{"database": "metadata", "table": "run_metadata", "rows": [[32647, "SRR31861968", "SRX27221930", "SRS23670726", "SRP513561", "PRJNA1123309", "Interrogating Disease Gene Function", "PRJNA1123309", "Other", "Genes and genetic variants associated with human disease are continually being discovered  but validating their causative roles and mechanisms remains a significant challenge. CRISPR/Cas9 genome editing in model organisms like zebrafish can enable phenotypic characterization of founder generation F0 knockouts  but these approaches are not amenable to high throughput genetic screening due to high variability  cost  and low phenotype penetrance.", null, null, null, null, "wars1 med11 F0 RNA seq", null, "strain:TAB 5|isolate:WT|age:3dpf|collection date:2024 07 02|geo loc name:USA: Oklahoma City|sex:unknown|tissue:Whole fish|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "wars1 F0 + human WARS1", "G17", "G17", "adapter", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "ILLUMINA", "Illumina NovaSeq X Plus", null, "SRP513561", null, null, "G17_1.fq.gz G17_2.fq.gz", "fastq fastq", 6793816500.0, 22646055.0, "G17 1.fq.gz", "0:150 1:150", "A:1841310854;C:1571063574;G:1568303946;T:1813094152;N:43974", 150, 150, null, null, 1841310854, 1571063574, 1568303946, 1813094152, 43974, "SRX27221930", "SRS23670726", "SRA2043117", "Oklahoma Medical Research Foundation|Genes &amp; Human Disease Research Program", "Oklahoma Medical Research Foundation", null, null, null, null, null, null, null, null, null, null, null, "B", "B", "biological fallback assumption", "illumina", "novaseq_era", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "United States", "2024-12-31", "Larval", "Larval", "Whole Organism", "All anatomical structures"]], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": ["rowid"], "primary_key_values": ["32647"], "units": {}, "query_ms": 8.436636002443265}