549 50       14628305 19001539 17357226 20576231 549 ERX8809951 ERS10996080 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10535 10535 ERR9267537 ERX8809960 ERS10996089 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393598 University of Heidelberg Compound:2 Ebut|Concentration:278.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393598|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC10 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC10 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_24h_run2.fastq.gz fastq 68120050.0 1362401.0 S TOXR1835:S 2 Ebut EC10 24h run2 r 0:50 A:13965221;C:17986207;G:16432958;T:19735096;N:568 50       13965221 17986207 16432958 19735096 568 ERX8809960 ERS10996089 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10536 10536 ERR9267581 ERX8810004 ERS10996133 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393642 University of Heidelberg Compound:2 Ebut|Concentration:278.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393642|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC10 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC10 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_24h_run4.fastq.gz fastq 71613650.0 1432273.0 S TOXR1835:S 2 Ebut EC10 24h run4 r 0:50 A:14701741;C:18830050;G:17460399;T:20620882;N:578 50       14701741 18830050 17460399 20620882 578 ERX8810004 ERS10996133 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10540 10540 ERR9267553 ERX8809976 ERS10996105 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393614 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393614|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_24h_run3.fastq.gz fastq 63203400.0 1264068.0 S TOXR1835:S VPA EC10 24h run3 r 0:50 A:12952959;C:16648229;G:15464704;T:18137006;N:502 50       12952959 16648229 15464704 18137006 502 ERX8809976 ERS10996105 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10543 10543 ERR9267603 ERX8810026 ERS10996155 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393664 University of Heidelberg Compound:2 Ebut|Concentration:278.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393664|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC10 24h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC10 24h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_24h_run5.fastq.gz fastq 69144200.0 1382884.0 S TOXR1835:S 2 Ebut EC10 24h run5 r 0:50 A:14342643;C:18137360;G:16893603;T:19770019;N:575 50       14342643 18137360 16893603 19770019 575 ERX8810026 ERS10996155 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10544 10544 ERR9267516 ERX8809939 ERS10996068 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393577 University of Heidelberg Compound:2 Ebut|Concentration:139.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393577|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut 1 2EC10 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut 1 2EC10 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_24h_run1.fastq.gz fastq 61095100.0 1221902.0 S TOXR1835:S 2 Ebut 1 2EC10 24h run1 r 0:50 A:12598869;C:16199763;G:14812809;T:17483119;N:540 50       12598869 16199763 14812809 17483119 540 ERX8809939 ERS10996068 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10545 10545 ERR9267575 ERX8809998 ERS10996127 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393636 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393636|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_24h_run4.fastq.gz fastq 80315850.0 1606317.0 S TOXR1835:S VPA EC10 24h run4 r 0:50 A:16334881;C:21260448;G:19619485;T:23100382;N:654 50       16334881 21260448 19619485 23100382 654 ERX8809998 ERS10996127 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10547 10547 ERR9267521 ERX8809944 ERS10996073 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393582 University of Heidelberg Compound:2 Mhex|Concentration:221.