{"database": "metadata", "table": "run_metadata", "is_view": false, "human_description_en": "where experiment.platform = \"BGISEQ\", tissue_curation = \"Spleen\" and tissue_curation_coarse = \"Hematopoietic System\"", "rows": [[63070, "SRR13587384", "SRX9982079", "SRS8153594", "SRP303929", "PRJNA698005", "Danio rerio Raw sequence reads", "PRJNA698005", "Whole Genome Sequencing", "Danio rerio Raw RNA sequence reads", null, null, null, "Model organism or animal sample from Danio rerio", "The spleen of Danio rerio", null, "isolate:river|age:adult|sex:not collected|tissue:spleen|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "9ZS", "9ZS", "9ZS", "The spleen experiment repeat 3 of Gobiocypris rarus", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP303929", null, null, "9ZS_1.fq.gz 9ZS_2.fq.gz", "fastq fastq", 8205802500.0, 54705350.0, "9ZS 1.fq.gz", "0:150 1:150", "A:2280163497;C:1814966062;G:1803870112;T:2306802829;N:0", 150, 150, null, null, 2280163497, 1814966062, 1803870112, 2306802829, 0, "SRX9982079", "SRS8153594", "SRA1189624", "Center for Ecological and Environmental Sciences|Northwestern Polytechnical University", "Center for Ecological and Environmental Sciences", 1, 0.90674, null, 0.10519, null, 0.73225, null, 0.50894, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-01-30", "Adult", "Adult", "Spleen", "Hematopoietic System"], [63071, "SRR13587385", "SRX9982078", "SRS8153594", "SRP303929", "PRJNA698005", "Danio rerio Raw sequence reads", "PRJNA698005", "Whole Genome Sequencing", "Danio rerio Raw RNA sequence reads", null, null, null, "Model organism or animal sample from Danio rerio", "The spleen of Danio rerio", null, "isolate:river|age:adult|sex:not collected|tissue:spleen|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "24ZS", "24ZS", "24ZS", "The spleen control repeat 3 of Gobiocypris rarus", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP303929", null, null, "24ZS_1.fq.gz 24ZS_2.fq.gz", "fastq fastq", 8279731500.0, 55198210.0, "24ZS 1.fq.gz", "0:150 1:150", "A:2228188611;C:1909382391;G:1884421138;T:2257483634;N:255726", 150, 150, null, null, 2228188611, 1909382391, 1884421138, 2257483634, 255726, "SRX9982078", "SRS8153594", "SRA1189624", "Center for Ecological and Environmental Sciences|Northwestern Polytechnical University", "Center for Ecological and Environmental Sciences", 1, 0.91852, null, 0.09459, null, 0.74539, null, 0.51194, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-01-30", "Adult", "Adult", "Spleen", "Hematopoietic System"], [63072, "SRR13587386", "SRX9982077", "SRS8153594", "SRP303929", "PRJNA698005", "Danio rerio Raw sequence reads", "PRJNA698005", "Whole Genome Sequencing", "Danio rerio Raw RNA sequence reads", null, null, null, "Model organism or animal sample from Danio rerio", "The spleen of Danio rerio", null, "isolate:river|age:adult|sex:not collected|tissue:spleen|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "8ZS", "8ZS", "8ZS", "The spleen experiment repeat 2 of Gobiocypris rarus", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP303929", null, null, "8ZS_1.fq.gz 8ZS_2.fq.gz", "fastq fastq", 8376961800.0, 55846412.0, "8ZS 1.fq.gz", "0:150 1:150", "A:2362175703;C:1822140642;G:1805332183;T:2386668646;N:644626", 150, 150, null, null, 2362175703, 1822140642, 1805332183, 2386668646, 644626, "SRX9982077", "SRS8153594", "SRA1189624", "Center for Ecological and Environmental Sciences|Northwestern Polytechnical University", "Center for Ecological and Environmental Sciences", 1, 0.89088, null, 0.11828, null, 0.74138, null, 0.51485, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-01-30", "Adult", "Adult", "Spleen", "Hematopoietic System"], [63073, "SRR13587387", "SRX9982076", "SRS8153594", "SRP303929", "PRJNA698005", "Danio rerio Raw sequence reads", "PRJNA698005", "Whole Genome Sequencing", "Danio rerio Raw RNA sequence reads", null, null, null, "Model organism or animal sample from Danio rerio", "The spleen of Danio rerio", null, "isolate:river|age:adult|sex:not collected|tissue:spleen|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "19Z S", "19Z S", "19Z