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62 rows where devstage_curation = "Hatching" and tissue_curation_coarse = "Cell Line"

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tissue_curation_coarse 1

  • Cell Line · 62 ✖

tissue_curation 1

technology 1

experiment.platform 1

experiment.library_strategy 1

experiment.library_source 1

experiment.library_selection 1

experiment.library_layout 1

devstage_curation_coarse 1

devstage_curation 1

  • Hatching · 62 ✖
Link rowid ▼ run.accession experiment.accession sample.accession study.accession bioproject study.title study.alias study.type study.abstract study.attributes study.PMIDs sample.description sample.title sample.alias sample.centername sample.attributes GEOsample.title GEOsample.dataprocessing GEOsample.source GEOsample.treatmentprotocol GEOsample.extractprotocol GEOsample.growthprotocol GEOsample.characteristics GEOsample.accession experiment.title experiment.alias experiment.library_name experiment.design_description experiment.library_construction_protocol experiment.attributes experiment.library_strategy experiment.library_source experiment.library_selection experiment.library_layout experiment.platform experiment.instrument_model experiment.spot_descriptor experiment.study_ref run.title run.attributes run.filename run.semantic_name run.total_bases run.total_spots run.alias run.read_lengths run.base_counts run.r1_length run.r2_length run.r3_length run.r4_length run.Acount run.Ccount run.Gcount run.Tcount run.Ncount run.experiment run.pool_member submission.accession submission.srasource submission.bioprojectsource seqdetective.n_mates seqdetective.mapping_rate.mate1 seqdetective.mapping_rate.mate2 seqdetective.nofeature_rate.mate1 seqdetective.nofeature_rate.mate2 seqdetective.sparsity.mate1 seqdetective.sparsity.mate2 seqdetective.pos_strand_rate.mate1 seqdetective.pos_strand_rate.mate2 seqdetective.readlen.mate1 seqdetective.readlen.mate2 seqdetective.judgement.mate1 seqdetective.judgement.mate2 seqdetective.judgement.reason platform_family instrument_generation read_bias selection_class prep_kit sc_or_bulk tech_class technology tech_variant submission.bioprojectsource.country earliest_date devstage_curation devstage_curation_coarse tissue_curation tissue_curation_coarse
10452 10452 ERR9267591 ERX8810014 ERS10996143 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393652 University of Heidelberg Compound:2 Mhex|Concentration:110.5 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393652|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 48h run4 C09|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 48h run4 C09|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 48h run4 C09 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_48h_run4_C09.fastq.gz fastq 73547800.0 1470956.0 S TOXR1835:S 2 Mhex EC10 48h run4 C09 r 0:50 A:15203281;C:19662939;G:18154185;T:20526838;N:557 50       15203281 19662939 18154185 20526838 557 ERX8810014 ERS10996143 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10458 10458 ERR9267534 ERX8809957 ERS10996086 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393595 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393595|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_48h_run2.fastq.gz fastq 67366250.0 1347325.0 S TOXR1835:S VPA EC10 48h run2 r 0:50 A:13717398;C:17804386;G:16137194;T:19706738;N:534 50       13717398 17804386 16137194 19706738 534 ERX8809957 ERS10996086 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10461 10461 ERR9267561 ERX8809984 ERS10996113 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393622 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393622|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_48h_run3.fastq.gz fastq 78064750.0 1561295.0 S TOXR1835:S 2 Ebut EC20 48h run3 r 0:50 A:15756649;C:20956143;G:18904818;T:22446503;N:637 50       15756649 20956143 18904818 22446503 637 ERX8809984 ERS10996113 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10466 10466 ERR9267593 ERX8810016 ERS10996145 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393654 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393654|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 48h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 48h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_48h_run5.fastq.gz fastq 71625600.0 1432512.0 S TOXR1835:S NK 48h run5 r 0:50 A:14725047;C:18910123;G:17229035;T:20760764;N:631 50       14725047 18910123 17229035 20760764 631 ERX8810016 ERS10996145 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10468 10468 ERR9267590 ERX8810013 ERS10996142 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393651 University of Heidelberg Compound:2 Mhex|Concentration:221.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393651|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 48h run4 B09|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 48h run4 B09|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 48h run4 B09 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_48h_run4_B09.fastq.gz fastq 78479400.0 1569588.0 S TOXR1835:S 2 Mhex EC10 48h run4 B09 r 0:50 A:16162085;C:20836101;G:18922307;T:22558262;N:645 50       16162085 20836101 18922307 22558262 645 ERX8810013 ERS10996142 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10470 10470 ERR9267573 ERX8809996 ERS10996125 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393634 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393634|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S DMSO 48h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S DMSO 48h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 48h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_48h_run4.fastq.gz fastq 73082100.0 1461642.0 S