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393582|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_24h_run1.fastq.gz fastq 70789400.0 1415788.0 S TOXR1835:S 2 Mhex EC10 24h run1 r 0:50 A:14498203;C:18896328;G:17366489;T:20027834;N:546 50       14498203 18896328 17366489 20027834 546 ERX8809944 ERS10996073 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10549 10549 ERR9267576 ERX8809999 ERS10996128 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393637 University of Heidelberg Compound:VPA|Concentration:21.5 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393637|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA 1 2EC10 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA 1 2EC10 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_24h_run4.fastq.gz fastq 76651150.0 1533023.0 S TOXR1835:S VPA 1 2EC10 24h run4 r 0:50 A:15675078;C:20183650;G:18632192;T:22159617;N:613 50       15675078 20183650 18632192 22159617 613 ERX8809999 ERS10996128 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10550 10550 ERR9267564 ERX8809987 ERS10996116 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393625 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393625|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_24h_run3.fastq.gz fastq 71554550.0 1431091.0 S TOXR1835:S 2 Mhex EC20 24h run3 r 0:50 A:14691978;C:18921635;G:17433619;T:20506704;N:614 50       14691978 18921635 17433619 20506704 614 ERX8809987 ERS10996116 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10552 10552 ERR9267508 ERX8809931 ERS10996060 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393569 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393569|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_24h_run1.fastq.gz fastq 58109550.0 1162191.0 S TOXR1835:S VPA EC20 24h run1 r 0:50 A:11912533;C:15535929;G:14498424;T:16162192;N:472 50       11912533 15535929 14498424 16162192 472 ERX8809931 ERS10996060 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10555 10555 ERR9267514 ERX8809937 ERS10996066 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393575 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393575|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_24h_run1.fastq.gz fastq 74971250.0 1499425.0 S TOXR1835:S 2 Ebut EC20 24h run1 r 0:50 A:15584309;C:19886247;G:18463203;T:21036851;N:640 50       15584309 19886247 18463203 21036851 640 ERX8809937 ERS10996066 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10556 10556 ERR9267520 ERX8809943 ERS10996072 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393581 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393581|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_24h_run1.fastq.gz fastq 70012800.0 1400256.0 S TOXR1835:S 2 Mhex EC20 24h run1 r 0:50 A:14373300;C:18657161;G:17190667;T:19790999;N:673 50       14373300 18657161 17190667 19790999 673 ERX8809943 ERS10996072 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10559 10559 ERR9267588 ERX8810011 ERS10996140 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393649 University of Heidelberg Compound:2 Mhex|Concentration:110.5 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393649|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex 1 2EC10 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex 1 2EC10 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex 1 2EC10 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_1-2EC10_24h_run4.fastq.gz fastq 75761200.0 1515224.0 S TOXR1835:S 2 Mhex 1 2EC10 24h run4 r 0:50 A:15474561;C:20162131;G:18671084;T:21452813;N:611 50       15474561 20162131 18671084 21452813 611 ERX8810011 ERS10996140 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10563 10563 ERR9267550 ERX8809973 ERS10996102 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393611 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393611|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S DMSO 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S DMSO 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_24h_run3.fastq.gz fastq 69322100.0 1386442.0 S TOXR1835:S DMSO 24h run3 r 0:50 A:14073222;C:18386696;G:16912301;T:19949313;N:568 50       14073222 18386696 16912301 19949313 568 ERX8809973 ERS10996102 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10567 10567 ERR9267609 ERX8810032 ERS10996161 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393670 University of Heidelberg Compound:2 Mhex|Concentration:221.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393670|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 24h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 24h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_24h_run5.fastq.gz fastq 72040150.0 1440803.0 S TOXR1835:S 2 Mhex EC10 24h run5 r 0:50 A:14750518;C:19029981;G:17564059;T:20695002;N:590 50       14750518 19029981 17564059 20695002 590 ERX8810032 ERS10996161 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10570 10570 ERR9267559 ERX8809982 ERS10996111 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393620 University of Heidelberg Compound:2 Ebut|Concentration:278.