S", "The spleen control repeat 2 of Gobiocypris rarus", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP303929", null, null, "19Z_S_1.fq.gz 19Z_S_2.fq.gz", "fastq fastq", 8390649600.0, 55937664.0, "19Z S 1.fq.gz", "0:150 1:150", "A:2302584143;C:1877946699;G:1869505731;T:2340091695;N:521332", 150, 150, null, null, 2302584143, 1877946699, 1869505731, 2340091695, 521332, "SRX9982076", "SRS8153594", "SRA1189624", "Center for Ecological and Environmental Sciences|Northwestern Polytechnical University", "Center for Ecological and Environmental Sciences", 1, 0.89383, null, 0.11774, null, 0.73359, null, 0.4805, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-01-30", "Adult", "Adult", "Spleen", "Hematopoietic System"], [63074, "SRR13587388", "SRX9982075", "SRS8153594", "SRP303929", "PRJNA698005", "Danio rerio Raw sequence reads", "PRJNA698005", "Whole Genome Sequencing", "Danio rerio Raw RNA sequence reads", null, null, null, "Model organism or animal sample from Danio rerio", "The spleen of Danio rerio", null, "isolate:river|age:adult|sex:not collected|tissue:spleen|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "10ZS", "10ZS", "10ZS", "The spleen experiment repeat 1 of Gobiocypris rarus", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP303929", null, null, "10ZS_1.fq.gz 10ZS_2.fq.gz", "fastq fastq", 8391962700.0, 55946418.0, "10ZS 1.fq.gz", "0:150 1:150", "A:2326501009;C:1860778012;G:1850272162;T:2354411517;N:0", 150, 150, null, null, 2326501009, 1860778012, 1850272162, 2354411517, 0, "SRX9982075", "SRS8153594", "SRA1189624", "Center for Ecological and Environmental Sciences|Northwestern Polytechnical University", "Center for Ecological and Environmental Sciences", 1, 0.907, null, 0.10692, null, 0.72809, null, 0.50685, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-01-30", "Adult", "Adult", "Spleen", "Hematopoietic System"], [63075, "SRR13587389", "SRX9982074", "SRS8153594", "SRP303929", "PRJNA698005", "Danio rerio Raw sequence reads", "PRJNA698005", "Whole Genome Sequencing", "Danio rerio Raw RNA sequence reads", null, null, null, "Model organism or animal sample from Danio rerio", "The spleen of Danio rerio", null, "isolate:river|age:adult|sex:not collected|tissue:spleen|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "10Z S", "10Z S", "10Z S", "The spleen control repeat 1 of Gobiocypris rarus", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP303929", null, null, "10Z_S_1.fq.gz 10Z_S_2.fq.gz", "fastq fastq", 8375904900.0, 55839366.0, "10Z S 1.fq.gz", "0:150 1:150", "A:2357505118;C:1814876503;G:1806400464;T:2396638627;N:484188", 150, 150, null, null, 2357505118, 1814876503, 1806400464, 2396638627, 484188, "SRX9982074", "SRS8153594", "SRA1189624", "Center for Ecological and Environmental Sciences|Northwestern Polytechnical University", "Center for Ecological and Environmental Sciences", 1, 0.89619, null, 0.12161, null, 0.73878, null, 0.52421, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-01-30", "Adult", "Adult", "Spleen", "Hematopoietic System"]], "truncated": false, "filtered_table_rows_count": 6, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [run.accession], [experiment.accession], [sample.accession], [study.accession], bioproject, [study.title], [study.alias], [study.type], [study.abstract], [study.attributes], [study.PMIDs], [sample.description], [sample.title], [sample.alias], [sample.centername], [sample.attributes], [GEOsample.title], [GEOsample.dataprocessing], [GEOsample.source], [GEOsample.treatmentprotocol], [GEOsample.extractprotocol], [GEOsample.growthprotocol], [GEOsample.characteristics], [GEOsample.accession], [experiment.title], [experiment.alias], [experiment.library_name], [experiment.design_description], [experiment.library_construction_protocol], [experiment.attributes], [experiment.library_strategy], [experiment.library_source], [experiment.library_selection], [experiment.library_layout], [experiment.platform], [experiment.instrument_model], [experiment.spot_descriptor], [experiment.study_ref], [run.title], [run.attributes], [run.filename], [run.semantic_name], [run.total_bases