{"database": "metadata", "table": "run_metadata", "rows": [[33378, "SRR30168930", "SRX25635540", "SRS22279929", "SRP524879", "PRJNA1145574", "RNA sequencing of tail fin of zebrafish", "PRJNA1145574", "Other", "gene expression change post inhibition of HSP90", null, null, null, "Ax C 3d1", "Z c 3d1", null, "strain:not applicable|isolate:not applicable|breed:not applicable|cultivar:not applicable|ecotype:not applicable|age:3.5 month|collection date:2022 11 20|geo loc name:missing|sex:not determined|tissue:tail fin|treatment:n1 1|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "tail fin regeneration of zebrafish", "Z c 3d1", "Z c 3d1", "cDNA barcode", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RT-PCR", "PAIRED", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP524879", null, null, "Z_C_3d1_R1.fastq Z_C_3d1_R2.fastq", "fastq fastq", 5915874074.0, 19588987.0, "Z C 3d1 R1.fastq", "0:151 1:151", "A:1601403264;C:1350219159;G:1374928971;T:1589252208;N:70472", 151, 151, null, null, 1601403264, 1350219159, 1374928971, 1589252208, 70472, "SRX25635540", "SRS22279929", "SRA1942523", "Ocean University of China|Department of marine biology", "Ocean University of China", 2, 0.92552, 0.92878, 0.07906, 0.07985, 0.70264, 0.70323, 0.48016, 0.48019, 151, 151, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "other", "unknown", "bulk", "unknown", "unknown", null, "China", "2024-08-08", "Adult", "Adult", "Multi-tissue", "Multi-system"]], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": ["rowid"], "primary_key_values": ["33378"], "units": {}, "query_ms": 13.364423008169979}