TOXR1835:S DMSO 48h run4 r 0:50 A:14881867;C:19585099;G:17922397;T:20692144;N:593 50       14881867 19585099 17922397 20692144 593 ERX8809996 ERS10996125 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10476 10476 ERR9267535 ERX8809958 ERS10996087 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393596 University of Heidelberg Compound:VPA|Concentration:21.5 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393596|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA 1 2EC10 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA 1 2EC10 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_48h_run2.fastq.gz fastq 73399450.0 1467989.0 S TOXR1835:S VPA 1 2EC10 48h run2 r 0:50 A:14822778;C:19573143;G:17695184;T:21307767;N:578 50       14822778 19573143 17695184 21307767 578 ERX8809958 ERS10996087 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10479 10479 ERR9267523 ERX8809946 ERS10996075 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393584 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393584|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_48h_run1.fastq.gz fastq 68542050.0 1370841.0 S TOXR1835:S 2 Mhex EC20 48h run1 r 0:50 A:14024232;C:18238849;G:16815901;T:19462492;N:576 50       14024232 18238849 16815901 19462492 576 ERX8809946 ERS10996075 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10480 10480 ERR9267578 ERX8810001 ERS10996130 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393639 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393639|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 48h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 48h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 48h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_48h_run4.fastq.gz fastq 74138000.0 1482760.0 S TOXR1835:S VPA EC10 48h run4 r 0:50 A:15200941;C:19770845;G:18010004;T:21155539;N:671 50       15200941 19770845 18010004 21155539 671 ERX8810001 ERS10996130 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10484 10484 ERR9267579 ERX8810002 ERS10996131 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393640 University of Heidelberg Compound:VPA|Concentration:21.5 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393640|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA 1 2EC10 48h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA 1 2EC10 48h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 48h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_48h_run4.fastq.gz fastq 71560000.0 1431200.0 S TOXR1835:S VPA 1 2EC10 48h run4 r 0:50 A:14689062;C:19057908;G:17423224;T:20389200;N:606 50       14689062 19057908 17423224 20389200 606 ERX8810002 ERS10996131 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10486 10486 ERR9267524 ERX8809947 ERS10996076 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393585 University of Heidelberg Compound:2 Mhex|Concentration:221.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393585|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_48h_run1.fastq.gz fastq 66823650.0 1336473.0 S TOXR1835:S 2 Mhex EC10 48h run1 r 0:50 A:13627080;C:17870281;G:16395274;T:18930502;N:513 50       13627080 17870281 16395274 18930502 513 ERX8809947 ERS10996076 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10487 10487 ERR9267569 ERX8809992 ERS10996121 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393630 University of Heidelberg Compound:2 Mhex|Concentration:110.5 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393630|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex 1 2EC10 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex 1 2EC10 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex 1 2EC10 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_1-2EC10_48h_run3.fastq.gz fastq 68861900.0 1377238.0 S TOXR1835:S 2 Mhex 1 2EC10 48h run3 r 0:50 A:13973560;C:18399768;G:16700087;T:19787899;N:586 50       13973560 18399768 16700087 19787899 586 ERX8809992 ERS10996121 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10489 10489 ERR9267513 ERX8809936 ERS10996065 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393574 University of Heidelberg Compound:VPA|Concentration:21.5 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393574|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA 1 2EC10 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA 1 2EC10 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_48h_run1.fastq.gz fastq 63721950.0 1274439.0 S TOXR1835:S VPA 1 2EC10 48h run1 r 0:50 A:13080828;C:17351354;G:15603067;T:17686116;N:585 50       13080828 17351354 15603067 17686116 585 ERX8809936 ERS10996065 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10494 10494 ERR9267525 ERX8809948 ERS10996077 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393586 University of Heidelberg Compound:2 Mhex|Concentration:110.5 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393586|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex 1 2EC10 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex 1 2EC10 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex 1 2EC10 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_1-2EC10_48h_run1.fastq.gz fastq 67408050.0 1348161.0 S TOXR1835:S 2 Mhex 1 2EC10 48h run1 r 0:50 A:13792359;C:17904560;G:16483974;T:19226594;N:563 50       13792359 17904560 16483974 19226594 563 ERX8809948 ERS10996077 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10496 10496 ERR9267511 ERX8809934 ERS10996063 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393572 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393572|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_48h_run1.fastq.gz fastq 70277250.0 1405545.0 S TOXR1835:S VPA EC20 48h run1 r 0:50 A:14198964;C:19021887;G:17302994;T:19752851;N:554 50       14198964 