{"database": "metadata", "table": "run_metadata", "rows": [[38360, "SRR1791570", "SRX866239", "SRS837299", "SRP053216", "PRJNA274605", "Danio rerio Transcriptome or Gene expression", "PRJNA274605", "Transcriptome Analysis", "Groups of adult zebrafish 9 male and 9 female were exposed for 7 days ttwo xxx ng/L 168.7 pmol/L of 17a ethinylestradiol EE2. Transcriptome response of EE2 in zebrafish liver were analysed.", null, null, "9 female were exposed for 7 days ttwo xxx ng/L 168.7 pmol/L of EE2. Transcriptome response of EE2 in zebrafish liver were analysed.", null, "EE2 exposed Female", null, "breed:zebrafish|age:adult|sex:female|tissue:liver|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "Transcriptome response of EE2 in zebrafish", "EE2 exposed Female", "EE2 exposed Female", "Library Construction: Illumina HiSeq 2000 protolcol.  Experimental design: Adult zebrafish and juvenile crucian carp Carassius auratus were bred and maintained in 10 L glass aquaria operating with a 14:10 h light:dark cycle at 23\u201326\u00b0C in the laboratory. Fish were acclimated for 1 week prior to use and fed with Tubifex worms once per day. Groups of adult zebrafish 9 male and 9 female were exposed for 7 days ttwo xxx ng/L 168.7 pmol/L of 17\u03b1 ethinylestradiol EE2; TCI chemicals  Tokyo  Japan  which had been diluted from a concentrated stock solution solubilized in dimethyl sulfoxide DMSO; Sigma Aldrich  St. Louis  MO  USA. DMSO only was added to the water in control group tanks. Transcriptome response of EE2 in zebrafish liver were analysed.", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "PolyA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>180</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC><READ_SPEC><READ_INDEX>1</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Reverse</READ_TYPE><BASE_COORD>91</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "SRP053216", null, null, "Expose_Female_L1_2.fq.gz Expose_Female_L1_1.fq.gz", "fastq fastq", 4988787300.0, 27715485.0, "EE2 exposed Female", "0:90 1:90", "A:1328523973;C:1152447608;G:1190548781;T:1317135516;N:131422", 90, 90, null, null, 1328523973, 1152447608, 1190548781, 1317135516, 131422, "SRX866239", "SRS837299", "SRA236477", "Yangtze River Fisheries Research Institute|Fisheries resources and environment", "Institute of hydrobiology Chinese academy of sciences", 2, 0.94998, 0.94966, 0.01842, 0.01884, 0.88335, 0.88657, 0.11318, 0.11185, 90, 90, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2016-02-05", "Adult", "Adult", "Liver", "Liver and Biliary System"]], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": ["rowid"], "primary_key_values": ["38360"], "units": {}, "query_ms": 10.412518997327425}