], [run.total_spots], [run.alias], [run.read_lengths], [run.base_counts], [run.r1_length], [run.r2_length], [run.r3_length], [run.r4_length], [run.Acount], [run.Ccount], [run.Gcount], [run.Tcount], [run.Ncount], [run.experiment], [run.pool_member], [submission.accession], [submission.srasource], [submission.bioprojectsource], [seqdetective.n_mates], [seqdetective.mapping_rate.mate1], [seqdetective.mapping_rate.mate2], [seqdetective.nofeature_rate.mate1], [seqdetective.nofeature_rate.mate2], [seqdetective.sparsity.mate1], [seqdetective.sparsity.mate2], [seqdetective.pos_strand_rate.mate1], [seqdetective.pos_strand_rate.mate2], [seqdetective.readlen.mate1], [seqdetective.readlen.mate2], [seqdetective.judgement.mate1], [seqdetective.judgement.mate2], [seqdetective.judgement.reason], platform_family, instrument_generation, read_bias, selection_class, prep_kit, sc_or_bulk, tech_class, technology, tech_variant, [submission.bioprojectsource.country], earliest_date, devstage_curation, devstage_curation_coarse, tissue_curation, tissue_curation_coarse from run_metadata where \"experiment.platform\" = :p0 and \"tissue_curation\" = :p1 and \"tissue_curation_coarse\" = :p2 order by rowid limit 101", "params": {"p0": "BGISEQ", "p1": "Spleen", "p2": "Hematopoietic System"}}, "facet_results": {"experiment.library_strategy": {"name": "experiment.library_strategy", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "RNA-Seq", "label": "RNA-Seq", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System&experiment.library_strategy=RNA-Seq", "selected": false}], "truncated": false}, "experiment.library_source": {"name": "experiment.library_source", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "TRANSCRIPTOMIC", "label": "TRANSCRIPTOMIC", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System&experiment.library_source=TRANSCRIPTOMIC", "selected": false}], "truncated": false}, "experiment.library_selection": {"name": "experiment.library_selection", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "RANDOM", "label": "RANDOM", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System&experiment.library_selection=RANDOM", "selected": false}], "truncated": false}, "experiment.library_layout": {"name": "experiment.library_layout", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "PAIRED", "label": "PAIRED", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System&experiment.library_layout=PAIRED", "selected": false}], "truncated": false}, "experiment.platform": {"name": "experiment.platform", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "BGISEQ", "label": "BGISEQ", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "selected": true}], "truncated": false}, "devstage_curation_coarse": {"name": "devstage_curation_coarse", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "Adult", "label": "Adult", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System&devstage_curation_coarse=Adult", "selected": false}], "truncated": false}, "devstage_curation": {"name": "devstage_curation", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "Adult", "label": "Adult", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System&devstage_curation=Adult", "selected": false}], "truncated": false}, "tissue_curation_coarse": {"name": "tissue_curation_coarse", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "Hematopoietic System", "label": "Hematopoietic System", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen", "selected": true}], "truncated": false}, "tissue_curation": {"name": "tissue_curation", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "Spleen", "label": "Spleen", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation_coarse=Hematopoietic+System", "selected": true}], "truncated": false}, "technology": {"name": "technology", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System", "results": [{"value": "unknown", "label": "unknown", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Spleen&tissue_curation_coarse=Hematopoietic+System&technology=unknown", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 104.22794699843507}