19021887 17302994 19752851 554 ERX8809934 ERS10996063 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10497 10497 ERR9267556 ERX8809979 ERS10996108 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393617 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393617|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_48h_run3.fastq.gz fastq 69142000.0 1382840.0 S TOXR1835:S VPA EC10 48h run3 r 0:50 A:13995831;C:18385053;G:16704246;T:20056299;N:571 50       13995831 18385053 16704246 20056299 571 ERX8809979 ERS10996108 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10500 10500 ERR9267551 ERX8809974 ERS10996103 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393612 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393612|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S DMSO 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S DMSO 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_48h_run3.fastq.gz fastq 60861450.0 1217229.0 S TOXR1835:S DMSO 48h run3 r 0:50 A:12333828;C:16098263;G:14632351;T:17796489;N:519 50       12333828 16098263 14632351 17796489 519 ERX8809974 ERS10996103 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10501 10501 ERR9267568 ERX8809991 ERS10996120 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393629 University of Heidelberg Compound:2 Mhex|Concentration:221.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393629|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_48h_run3.fastq.gz fastq 68035550.0 1360711.0 S TOXR1835:S 2 Mhex EC10 48h run3 r 0:50 A:13826663;C:18115373;G:16605120;T:19487836;N:558 50       13826663 18115373 16605120 19487836 558 ERX8809991 ERS10996120 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10502 10502 ERR9267585 ERX8810008 ERS10996137 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393646 University of Heidelberg Compound:2 Ebut|Concentration:139.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393646|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut 1 2EC10 48h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut 1 2EC10 48h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 48h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_48h_run4.fastq.gz fastq 74677950.0 1493559.0 S TOXR1835:S 2 Ebut 1 2EC10 48h run4 r 0:50 A:15203705;C:19865728;G:18407584;T:21200325;N:608 50       15203705 19865728 18407584 21200325 608 ERX8810008 ERS10996137 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10513 10513 ERR9267539 ERX8809962 ERS10996091 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393600 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393600|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_48h_run2.fastq.gz fastq 67424650.0 1348493.0 S TOXR1835:S 2 Ebut EC20 48h run2 r 0:50 A:13694254;C:18014496;G:16206609;T:19508741;N:550 50       13694254 18014496 16206609 19508741 550 ERX8809962 ERS10996091 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10517 10517 ERR9267584 ERX8810007 ERS10996136 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393645 University of Heidelberg Compound:2 Ebut|Concentration:278.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393645|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC10 48h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC10 48h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 48h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_48h_run4.fastq.gz fastq 70090700.0 1401814.0 S TOXR1835:S 2 Ebut EC10 48h run4 r 0:50 A:14240762;C:18647482;G:17073445;T:20128406;N:605 50       14240762 18647482 17073445 20128406 605 ERX8810007 ERS10996136 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10521 10521 ERR9267611 ERX8810034 ERS10996163 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393672 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393672|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 48h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 48h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_48h_run5.fastq.gz fastq 69905350.0 1398107.0 S TOXR1835:S 2 Mhex EC20 48h run5 r 0:50 A:14517997;C:18401099;G:16823939;T:20161750;N:565 50       14517997 18401099 16823939 20161750 565 ERX8810034 ERS10996163 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10525 10525 ERR9267527 ERX8809950 ERS10996079 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393588 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393588|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_48h_run2.fastq.gz fastq 69118500.0 1382370.0 S TOXR1835:S NK 48h run2 r 0:50 A:14136001;C:18163834;G:16786976;T:20031136;N:553 50       14136001 18163834 16786976 20031136 553 ERX8809950 ERS10996079 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10529 10529 ERR9267518 ERX8809941 ERS10996070 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393579 University of Heidelberg Compound:2 Ebut|Concentration:278.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393579|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC10 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC10 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_48h_run1.fastq.gz fastq 75266500.0 1505330.0 S TOXR1835:S 2 Ebut EC10 48h run1 r 0:50 A:15221491;C:20236124;G:18292558;T:21515646;N:681 50       15221491 20236124 18292558 21515646 681 ERX8809941 ERS10996070 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10532 10532 ERR9267507 ERX8809930 ERS10996059 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393568 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393568|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S DMSO 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S DMSO 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_48h_run1.fastq.gz fastq 67554500.0 1351090.0 S TOXR1835:S DMSO 48h run1 r 0:50 