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393620|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC10 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC10 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_24h_run3.fastq.gz fastq 73941300.0 1478826.0 S TOXR1835:S 2 Ebut EC10 24h run3 r 0:50 A:15366120;C:19364001;G:18011340;T:21199239;N:600 50       15366120 19364001 18011340 21199239 600 ERX8809982 ERS10996111 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10575 10575 ERR9267530 ERX8809953 ERS10996082 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393591 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393591|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_24h_run2.fastq.gz fastq 55846150.0 1116923.0 S TOXR1835:S VPA EC20 24h run2 r 0:50 A:11487115;C:14682007;G:13493343;T:16183215;N:470 50       11487115 14682007 13493343 16183215 470 ERX8809953 ERS10996082 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10577 10577 ERR9267504 ERX8809927 ERS10996056 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393565 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393565|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 24h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 24h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 24h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_24h_run1.fastq.gz fastq 72467700.0 1449354.0 S TOXR1835:S NK 24h run1 r 0:50 A:14870474;C:19586715;G:18148273;T:19861616;N:622 50       14870474 19586715 18148273 19861616 622 ERX8809927 ERS10996056 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10584 10584 ERR9267548 ERX8809971 ERS10996100 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393609 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393609|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_24h_run3.fastq.gz fastq 71899550.0 1437991.0 S TOXR1835:S NK 24h run3 r 0:50 A:14635153;C:19099594;G:17485499;T:20678684;N:620 50       14635153 19099594 17485499 20678684 620 ERX8809971 ERS10996100 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10594 10594 ERR9267566 ERX8809989 ERS10996118 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393627 University of Heidelberg Compound:2 Mhex|Concentration:110.5 µM|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393627|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex 1 2EC10 24h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex 1 2EC10 24h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex 1 2EC10 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_1-2EC10_24h_run3.fastq.gz fastq 70350050.0 1407001.0 S TOXR1835:S 2 Mhex 1 2EC10 24h run3 r 0:50 A:14279692;C:18591291;G:17172710;T:20305828;N:529 50       14279692 18591291 17172710 20305828 529 ERX8809989 ERS10996118 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10597 10597 ERR9267526 ERX8809949 ERS10996078 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393587 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393587|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 24h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 24h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 24h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_24h_run2.fastq.gz fastq 75912300.0 1518246.0 S TOXR1835:S NK 24h run2 r 0:50 A:15600935;C:20232557;G:18734139;T:21344046;N:623 50       15600935 20232557 18734139 21344046 623 ERX8809949 ERS10996078 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10598 10598 ERR9267570 ERX8809993 ERS10996122 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393631 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393631|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_24h_run4.fastq.gz fastq 71027750.0 1420555.0 S TOXR1835:S NK 24h run4 r 0:50 A:14611810;C:18688407;G:17316162;T:20410790;N:581 50       14611810 18688407 17316162 20410790 581 ERX8809993 ERS10996122 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10601 10601 ERR9267604 ERX8810027 ERS10996156 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1835:S 2 Ebut 1 2EC10 24h run5   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:2 Ebut|scientific name:Danio rerio|Concentration:139.0 µM|Exposure time:24 hpf name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_24h_run5.fastq.gz fastq 72204950.0 1444099.0 S TOXR1835:S 2 Ebut 1 2EC10 24h run5 r 0:50 