{"database": "metadata", "table": "run_metadata", "rows": [[49740, "SRR8009941", "SRX4840765", "SRS3905926", "SRP165180", "PRJNA495704", "Danio rerio strain:Tubingen Transcriptome or Gene expression", "PRJNA495704", "Other", "Scaffold Matrix Attachment Region 1  SMAR1 is a characterised nuclear matrix binding protein. It is thought to be a mammalian protein that plays role in a various nuclear functions. In the present study  we have identified and characterised SMAR1 homologue in zebrafish zSMAR1 of 2.43 Kb length consisting of 13 exons that encodes a 508 amino acid long protein. zSMAR1 shares 66% homology to mouse SMAR1. Morpholino antisense oligonucleotide MO mediated knock down of zSMAR1 in fish embryos led to embryonic malformations   smaller head size  pericardial edema and a linear heart tube phenotype indicating its role in fish embryogenesis. The present RNA Seq data is generated on Illumina NextSeq 500 platform yielding 75 nucleotide long reads in paired end format. The samples used for sequencing are Control MO injected and MO targeting zSMAR1 injected zebrafish embryos.", null, null, "Scaffold Matrix Attachment Region 1  SMAR1 is a characterised nuclear matrix binding protein. It is thought to be a mammalian protein that plays role in a various nuclear functions. In the present study  we have identified and characterised SMAR1 homologue in zebrafish zSMAR1 of 2.43 Kb length consisting of 13 exons that encodes a 508 amino acid long protein. zSMAR1 shares 66% homology to mouse SMAR1. Morpholino antisense oligonucleotide MO mediated knock down of zSMAR1 in fish embryos led to embryonic malformations   smaller head size  pericardial edema and a linear heart tube phenotype indicating its role in fish embryogenesis. The present RNA Seq data is generated on Illumina NextSeq 500 platform yielding 75 nucleotide long reads in paired end format. 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