A:13499007;C:18082251;G:16703769;T:19268869;N:604 50       13499007 18082251 16703769 19268869 604 ERX8809930 ERS10996059 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10534 10534 ERR9267571 ERX8809994 ERS10996123 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393632 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393632|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 48h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 48h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 48h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_48h_run4.fastq.gz fastq 72037700.0 1440754.0 S TOXR1835:S NK 48h run4 r 0:50 A:14745794;C:19202607;G:17512611;T:20576149;N:539 50       14745794 19202607 17512611 20576149 539 ERX8809994 ERS10996123 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10539 10539 ERR9267562 ERX8809985 ERS10996114 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393623 University of Heidelberg Compound:2 Ebut|Concentration:278.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393623|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC10 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC10 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_48h_run3.fastq.gz fastq 67908650.0 1358173.0 S TOXR1835:S 2 Ebut EC10 48h run3 r 0:50 A:13740262;C:18142439;G:16364747;T:19660619;N:583 50       13740262 18142439 16364747 19660619 583 ERX8809985 ERS10996114 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10542 10542 ERR9267577 ERX8810000 ERS10996129 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393638 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393638|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 48h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 48h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 48h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_48h_run4.fastq.gz fastq 72161650.0 1443233.0 S TOXR1835:S VPA EC20 48h run4 r 0:50 A:14871161;C:19270264;G:17837781;T:20181814;N:630 50       14871161 19270264 17837781 20181814 630 ERX8810000 ERS10996129 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10546 10546 ERR9267549 ERX8809972 ERS10996101 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393610 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393610|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_48h_run3.fastq.gz fastq 66542850.0 1330857.0 S TOXR1835:S NK 48h run3 r 0:50 A:13510144;C:17455383;G:16160281;T:19416444;N:598 50       13510144 17455383 16160281 19416444 598 ERX8809972 ERS10996101 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10548 10548 ERR9267563 ERX8809986 ERS10996115 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393624 University of Heidelberg Compound:2 Ebut|Concentration:139.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393624|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut 1 2EC10 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut 1 2EC10 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_48h_run3.fastq.gz fastq 60900900.0 1218018.0 S TOXR1835:S 2 Ebut 1 2EC10 48h run3 r 0:50 A:12410877;C:16198724;G:14618554;T:17672248;N:497 50       12410877 16198724 14618554 17672248 497 ERX8809986 ERS10996115 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10551 10551 ERR9267607 ERX8810030 ERS10996159 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393668 University of Heidelberg Compound:2 Ebut|Concentration:139.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393668|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut 1 2EC10 48h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut 1 2EC10 48h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_48h_run5.fastq.gz fastq 77392800.0 1547856.0 S TOXR1835:S 2 Ebut 1 2EC10 48h run5 r 0:50 A:15730501;C:20403721;G:19014742;T:22243210;N:626 50       15730501 20403721 19014742 22243210 626 ERX8810030 ERS10996159 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10553 10553 ERR9267519 ERX8809942 ERS10996071 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393580 University of Heidelberg Compound:2 Ebut|Concentration:139.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393580|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut 1 2EC10 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut 1 2EC10 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_48h_run1.fastq.gz fastq 72942450.0 1458849.0 S TOXR1835:S 2 Ebut 1 2EC10 48h run1 r 0:50 A:14793102;C:19587590;G:17790376;T:20770862;N:520 50       14793102 19587590 17790376 20770862 520 ERX8809942 ERS10996071 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10554 10554 ERR9267541 ERX8809964 ERS10996093 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393602 University of Heidelberg Compound:2 Ebut|Concentration:139.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393602|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut 1 2EC10 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut 1 2EC10 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut 1 2EC10 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_1-2EC10_48h_run2.fastq.gz fastq 76523500.0 1530470.0 S TOXR1835:S 2 Ebut 1 2EC10 48h run2 r 0:50 A:15471207;C:20517558;G:18610047;T:21924105;N:583 50       15471207 20517558 18610047 21924105 583 ERX8809964 ERS10996093 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10557 10557 ERR9267505 ERX8809928 ERS10996057 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393566 University of Heidelberg Compound:H2O|Concentration:nan nan|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393566|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S NK 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S NK 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S NK 