A:14929489;C:18973892;G:17613744;T:20687217;N:608 50       14929489 18973892 17613744 20687217 608 ERX8810027 ERS10996156 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10612 10612 ERR9267594 ERX8810017 ERS10996146 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1835:S DMSO 24h run5   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:DMSO|scientific name:Danio rerio|Concentration:0.1 %|Exposure time:24 hpf name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_24h_run5.fastq.gz fastq 723600.0 14472.0 S TOXR1835:S DMSO 24h run5 r 0:50 A:201971;C:183025;G:152695;T:185902;N:7 50       201971 183025 152695 185902 7 ERX8810017 ERS10996146 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10614 10614 ERR9267554 ERX8809977 ERS10996106 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1835:S VPA 1 2EC10 24h run3   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:VPA|scientific name:Danio rerio|Concentration:21.5 µM|Exposure time:24 hpf name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 24h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_24h_run3.fastq.gz fastq 70791200.0 1415824.0 S TOXR1835:S VPA 1 2EC10 24h run3 r 0:50 A:14404772;C:18876486;G:17539965;T:19969386;N:591 50       14404772 18876486 17539965 19969386 591 ERX8809977 ERS10996106 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10615 10615 ERR9267587 ERX8810010 ERS10996139 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1835:S 2 Mhex EC10 24h run4   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:2 Mhex|scientific name:Danio rerio|Concentration:221.0 µM|Exposure time:24 hpf name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_24h_run4.fastq.gz fastq 80041600.0 1600832.0 S TOXR1835:S 2 Mhex EC10 24h run4 r 0:50 A:16407828;C:21211478;G:19553748;T:22867924;N:622 50       16407828 21211478 19553748 22867924 622 ERX8810010 ERS10996139 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10617 10617 ERR9267592 ERX8810015 ERS10996144 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393653 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393653|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 24h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 24h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 24h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_24h_run5.fastq.gz fastq 71628950.0 1432579.0 S TOXR1835:S NK 24h run5 r 0:50 A:14738445;C:18905171;G:17412936;T:20571806;N:592 50       14738445 18905171 17412936 20571806 592 ERX8810015 ERS10996144 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10623 10623 ERR9267572 ERX8809995 ERS10996124 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393633 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:24 hpf Id:SAMEA13393633|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S DMSO 24h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S DMSO 24h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 24h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_24h_run4.fastq.gz fastq 76571400.0 1531428.0 S TOXR1835:S DMSO 24h run4 r 0:50 A:15729570;C:20288415;G:18672527;T:21880297;N:591 50       15729570 20288415 18672527 21880297 591 ERX8809995 ERS10996124 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10624 10624 ERR9269919 ERX8812316 ERS10998382 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395728 University of Heidelberg Compound:VPA|Concentration:2.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf|External Id:SAMEA13395728|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 24hpf VPA2 UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 24hpf VPA2 UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 24hpf VPA2 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_24hpf_VPA2_UHEI.fastq.gz fastq 59344750.0 1186895.0 S TOXR1832:S 24hpf VPA2 UHEI r 0:50 A:12361540;C:15343560;G:14226695;T:17405034;N:7921 50       12361540 15343560 14226695 17405034 7921 ERX8812316 ERS10998382 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10625 10625 ERR9269913 ERX8812310 ERS10998376 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395722 University of Heidelberg Compound:VPA|Concentration:50.