{"database": "metadata", "table": "run_metadata", "rows": [[32719, "SRR29406603", "SRX24920052", "SRS21625714", "SRP513845", "PRJNA1123436", "Transcriptome analysis of liver tissue of zebrafish", "PRJNA1123436", "Other", "We studied transcriptomic changes in the liver of zebrafish exposed to a certain concentration of tire wear particles.", null, null, "Small particle size was purified for 15 days in the second parallel group", "5 3L", "STSB 3L", null, "isolate:zebrafish|breed:Wild type|age:3 months|collection date:2023 11 11|geo loc name:China:Qingdao|sex:missing|tissue:liver|isolation source:not applicable|lat lon:not collected|replicate:biological replicate 2|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq in Danio rerio: adult liver", "STSB 3L", "STSB 3L", "normal RNA Seq nodules", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "ILLUMINA", "Illumina NovaSeq 6000", null, "SRP513845", null, null, "STSB-3L.R1.fq.gz STSB-3L.R2.fq.gz", "fastq fastq", 6317501400.0, 21058338.0, "STSB 3L.R1.fq.gz", "0:150 1:150", "A:1595686097;C:1528031899;G:1568306906;T:1625221652;N:254846", 150, 150, null, null, 1595686097, 1528031899, 1568306906, 1625221652, 254846, "SRX24920052", "SRS21625714", "SRA1897556", "Qingdao University of Science and technology|College of marine science and biological engineeri", "Qingdao University of Science and technology", 2, 0.92956, 0.93181, 0.03485, 0.03514, 0.79338, 0.79316, 0.48308, 0.48569, 150, 150, "B", "B", "biological fallback assumption", "illumina", "novaseq_era", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2024-06-13", "Adult", "Adult", "Liver", "Liver and Biliary System"]], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": ["rowid"], "primary_key_values": ["32719"], "units": {}, "query_ms": 9.448313001485076}