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_NK_48h_run1.fastq.gz fastq 70453750.0 1409075.0 S TOXR1835:S NK 48h run1 r 0:50 A:14163774;C:18922311;G:17592711;T:19774383;N:571 50       14163774 18922311 17592711 19774383 571 ERX8809928 ERS10996057 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10560 10560 ERR9267533 ERX8809956 ERS10996085 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393594 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393594|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_48h_run2.fastq.gz fastq 66631450.0 1332629.0 S TOXR1835:S VPA EC20 48h run2 r 0:50 A:13583196;C:17640936;G:15931969;T:19474795;N:554 50       13583196 17640936 15931969 19474795 554 ERX8809956 ERS10996085 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10561 10561 ERR9267546 ERX8809969 ERS10996098 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393607 University of Heidelberg Compound:2 Mhex|Concentration:221.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393607|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_48h_run2.fastq.gz fastq 69391250.0 1387825.0 S TOXR1835:S 2 Mhex EC10 48h run2 r 0:50 A:14061451;C:18482829;G:16834845;T:20011594;N:531 50       14061451 18482829 16834845 20011594 531 ERX8809969 ERS10996098 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10571 10571 ERR9267589 ERX8810012 ERS10996141 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393650 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393650|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 48h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 48h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 48h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_48h_run4.fastq.gz fastq 73471850.0 1469437.0 S TOXR1835:S 2 Mhex EC20 48h run4 r 0:50 A:15182153;C:19485922;G:17921518;T:20881652;N:605 50       15182153 19485922 17921518 20881652 605 ERX8810012 ERS10996141 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10572 10572 ERR9267595 ERX8810018 ERS10996147 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393656 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393656|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S DMSO 48h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S DMSO 48h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_48h_run5.fastq.gz fastq 483150.0 9663.0 S TOXR1835:S DMSO 48h run5 r 0:50 A:132538;C:123309;G:102107;T:125195;N:1 50       132538 123309 102107 125195 1 ERX8810018 ERS10996147 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10573 10573 ERR9267545 ERX8809968 ERS10996097 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393606 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393606|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_48h_run2.fastq.gz fastq 69703750.0 1394075.0 S TOXR1835:S 2 Mhex EC20 48h run2 r 0:50 A:14195637;C:18573126;G:16963229;T:19971173;N:585 50       14195637 18573126 16963229 19971173 585 ERX8809968 ERS10996097 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10576 10576 ERR9267605 ERX8810028 ERS10996157 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393666 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393666|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 48h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 48h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_48h_run5.fastq.gz fastq 67412850.0 1348257.0 S TOXR1835:S 2 Ebut EC20 48h run5 r 0:50 A:13766964;C:17757638;G:16672345;T:19215358;N:545 50       13766964 17757638 16672345 19215358 545 ERX8810028 ERS10996157 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10580 10580 ERR9267612 ERX8810035 ERS10996164 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393673 University of Heidelberg Compound:2 Mhex|Concentration:221.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393673|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC10 48h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC10 48h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC10 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC10_48h_run5.fastq.gz fastq 66876800.0 1337536.0 S TOXR1835:S 2 Mhex EC10 48h run5 r 0:50 A:13834575;C:17625681;G:16026254;T:19389760;N:530 50       13834575 17625681 16026254 19389760 530 ERX8810035 ERS10996164 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10586 10586 ERR9267583 ERX8810006 ERS10996135 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393644 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393644|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 48h run4|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 48h run4|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 48h run4 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_48h_run4.fastq.gz fastq 79026950.0 1580539.0 S TOXR1835:S 2 Ebut EC20 48h run4 r 0:50 A:16191989;C:20840113;G:19258881;T:22735319;N:648 50       16191989 20840113 19258881 22735319 648 ERX8810006 ERS10996135 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10587 10587 ERR9267613 ERX8810036 ERS10996165 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1835:S 2 Mhex 1 2EC10 48h run5   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:2 Mhex|scientific name:Danio rerio|Concentration:110.5 µM|Exposure time:48 hpf name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex 1 2EC10 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_1-2EC10_48h_run5.fastq.gz fastq 66428550.0 1328571.0 S TOXR1835:S 2 Mhex 1 2EC10 48h run5 r 0:50 A:13662294;C:17664056;G:16182301;T:18919344;N:555 50       13662294 17664056 16182301 18919344 555 ERX8810036 ERS10996165 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10589 10589 ERR9267540 ERX8809963 ERS10996092 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393601 University of Heidelberg Compound:2 Ebut|Concentration:278.