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf|External Id:SAMEA13395722|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 24hpf VPA50 UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 24hpf VPA50 UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 24hpf VPA50 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_24hpf_VPA50_UHEI.fastq.gz fastq 87495250.0 1749905.0 S TOXR1832:S 24hpf VPA50 UHEI r 0:50 A:18298773;C:22233747;G:20342014;T:26609135;N:11581 50       18298773 22233747 20342014 26609135 11581 ERX8812310 ERS10998376 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10628 10628 ERR9269907 ERX8812304 ERS10998369 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395716 University of Heidelberg Compound:VPA|Concentration:200.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf|External Id:SAMEA13395716|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 24hpf VPA200 UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 24hpf VPA200 UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 24hpf VPA200 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_24hpf_VPA200_UHEI.fastq.gz fastq 98702050.0 1974041.0 S TOXR1832:S 24hpf VPA200 UHEI r 0:50 A:20978758;C:25656186;G:24386413;T:27667317;N:13376 50       20978758 25656186 24386413 27667317 13376 ERX8812304 ERS10998369 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10630 10630 ERR9269904 ERX8812301 ERS10998366 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395713 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:24 hpf|External Id:SAMEA13395713|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 24hpf DMSO UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 24hpf DMSO UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 24hpf DMSO UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_24hpf_DMSO_UHEI.fastq.gz fastq 73932600.0 1478652.0 S TOXR1832:S 24hpf DMSO UHEI r 0:50 A:15585622;C:19420814;G:18681864;T:20234365;N:9935 50       15585622 19420814 18681864 20234365 9935 ERX8812301 ERS10998366 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10634 10634 ERR9269901 ERX8812298 ERS10998363 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395710 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:24 hpf|External Id:SAMEA13395710|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:11Z|INSDC status:public|Submitter Id:S TOXR1832:S 24hpf NK UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 24hpf NK UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 24hpf NK UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_24hpf_NK_UHEI.fastq.gz fastq 67979350.0 1359587.0 S TOXR1832:S 24hpf NK UHEI r 0:50 A:14147053;C:17803617;G:16985508;T:19033861;N:9311 50       14147053 17803617 16985508 19033861 9311 ERX8812298 ERS10998363 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10639 10639 ERR9269916 ERX8812313 ERS10998379 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395725 University of Heidelberg Compound:VPA|Concentration:10.0 µM|ENA first public:2024 03 15|Exposure time:24 hpf|External Id:SAMEA13395725|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 24hpf VPA10 UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 24hpf VPA10 UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 24hpf VPA10 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_24hpf_VPA10_UHEI.fastq.gz fastq 81076400.0 1621528.0 S TOXR1832:S 24hpf VPA10 UHEI r 0:50 A:16717338;C:20603555;G:18834227;T:24910578;N:10702 50       16717338 20603555 18834227 24910578 10702 ERX8812313 ERS10998379 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
10647 10647 ERR9269910 ERX8812307 ERS10998373 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1832:S 24hpf VPA100 UHEI   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:VPA|scientific name:Danio rerio|Concentration:100.0 µM|Exposure time:24 hpf|Gender:null|common name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1832:S 24hpf VPA100 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_24hpf_VPA100_UHEI.fastq.gz fastq 91586100.0 1831722.0 S TOXR1832:S 24hpf VPA100 UHEI r 0:50 A:19049656;C:23685082;G:22248578;T:26590272;N:12512 50       19049656 23685082 22248578 26590272 12512 ERX8812307 ERS10998373 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Pharyngula Embryo Cell Line Cell Line
