{"database": "metadata", "table": "run_metadata", "rows": [[64388, "SRR14679150", "SRX11017525", "SRS9089834", "SRP321802", "PRJNA733247", "Danio rerio breed:Danio Raw sequence reads", "PRJNA733247", "Whole Genome Sequencing", "zebrafish muscle tissue for scRNA seq and bulk RNA seq", null, null, null, "Model organism or animal sample from Danio rerio", "zebrafish", null, "breed:Danio|dev stage:60 day|sex:missing|tissue:muscle|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "scRNA seq", "runx2b+/+ scRNA seq", "runx2b+/+ scRNA seq", "tail muscle with intermuscular bone", null, null, "RNA-Seq", "TRANSCRIPTOMIC SINGLE CELL", "cDNA", "PAIRED", "ILLUMINA", "Illumina NovaSeq 6000", null, "SRP321802", null, null, "WT_S1_L003_R1_001.fastq.gz WT_S1_L003_R2_001.fastq.gz", "fastq fastq", 99838157100.0, 332793857.0, "WT S1 L003 R1 001.fastq.gz", "0:150 1:150", "A:30283010374;C:15529232903;G:16181518775;T:37842782328;N:1612720", 150, 150, null, null, 30283010374, 15529232903, 16181518775, 37842782328, 1612720, "SRX11017525", "SRS9089834", "SRA1238123", "Huazhong Agricultural university|Huazhong Agricultural university", "Huazhong Agricultural university", 2, 0.34302, 0.92611, 0.04637, 0.09453, 0.98701, 0.83658, 0.71917, 0.76074, 150, 150, "B", "B", "mate1-mate2 similar by mapping diff", "illumina", "novaseq_era", "unknown", "cdna_unspecified", "unknown", "sc", "bulk", "bulk", null, "China", "2021-05-29", "Juvenile", "Juvenile", "Muscle", "Muscular System"]], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": ["rowid"], "primary_key_values": ["64388"], "units": {}, "query_ms": 9.667397000157507}