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393601|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC10 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC10 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_48h_run2.fastq.gz fastq 64438900.0 1288778.0 S TOXR1835:S 2 Ebut EC10 48h run2 r 0:50 A:13013730;C:17191568;G:15496489;T:18736544;N:569 50       13013730 17191568 15496489 18736544 569 ERX8809963 ERS10996092 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10590 10590 ERR9267599 ERX8810022 ERS10996151 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393660 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393660|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 48h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 48h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_48h_run5.fastq.gz fastq 62577300.0 1251546.0 S TOXR1835:S VPA EC20 48h run5 r 0:50 A:12927528;C:16490152;G:15013269;T:18145828;N:523 50       12927528 16490152 15013269 18145828 523 ERX8810022 ERS10996151 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10595 10595 ERR9267517 ERX8809940 ERS10996069 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393578 University of Heidelberg Compound:2 Ebut|Concentration:340.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393578|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Ebut EC20 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Ebut EC20 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC20 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC20_48h_run1.fastq.gz fastq 73931850.0 1478637.0 S TOXR1835:S 2 Ebut EC20 48h run1 r 0:50 A:14923927;C:19913225;G:18289511;T:20804610;N:577 50       14923927 19913225 18289511 20804610 577 ERX8809940 ERS10996069 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10602 10602 ERR9267529 ERX8809952 ERS10996081 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393590 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393590|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S DMSO 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S DMSO 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S DMSO 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_DMSO_48h_run2.fastq.gz fastq 71101200.0 1422024.0 S TOXR1835:S DMSO 48h run2 r 0:50 A:14497088;C:18633880;G:17219984;T:20749637;N:611 50       14497088 18633880 17219984 20749637 611 ERX8809952 ERS10996081 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10604 10604 ERR9267567 ERX8809990 ERS10996119 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393628 University of Heidelberg Compound:2 Mhex|Concentration:253.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393628|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex EC20 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex EC20 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex EC20 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_EC20_48h_run3.fastq.gz fastq 68889400.0 1377788.0 S TOXR1835:S 2 Mhex EC20 48h run3 r 0:50 A:14105273;C:18364899;G:16733064;T:19685604;N:560 50       14105273 18364899 16733064 19685604 560 ERX8809990 ERS10996119 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10608 10608 ERR9267555 ERX8809978 ERS10996107 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393616 University of Heidelberg Compound:VPA|Concentration:54.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393616|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:05Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC20 48h run3|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC20 48h run3|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC20 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC20_48h_run3.fastq.gz fastq 74544700.0 1490894.0 S TOXR1835:S VPA EC20 48h run3 r 0:50 A:15276457;C:19927478;G:18142128;T:21198080;N:557 50       15276457 19927478 18142128 21198080 557 ERX8809978 ERS10996107 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10609 10609 ERR9267606 ERX8810029 ERS10996158 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1835:S 2 Ebut EC10 48h run5   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:2 Ebut|scientific name:Danio rerio|Concentration:278.0 µM|Exposure time:48 hpf name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Ebut EC10 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Ebut_EC10_48h_run5.fastq.gz fastq 74809150.0 1496183.0 S TOXR1835:S 2 Ebut EC10 48h run5 r 0:50 A:15289611;C:19739104;G:18188745;T:21591144;N:546 50       15289611 19739104 18188745 21591144 546 ERX8810029 ERS10996158 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10611 10611 ERR9267600 ERX8810023 ERS10996152 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393661 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393661|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:06Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 48h run5|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 48h run5|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_48h_run5.fastq.gz fastq 66933400.0 1338668.0 S TOXR1835:S VPA EC10 48h run5 r 0:50 A:13563920;C:17744966;G:16018510;T:19605421;N:583 50       13563920 17744966 16018510 19605421 583 ERX8810023 ERS10996152 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10613 10613 ERR9267512 ERX8809935 ERS10996064 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393573 University of Heidelberg Compound:VPA|Concentration:43.