34557 34557 SRR32105502 SRX27451095 SRS23877593 SRP559581 PRJNA1214993 Developmental toxicity of new psychoactive substance esketamine to zebrafish PRJNA1214993 Other New psychoactive substance esketamine has developmental toxicity and endocrine disrupting effects on zebrafish.       SC2 SC2   breed:not applicable|age:24 hpf|collection date:2023 05 23|geo loc name:China: Guangzhou|sex:not applicable|tissue:not applicable|cell line:ZF4 cell|order:10|BioSampleModel:Model organism or animal                 Developmental toxicity of new psychoactive substance esketamine to zebrafish SC2 SC2 cell     RNA-Seq TRANSCRIPTOMIC cDNA PAIRED ILLUMINA Illumina HiSeq 4000   SRP559581     L1EHE2301599--SC2.R1.raw.fastq.gz L1EHE2301599--SC2.R2.raw.fastq.gz fastq fastq 12846566600.0 42538300.0 L1EHE2301599 SC2.R1.raw.fastq.gz 0:151 1:151 A:3482255367;C:2921391563;G:2987736885;T:3455132712;N:50073 151 151     3482255367 2921391563 2987736885 3455132712 50073 SRX27451095 SRS23877593 SRA2059104 South China Normal University|School of Environment South China Normal University                       B B biological fallback assumption illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   China 2025-01-24 Pharyngula Embryo Cell Line Cell Line
34558 34558 SRR32105503 SRX27451094 SRS23877596 SRP559581 PRJNA1214993 Developmental toxicity of new psychoactive substance esketamine to zebrafish PRJNA1214993 Other New psychoactive substance esketamine has developmental toxicity and endocrine disrupting effects on zebrafish.       SC1 SC1   breed:not applicable|age:24 hpf|collection date:2023 05 23|geo loc name:China: Guangzhou|sex:not applicable|tissue:not applicable|cell line:ZF4 cell|order:9|BioSampleModel:Model organism or animal                 Developmental toxicity of new psychoactive substance esketamine to zebrafish SC1 SC1 cell     RNA-Seq TRANSCRIPTOMIC cDNA PAIRED ILLUMINA Illumina HiSeq 4000   SRP559581     L1EHE2301598--SC1.R1.raw.fastq.gz L1EHE2301598--SC1.R2.raw.fastq.gz fastq fastq 11231331982.0 37189841.0 L1EHE2301598 SC1.R1.raw.fastq.gz 0:151 1:151 A:3065685647;C:2524957941;G:2595543794;T:3045100764;N:43836 151 151     3065685647 2524957941 2595543794 3045100764 43836 SRX27451094 SRS23877596 SRA2059104 South China Normal University|School of Environment South China Normal University                       B B biological fallback assumption illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   China 2025-01-24 Pharyngula Embryo Cell Line Cell Line
34573 34573 SRR32105518 SRX27451079 SRS23877577 SRP559581 PRJNA1214993 Developmental toxicity of new psychoactive substance esketamine to zebrafish PRJNA1214993 Other New psychoactive substance esketamine has developmental toxicity and endocrine disrupting effects on zebrafish.       SK4 SK4   breed:not applicable|age:24 hpf|collection date:2023 05 23|geo loc name:China: Guangzhou|sex:not applicable|tissue:not applicable|cell line:ZF4 cell|order:16|BioSampleModel:Model organism or animal                 Developmental toxicity of new psychoactive substance esketamine to zebrafish SK4 SK4 cell     RNA-Seq TRANSCRIPTOMIC cDNA PAIRED ILLUMINA Illumina HiSeq 4000   SRP559581     L1EHE2301609--SK4.R1.raw.fastq.gz L1EHE2301609--SK4.R2.raw.fastq.gz fastq fastq 12103764380.0 40078690.0 L1EHE2301609 SK4.R1.raw.fastq.gz 0:151 1:151 A:3257453744;C:2780396394;G:2833143851;T:3232723098;N:47293 151 151     3257453744 2780396394 2833143851 3232723098 47293 SRX27451079 SRS23877577 SRA2059104 South China Normal University|School of Environment South China Normal University                       B B biological fallback assumption illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   China 2025-01-24 Pharyngula Embryo Cell Line Cell Line
34574 34574 SRR32105519 SRX27451078 SRS23877576 SRP559581 PRJNA1214993 Developmental toxicity of new psychoactive substance esketamine to zebrafish PRJNA1214993 Other New psychoactive substance esketamine has developmental toxicity and endocrine disrupting effects on zebrafish.       SK3 SK3   breed:not applicable|age:24 hpf|collection date:2023 05 23|geo loc name:China: Guangzhou|sex:not applicable|tissue:not applicable|cell line:ZF4 cell|order:15|BioSampleModel:Model organism or animal                 Developmental toxicity of new psychoactive substance esketamine to zebrafish SK3 SK3 cell     RNA-Seq TRANSCRIPTOMIC cDNA PAIRED ILLUMINA Illumina HiSeq 4000   SRP559581     L1EHE2301608--SK3.R1.raw.fastq.gz L1EHE2301608--SK3.R2.raw.fastq.gz fastq fastq 13563244914.0 44911407.0 L1EHE2301608 SK3.R1.raw.fastq.gz 0:151 1:151 A:3628034105;C:3137333406;G:3198471155;T:3599351549;N:54699 151 151     3628034105 3137333406 3198471155 3599351549 54699 SRX27451078 SRS23877576 SRA2059104 South China Normal University|School of Environment South China Normal University                       B B biological fallback assumption illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   China 2025-01-24 Pharyngula Embryo Cell Line Cell Line
