{"database": "metadata", "table": "run_metadata", "rows": [[59026, "SRR11577271", "SRX8145092", "SRS6507828", "SRP257630", "PRJNA627056", "Impact of social isolation on brain transcriptome in zebrafish", "PRJNA627056", "Other", "The goal of the study was to identify genes or genetic modules that are associated with the presence/absence of conspecifics.", null, null, null, "14 social 1", "20170921  14dpf soc", null, "breed:Konstanz Wildtype|age:14 dpf|dev stage:juvenile|sex:not applicable|tissue:brain|biomaterial provider:Erin Schuman|collected by:Lukas Anneser|collection date:2017 09 21|sample type:whole brain|store cond:storage in trizol  immediate extraction|treatment:social|replicate:1|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of danio rerio: larval and juvenile brain", "D708 D506", "D708 D506", "RNA extraction from whole brain lysates  polyA enrichment  reverse transcription  and amplification", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RT-PCR", "SINGLE", "ILLUMINA", "NextSeq 500", null, "SRP257630", null, null, "20170921__14dpf_soc_S6_R1_001.fastq.gz", "fastq", 2318687589.0, 16884467.0, "20170921  14dpf soc S6 R1 001.fastq.gz", "0:137.33 1:0", "A:670856703;C:490885071;G:485692957;T:670107300;N:1145558", 137, 0, null, null, 670856703, 490885071, 485692957, 670107300, 1145558, "SRX8145092", "SRS6507828", "SRA1067479", "Max Planck Institute for Brain Research|Synaptic Plasticity", "Max Planck Institute for Brain Research", 1, 0.94232, null, 0.14969, null, 0.69846, null, 0.50741, null, 136, null, "B", null, "usable mapping rate", "illumina", "nextseq", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "Germany", "2020-04-21", "Multi-stage", "Multi-stage", "Brain", "Nervous System"]], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": ["rowid"], "primary_key_values": ["59026"], "units": {}, "query_ms": 8.338064000099621}