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393573|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:03Z|INSDC status:public|Submitter Id:S TOXR1835:S VPA EC10 48h run1|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S VPA EC10 48h run1|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA EC10 48h run1 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_EC10_48h_run1.fastq.gz fastq 74515500.0 1490310.0 S TOXR1835:S VPA EC10 48h run1 r 0:50 A:14918959;C:20202214;G:18256549;T:21137183;N:595 50       14918959 20202214 18256549 21137183 595 ERX8809935 ERS10996064 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10618 10618 ERR9267557 ERX8809980 ERS10996109 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1835:S VPA 1 2EC10 48h run3   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:VPA|scientific name:Danio rerio|Concentration:21.5 µM|Exposure time:48 hpf name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 48h run3 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_48h_run3.fastq.gz fastq 64259050.0 1285181.0 S TOXR1835:S VPA 1 2EC10 48h run3 r 0:50 A:13075721;C:17144963;G:15448716;T:18589136;N:514 50       13075721 17144963 15448716 18589136 514 ERX8809980 ERS10996109 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10620 10620 ERR9267601 ERX8810024 ERS10996153 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1835:S VPA 1 2EC10 48h run5   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:VPA|scientific name:Danio rerio|Concentration:21.5 µM|Exposure time:48 hpf name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1835:S VPA 1 2EC10 48h run5 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_VPA_1-2EC10_48h_run5.fastq.gz fastq 72083750.0 1441675.0 S TOXR1835:S VPA 1 2EC10 48h run5 r 0:50 A:14776717;C:19029282;G:17151119;T:21126048;N:584 50       14776717 19029282 17151119 21126048 584 ERX8810024 ERS10996153 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10622 10622 ERR9267547 ERX8809970 ERS10996099 ERP136287 PRJEB51640 CS2 UHEI DART 96 120h raw data EUT080 S-TOXR1835 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13393608 University of Heidelberg Compound:2 Mhex|Concentration:110.5 µM|ENA first public:2024 03 15|Exposure time:48 hpf Id:SAMEA13393608|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:42:04Z|INSDC status:public|Submitter Id:S TOXR1835:S 2 Mhex 1 2EC10 48h run2|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1835:S 2 Mhex 1 2EC10 48h run2|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1835:S 2 Mhex 1 2EC10 48h run2 e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136287 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_2-Mhex_1-2EC10_48h_run2.fastq.gz fastq 66991750.0 1339835.0 S TOXR1835:S 2 Mhex 1 2EC10 48h run2 r 0:50 A:13672674;C:17839869;G:16313161;T:19165508;N:538 50       13672674 17839869 16313161 19165508 538 ERX8809970 ERS10996099 ERA10091655 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10635 10635 ERR9269920 ERX8812317 ERS10998383 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395729 University of Heidelberg Compound:VPA|Concentration:2.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf|External Id:SAMEA13395729|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 48hpf VPA2 UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 48hpf VPA2 UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 48hpf VPA2 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_48hpf_VPA2_UHEI.fastq.gz fastq 47599250.0 951985.0 S TOXR1832:S 48hpf VPA2 UHEI r 0:50 A:9888024;C:12159720;G:11046493;T:14498755;N:6258 50       9888024 12159720 11046493 14498755 6258 ERX8812317 ERS10998383 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10636 10636 ERR9269908 ERX8812305 ERS10998371 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395717 University of Heidelberg Compound:VPA|Concentration:200.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf|External Id:SAMEA13395717|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 48hpf VPA200 UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 48hpf VPA200 UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 48hpf VPA200 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_48hpf_VPA200_UHEI.fastq.gz fastq 79585850.0 1591717.0 S TOXR1832:S 48hpf VPA200 UHEI r 0:50 A:16570024;C:20607975;G:18883064;T:23514364;N:10423 50       16570024 20607975 18883064 23514364 10423 ERX8812305 ERS10998371 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10637 10637 ERR9269905 ERX8812302 ERS10998367 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395714 University of Heidelberg Compound:DMSO|Concentration:0.1 %|ENA first public:2024 03 15|Exposure time:48 hpf|External Id:SAMEA13395714|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 48hpf DMSO UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 48hpf DMSO UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 48hpf DMSO UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_48hpf_DMSO_UHEI.fastq.gz fastq 81583950.0 1631679.0 S TOXR1832:S 48hpf DMSO UHEI r 0:50 A:16850155;C:21271726;G:19396178;T:24055405;N:10486 50       16850155 21271726 19396178 24055405 10486 ERX8812302 ERS10998367 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10640 10640 ERR9269917 ERX8812314 ERS10998380 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395726 University of Heidelberg Compound:VPA|Concentration:10.