34575 34575 SRR32105520 SRX27451077 SRS23877575 SRP559581 PRJNA1214993 Developmental toxicity of new psychoactive substance esketamine to zebrafish PRJNA1214993 Other New psychoactive substance esketamine has developmental toxicity and endocrine disrupting effects on zebrafish.       SK2 SK2   breed:not applicable|age:24 hpf|collection date:2023 05 23|geo loc name:China: Guangzhou|sex:not applicable|tissue:not applicable|cell line:ZF4 cell|order:14|BioSampleModel:Model organism or animal                 Developmental toxicity of new psychoactive substance esketamine to zebrafish SK2 SK2 cell     RNA-Seq TRANSCRIPTOMIC cDNA PAIRED ILLUMINA Illumina HiSeq 4000   SRP559581     L1EHE2301607--SK2.R1.raw.fastq.gz L1EHE2301607--SK2.R2.raw.fastq.gz fastq fastq 13308976014.0 44069457.0 L1EHE2301607 SK2.R1.raw.fastq.gz 0:151 1:151 A:3569709366;C:3066880930;G:3123966592;T:3548366304;N:52822 151 151     3569709366 3066880930 3123966592 3548366304 52822 SRX27451077 SRS23877575 SRA2059104 South China Normal University|School of Environment South China Normal University                       B B biological fallback assumption illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   China 2025-01-24 Pharyngula Embryo Cell Line Cell Line
34576 34576 SRR32105521 SRX27451076 SRS23877581 SRP559581 PRJNA1214993 Developmental toxicity of new psychoactive substance esketamine to zebrafish PRJNA1214993 Other New psychoactive substance esketamine has developmental toxicity and endocrine disrupting effects on zebrafish.       SK1 SK1   breed:not applicable|age:24 hpf|collection date:2023 05 23|geo loc name:China: Guangzhou|sex:not applicable|tissue:not applicable|cell line:ZF4 cell|order:13|BioSampleModel:Model organism or animal                 Developmental toxicity of new psychoactive substance esketamine to zebrafish SK1 SK1 cell     RNA-Seq TRANSCRIPTOMIC cDNA PAIRED ILLUMINA Illumina HiSeq 4000   SRP559581     L1EHE2301606--SK1.R1.raw.fastq.gz L1EHE2301606--SK1.R2.raw.fastq.gz fastq fastq 13251027348.0 43877574.0 L1EHE2301606 SK1.R1.raw.fastq.gz 0:151 1:151 A:3562385928;C:3046618953;G:3101399402;T:3540570730;N:52335 151 151     3562385928 3046618953 3101399402 3540570730 52335 SRX27451076 SRS23877581 SRA2059104 South China Normal University|School of Environment South China Normal University                       B B biological fallback assumption illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   China 2025-01-24 Pharyngula Embryo Cell Line Cell Line
34577 34577 SRR32105522 SRX27451075 SRS23877579 SRP559581 PRJNA1214993 Developmental toxicity of new psychoactive substance esketamine to zebrafish PRJNA1214993 Other New psychoactive substance esketamine has developmental toxicity and endocrine disrupting effects on zebrafish.       SC4 SC4   breed:not applicable|age:24 hpf|collection date:2023 05 23|geo loc name:China: Guangzhou|sex:not applicable|tissue:not applicable|cell line:ZF4 cell|order:12|BioSampleModel:Model organism or animal                 Developmental toxicity of new psychoactive substance esketamine to zebrafish SC4 SC4 cell     RNA-Seq TRANSCRIPTOMIC cDNA PAIRED ILLUMINA Illumina HiSeq 4000   SRP559581     L1EHE2301601--SC4.R1.raw.fastq.gz L1EHE2301601--SC4.R2.raw.fastq.gz fastq fastq 12694824888.0 42035844.0 L1EHE2301601 SC4.R1.raw.fastq.gz 0:151 1:151 A:3435956769;C:2884050436;G:2964456274;T:3410311062;N:50347 151 151     3435956769 2884050436 2964456274 3410311062 50347 SRX27451075 SRS23877579 SRA2059104 South China Normal University|School of Environment South China Normal University                       B B biological fallback assumption illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   China 2025-01-24 Pharyngula Embryo Cell Line Cell Line
34578 34578 SRR32105523 SRX27451074 SRS23877578 SRP559581 PRJNA1214993 Developmental toxicity of new psychoactive substance esketamine to zebrafish PRJNA1214993 Other New psychoactive substance esketamine has developmental toxicity and endocrine disrupting effects on zebrafish.       SC3 SC3   breed:not applicable|age:24 hpf|collection date:2023 05 23|geo loc name:China: Guangzhou|sex:not applicable|tissue:not applicable|cell line:ZF4 cell|order:11|BioSampleModel:Model organism or animal                 Developmental toxicity of new psychoactive substance esketamine to zebrafish SC3 SC3 cell     RNA-Seq TRANSCRIPTOMIC cDNA PAIRED ILLUMINA Illumina HiSeq 4000   SRP559581     L1EHE2301600--SC3.R1.raw.fastq.gz L1EHE2301600--SC3.R2.raw.fastq.gz fastq fastq 12586532218.0 41677259.0 L1EHE2301600 SC3.R1.raw.fastq.gz 0:151 1:151 A:3422332578;C:2845378360;G:2913592547;T:3405179722;N:49011 151 151     3422332578 2845378360 2913592547 3405179722 49011 SRX27451074 SRS23877578 SRA2059104 South China Normal University|School of Environment South China Normal University                       B B biological fallback assumption illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   China 2025-01-24 Pharyngula Embryo Cell Line Cell Line
