{"database": "metadata", "table": "run_metadata", "rows": [[42493, "SRR5681432", "SRX2916757", "SRS2282895", "SRP109143", "PRJNA389374", "Functional role of Eriocalyxin B in zebrafish revealed by transcriptome analysis", "PRJNA389374", "Whole Genome Sequencing", "the first study to comprehensively explore the effects of EriB in zebrafish model using a transcriptome analysis approach.", null, null, null, null, "10um", null, "strain:not applicable|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:not applicable|sex:not determined|tissue:embryos|treatment:10um|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "10um zebrafish", "10um zebrafish", "10um zebrafish", "10um zebrafish", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "unspecified", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "SRP109143", null, null, "10um_1.fq.gz 10um_2.fq.gz", "fastq fastq", 4513300800.0, 22566504.0, "10um 1.fq.gz", "0:100 1:100", "A:1186008993;C:1078123999;G:1056044415;T:1193043558;N:79835", 100, 100, null, null, 1186008993, 1078123999, 1056044415, 1193043558, 79835, "SRX2916757", "SRS2282895", "SRA574072", "The Chinese University of HongKong|School of Biomedical Sciences", "The Chinese University of HongKong", 2, 0.94799, 0.94687, 0.07002, 0.06979, 0.66667, 0.66746, 0.47255, 0.47338, 100, 100, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "unknown", "unknown", "bulk", "unknown", "unknown", null, "China", "2017-06-14", "Undetermined", "Embryo", "Embryo Imprecise", "All anatomical structures"]], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": ["rowid"], "primary_key_values": ["42493"], "units": {}, "query_ms": 8.650795003632084}