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf|External Id:SAMEA13395726|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 48hpf VPA10 UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 48hpf VPA10 UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 48hpf VPA10 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_48hpf_VPA10_UHEI.fastq.gz fastq 67426000.0 1348520.0 S TOXR1832:S 48hpf VPA10 UHEI r 0:50 A:14029838;C:17712723;G:16312528;T:19361892;N:9019 50       14029838 17712723 16312528 19361892 9019 ERX8812314 ERS10998380 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10642 10642 ERR9269902 ERX8812299 ERS10998364 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395711 University of Heidelberg Compound:H2O|Concentration:nan µM|ENA first public:2024 03 15|Exposure time:48 hpf|External Id:SAMEA13395711|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:11Z|INSDC status:public|Submitter Id:S TOXR1832:S 48hpf NK UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 48hpf NK UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 48hpf NK UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_48hpf_NK_UHEI.fastq.gz fastq 62338300.0 1246766.0 S TOXR1832:S 48hpf NK UHEI r 0:50 A:12918525;C:16663516;G:15757264;T:16990654;N:8341 50       12918525 16663516 15757264 16990654 8341 ERX8812299 ERS10998364 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10644 10644 ERR9269914 ERX8812311 ERS10998377 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       S TOXR1832:S 48hpf VPA50 UHEI   Treatment:repeated dose|Treatment scheme:daily|organism:Danio rerio|cell line:null|Compound:VPA|scientific name:Danio rerio|Concentration:50.0 µM|Exposure time:48 hpf|Gender:null|common name:zebrafish|ENA LAST UPDATE:2022 03 15                 Illumina HiSeq 2500 sequencing S TOXR1832:S 48hpf VPA50 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_48hpf_VPA50_UHEI.fastq.gz fastq 91147100.0 1822942.0 S TOXR1832:S 48hpf VPA50 UHEI r 0:50 A:18945872;C:23376297;G:21393442;T:27419150;N:12339 50       18945872 23376297 21393442 27419150 12339 ERX8812311 ERS10998377 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line
10646 10646 ERR9269911 ERX8812308 ERS10998374 ERP136288 PRJEB51641 CS2 UHEI DART 96 120h raw data EUT053 S-TOXR1832 Transcriptome Analysis   ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15       SAMEA13395720 University of Heidelberg Compound:VPA|Concentration:100.0 µM|ENA first public:2024 03 15|Exposure time:48 hpf|External Id:SAMEA13395720|Gender:null|INSDC center name:University of Heidelberg|INSDC last update:2022 03 15T10:53:12Z|INSDC status:public|Submitter Id:S TOXR1832:S 48hpf VPA100 UHEI|Treatment:repeated dose|Treatment scheme:daily|broker name:EU ToxRisk DCC|cell line:null|common name:zebrafish|sample name:S TOXR1832:S 48hpf VPA100 UHEI|scientific name:Danio rerio                 Illumina HiSeq 2500 sequencing S TOXR1832:S 48hpf VPA100 UHEI e   TempO Seq library     RNA-Seq TRANSCRIPTOMIC cDNA SINGLE ILLUMINA Illumina HiSeq 2500   ERP136288 Illumina HiSeq 2500 sequencing ENA FIRST PUBLIC:2024 03 15|ENA LAST UPDATE:2024 03 15 S_48hpf_VPA100_UHEI.fastq.gz fastq 76050250.0 1521005.0 S TOXR1832:S 48hpf VPA100 UHEI r 0:50 A:15772070;C:19270371;G:17451795;T:23545874;N:10140 50       15772070 19270371 17451795 23545874 10140 ERX8812308 ERS10998374 ERA10091710 EMBL EBI EMBL EBI                       B   usable mapping rate illumina hiseq_era unknown cdna_unspecified unknown bulk unknown unknown   United Kingdom 2022-03-15 Hatching Embryo Cell Line Cell Line

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CREATE TABLE run_metadata("run.accession" VARCHAR, "experiment.accession" VARCHAR, "sample.accession" VARCHAR, "study.accession" VARCHAR, bioproject VARCHAR, "study.title" VARCHAR, "study.alias" VARCHAR, "study.type" VARCHAR, "study.abstract" VARCHAR, "study.attributes" VARCHAR, "study.PMIDs" VARCHAR, "sample.description" VARCHAR, "sample.title" VARCHAR, "sample.alias" VARCHAR, "sample.centername" VARCHAR, "sample.attributes" VARCHAR, "GEOsample.title" VARCHAR, "GEOsample.dataprocessing" VARCHAR, "GEOsample.source" VARCHAR, "GEOsample.treatmentprotocol" VARCHAR, "GEOsample.extractprotocol" VARCHAR, "GEOsample.growthprotocol" VARCHAR, "GEOsample.characteristics" VARCHAR, "GEOsample.accession" VARCHAR, "experiment.title" VARCHAR, "experiment.alias" VARCHAR, "experiment.library_name" VARCHAR, "experiment.design_description" VARCHAR, "experiment.library_construction_protocol" VARCHAR, "experiment.attributes" VARCHAR, "experiment.library_strategy" VARCHAR, "experiment.library_source" VARCHAR, "experiment.library_selection" VARCHAR, "experiment.library_layout" VARCHAR, "experiment.platform" VARCHAR, "experiment.instrument_model" VARCHAR, "experiment.spot_descriptor" VARCHAR, "experiment.study_ref" VARCHAR, "run.title" VARCHAR, "run.attributes" VARCHAR, "run.filename" VARCHAR, "run.semantic_name" VARCHAR, "run.total_bases" DOUBLE, "run.total_spots" DOUBLE, "run.alias" VARCHAR, "run.read_lengths" VARCHAR, "run.base_counts" VARCHAR, "run.r1_length" BIGINT, "run.r2_length" BIGINT, "run.r3_length" BIGINT, "run.r4_length" BIGINT, "run.Acount" BIGINT, "run.Ccount" BIGINT, "run.Gcount" BIGINT, "run.Tcount" BIGINT, "run.Ncount" BIGINT, "run.experiment" VARCHAR, "run.pool_member" VARCHAR, "submission.accession" VARCHAR, "submission.srasource" VARCHAR, "submission.bioprojectsource" VARCHAR, "seqdetective.n_mates" BIGINT, "seqdetective.mapping_rate.mate1" DOUBLE, "seqdetective.mapping_rate.mate2" DOUBLE, "seqdetective.nofeature_rate.mate1" DOUBLE, "seqdetective.nofeature_rate.mate2" DOUBLE, "seqdetective.sparsity.mate1" DOUBLE, "seqdetective.sparsity.mate2" DOUBLE, "seqdetective.pos_strand_rate.mate1" DOUBLE, "seqdetective.pos_strand_rate.mate2" DOUBLE, "seqdetective.readlen.mate1" BIGINT, "seqdetective.readlen.mate2" BIGINT, "seqdetective.judgement.mate1" VARCHAR, "seqdetective.judgement.mate2" VARCHAR, "seqdetective.judgement.reason" VARCHAR, platform_family VARCHAR, instrument_generation VARCHAR, read_bias VARCHAR, selection_class VARCHAR, prep_kit VARCHAR, sc_or_bulk VARCHAR, tech_class VARCHAR, technology VARCHAR, tech_variant VARCHAR, "submission.bioprojectsource.country" VARCHAR, earliest_date DATE, devstage_curation VARCHAR, devstage_curation_coarse VARCHAR, tissue_curation VARCHAR, tissue_curation_coarse VARCHAR);;
CREATE INDEX idx_run_bioproject ON run_metadata(bioproject);;
CREATE INDEX idx_run_run_accession ON run_metadata("run.accession");;