{"database": "metadata", "table": "run_metadata", "rows": [[65684, "SRR15498153", "SRX11797838", "SRS9797773", "SRP332839", "PRJNA755482", "miRNA sequencing from zebrafish testes and ovaries exposed to normal and high temperatures", "PRJNA755482", "Other", "We exposed zebrafish to elevated temperatures during early development  a treatment that is known to result in male skewed sex ratios  in order to understand the role of the epigenetic regulation mediated by miRNAs in the gonads.", null, null, null, "Testis High Temperature", "ZF 36 G11M", null, "strain:AB|age:90 dpf|sex:male|tissue:Testis|replicate:Biological replicate THT 1|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "miRNA seq of Danio rerio: adult treated testis", "36 G11", "36 G11", "NEBNext Small RNA Library Prep Set for Illumina was used on total RNA isolated from zebrafish testis using Qiagen RNeasy mini kit. Library was constructed using sequencing Lane 1x50  v4  HiSeq single end mode with a read length of 50 bp", null, null, "miRNA-Seq", "TRANSCRIPTOMIC", "RT-PCR", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP332839", null, null, "ZF_36_G11_22313_CAAAAG.fastq", "fastq", 309077000.0, 6181540.0, "ZF 36 G11 22313 CAAAAG.fastq", "0:50 1:0", "A:92340462;C:68123395;G:79403422;T:69172711;N:37010", 50, 0, null, null, 92340462, 68123395, 79403422, 69172711, 37010, "SRX11797838", "SRS9797773", "SRA1279325", "Institute of Marine Sciences|Repro-Immune Team", "Institute of Marine Sciences", 1, 0.68141, null, 0.45311, null, 0.86519, null, 0.52771, null, 50, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "small_rna", "nebnext", "bulk", "unknown", "unknown", null, "United States", "2021-08-17", "Adult", "Adult", "Gonad", "Reproductive System"]], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": ["rowid"], "primary_key_values": ["65684"], "units": {}, "query_ms": 11.255799006903544}