{"database": "metadata", "table": "run_metadata", "rows": [[34482, "SRR31775065", "SRX27136703", "SRS23592222", "SRP552578", "PRJNA1200306", "Efficacy and mechanism of Ganoderma lucidum polysaccharides on zebrafish tail fin regeneration", "PRJNA1200306", "Other", "The polysaccharide of Ganoderma lucidum is the main active ingredient in Ganoderma lucidum  which has antioxidant activity  immune enhancing activity and cell protection. However  for regeneration studies  Ganoderma lucidum polysaccharide mainly focuses on phenotypic changes and corresponding oxidative stress detection and lacks a systematic explanation of the mechanism of action. The purpose of this study was to explore the effect of purified polysaccharide of Ganoderma lucidum GLP 1 on the regeneration of the caudal fin of zebrafish skin.", null, null, null, null, "M3", null, "isolate:m2|breed:zebrafish|age:3 months|collection date:2024 02 29|geo loc name:China:Wuhan|sex:pooled male and female|tissue:tail fin|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of zebrafish tail fin", "M2453369a", "M2453369a", "Comparison of transcriptomic profiles of tail fins between untreated and treated zebrafish.", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "ILLUMINA", "Illumina NovaSeq 6000", null, "SRP552578", null, null, "M3_1.fq.gz M3_2.fq.gz", "fastq fastq", 7846851600.0, 26156172.0, "M3 1.fq.gz", "0:150 1:150", "A:1987433338;C:1933139312;G:1962322370;T:1963945611;N:10969", 150, 150, null, null, 1987433338, 1933139312, 1962322370, 1963945611, 10969, "SRX27136703", "SRS23592222", "SRA2037663", "State Ket Laboratory of Microbial Technology|Shandong University", "State Ket Laboratory of Microbial Technology", null, null, null, null, null, null, null, null, null, null, null, "B", "B", "biological fallback assumption", "illumina", "novaseq_era", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2024-12-19", "Adult", "Adult", "Multi-tissue", "Multi-system"]], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": ["rowid"], "primary_key_values": ["34482"], "units": {}, "query_ms": 11.105839999800082}