64162 64162 SRR14308451 SRX10663885 SRS8758305 SRP315996 PRJNA724011 BDE 47 zebrafish 24hpf 4dpf PRJNA724011 Other           C3   strain:AB9|age:24hpf9|dev stage:24hpf9|sex:pooled male and female|tissue:wholefish|BioSampleModel:Model organism or animal                 AB9 L9 L9 paried end seq     RNA-Seq TRANSCRIPTOMIC RANDOM PCR PAIRED ILLUMINA Illumina MiSeq   SRP315996     C3.raw_1.fastq.gz C3.raw_2.fastq.gz fastq fastq 6301176600.0 21003922.0 C3.raw 1.fastq.gz 0:150 1:150 A:1665737962;C:1471580978;G:1530541563;T:1633084943;N:231154 150 150     1665737962 1471580978 1530541563 1633084943 231154 SRX10663885 SRS8758305 SRA1222808 Shantou University|Medical Colleg Shantou University 2 0.93548 0.93245 0.07291 0.07262 0.76479 0.76779 0.47781 0.4799 150 150 B B biological fallback assumption illumina miseq unknown random_priming unknown bulk unknown unknown   China 2021-04-27 Pharyngula Embryo Cell Line Cell Line

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CREATE TABLE run_metadata("run.accession" VARCHAR, "experiment.accession" VARCHAR, "sample.accession" VARCHAR, "study.accession" VARCHAR, bioproject VARCHAR, "study.title" VARCHAR, "study.alias" VARCHAR, "study.type" VARCHAR, "study.abstract" VARCHAR, "study.attributes" VARCHAR, "study.PMIDs" VARCHAR, "sample.description" VARCHAR, "sample.title" VARCHAR, "sample.alias" VARCHAR, "sample.centername" VARCHAR, "sample.attributes" VARCHAR, "GEOsample.title" VARCHAR, "GEOsample.dataprocessing" VARCHAR, "GEOsample.source" VARCHAR, "GEOsample.treatmentprotocol" VARCHAR, "GEOsample.extractprotocol" VARCHAR, "GEOsample.growthprotocol" VARCHAR, "GEOsample.characteristics" VARCHAR, "GEOsample.accession" VARCHAR, "experiment.title" VARCHAR, "experiment.alias" VARCHAR, "experiment.library_name" VARCHAR, "experiment.design_description" VARCHAR, "experiment.library_construction_protocol" VARCHAR, "experiment.attributes" VARCHAR, "experiment.library_strategy" VARCHAR, "experiment.library_source" VARCHAR, "experiment.library_selection" VARCHAR, "experiment.library_layout" VARCHAR, "experiment.platform" VARCHAR, "experiment.instrument_model" VARCHAR, "experiment.spot_descriptor" VARCHAR, "experiment.study_ref" VARCHAR, "run.title" VARCHAR, "run.attributes" VARCHAR, "run.filename" VARCHAR, "run.semantic_name" VARCHAR, "run.total_bases" DOUBLE, "run.total_spots" DOUBLE, "run.alias" VARCHAR, "run.read_lengths" VARCHAR, "run.base_counts" VARCHAR, "run.r1_length" BIGINT, "run.r2_length" BIGINT, "run.r3_length" BIGINT, "run.r4_length" BIGINT, "run.Acount" BIGINT, "run.Ccount" BIGINT, "run.Gcount" BIGINT, "run.Tcount" BIGINT, "run.Ncount" BIGINT, "run.experiment" VARCHAR, "run.pool_member" VARCHAR, "submission.accession" VARCHAR, "submission.srasource" VARCHAR, "submission.bioprojectsource" VARCHAR, "seqdetective.n_mates" BIGINT, "seqdetective.mapping_rate.mate1" DOUBLE, "seqdetective.mapping_rate.mate2" DOUBLE, "seqdetective.nofeature_rate.mate1" DOUBLE, "seqdetective.nofeature_rate.mate2" DOUBLE, "seqdetective.sparsity.mate1" DOUBLE, "seqdetective.sparsity.mate2" DOUBLE, "seqdetective.pos_strand_rate.mate1" DOUBLE, "seqdetective.pos_strand_rate.mate2" DOUBLE, "seqdetective.readlen.mate1" BIGINT, "seqdetective.readlen.mate2" BIGINT, "seqdetective.judgement.mate1" VARCHAR, "seqdetective.judgement.mate2" VARCHAR, "seqdetective.judgement.reason" VARCHAR, platform_family VARCHAR, instrument_generation VARCHAR, read_bias VARCHAR, selection_class VARCHAR, prep_kit VARCHAR, sc_or_bulk VARCHAR, tech_class VARCHAR, technology VARCHAR, tech_variant VARCHAR, "submission.bioprojectsource.country" VARCHAR, earliest_date DATE, devstage_curation VARCHAR, devstage_curation_coarse VARCHAR, tissue_curation VARCHAR, tissue_curation_coarse VARCHAR);;
CREATE INDEX idx_run_bioproject ON run_metadata(bioproject);;
CREATE INDEX idx_run_run_accession ON run_metadata("run.accession");;