{"database": "metadata", "table": "run_metadata", "is_view": false, "human_description_en": "where experiment.library_selection = \"Oligo-dT\", experiment.platform = \"BGISEQ\" and tissue_curation = \"Brain\"", "rows": [[65944, "SRR15700565", "SRX11996477", "SRS10003992", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 21 DAY RECOVERY", null, "R01", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 1|treatment:control|SAMPLING TIME:END OF 21 DAY RECOVERY|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "R01", "R01", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "R01_1.fq.gz R01_2.fq.gz", "fastq fastq", 6781182900.0, 45207886.0, "R01 1.fq.gz", "0:150 1:150", "A:1988991157;C:1393829563;G:1402027963;T:1996312981;N:21236", 150, 150, null, null, 1988991157, 1393829563, 1402027963, 1996312981, 21236, "SRX11996477", "SRS10003992", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91278, null, 0.20165, null, 0.71054, null, 0.54354, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65945, "SRR15700566", "SRX11996476", "SRS10003991", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 7 DAY EXPOSURE", null, "EH3", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 3|treatment:AMI 40.0|SAMPLING TIME:END OF 7 DAY EXPOSURE|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "EH3", "EH3", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "EH3_1.fq.gz EH3_2.fq.gz", "fastq fastq", 6798939900.0, 45326266.0, "EH3 1.fq.gz", "0:150 1:150", "A:1958992563;C:1429773625;G:1441958341;T:1968192397;N:22974", 150, 150, null, null, 1958992563, 1429773625, 1441958341, 1968192397, 22974, "SRX11996476", "SRS10003991", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91681, null, 0.18245, null, 0.7083, null, 0.5369, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65946, "SRR15700567", "SRX11996475", "SRS10003990", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 7 DAY EXPOSURE", null, "EH2", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 2|treatment:AMI 40.0|SAMPLING TIME:END OF 7 DAY EXPOSURE|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "EH2", "EH2", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "EH2_1.fq.gz EH2_2.fq.gz", "fastq fastq", 6792825900.0, 45285506.0, "EH2 1.fq.gz", "0:150 1:150", "A:1958355652;C:1427389031;G:1440081079;T:1966978334;N:21804", 150, 150, null, null, 1958355652, 1427389031, 1440081079, 1966978334, 21804, "SRX11996475", "SRS10003990", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91907, null, 0.17888, null, 0.70575, null, 0.54118, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65947, "SRR15700568", "SRX11996474", "SRS10003989", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 7 DAY EXPOSURE", null, "EH1", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 1|treatment:AMI 40.0|SAMPLING TIME:END OF 7 DAY EXPOSURE|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "EH1", "EH1", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "EH1_1.fq.gz EH1_2.fq.gz", "fastq fastq", 6723154200.0, 44821028.0, "EH1 1.fq.gz", "0:150 1:150", "A:1939940725;C:1412087358;G:1424339686;T:1946764075;N:22356", 150, 150, null, null, 1939940725, 1412087358, 1424339686, 1946764075, 22356, "SRX11996474", "SRS10003989", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91848, null, 0.1756, null, 0.71293, null, 0.54795, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65948, "SRR15700569", "SRX11996473", "SRS10003988", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 7 DAY EXPOSURE", null, "EL3", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 3|treatment:AMI 2.5|SAMPLING TIME:END OF 7 DAY EXPOSURE|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "EL3", "EL3", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "EL3_1.fq.gz EL3_2.fq.gz", "fastq fastq", 6756746700.0, 45044978.0, "EL3 1.fq.gz", "0:150 1:150", "A:1958754520;C:1411572406;G:1418753117;T:1967647023;N:19634", 150, 150, null, null, 1958754520, 1411572406, 1418753117, 1967647023, 19634, "SRX11996473", "SRS10003988", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91873, null, 0.18319, null, 0.71027, null, 0.55277, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65949, "SRR15700570", "SRX11996472", "SRS10003987", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 7 DAY EXPOSURE", null, "EL2", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 2|treatment:AMI 2.5|SAMPLING TIME:END OF 7 DAY EXPOSURE|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "EL2", "EL2", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "EL2_1.fq.gz EL2_2.fq.gz", "fastq fastq", 6811200600.0, 45408004.0, "EL2 1.fq.gz", "0:150 1:150", "A:1961542081;C:1433135536;G:1446857456;T:1969644200;N:21327", 150, 150, null, null, 1961542081, 1433135536, 1446857456, 1969644200, 21327, "SRX11996472", "SRS10003987", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91853, null, 0.17639, null, 0.71076, null, 0.54175, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65950, "SRR15700571", "SRX11996471", "SRS10003986", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 7 DAY EXPOSURE", null, "EL1", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 1|treatment:AMI 2.5|SAMPLING TIME:END OF 7 DAY EXPOSURE|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "EL1", "EL1", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "EL1_1.fq.gz EL1_2.fq.gz", "fastq fastq", 6764302200.0, 45095348.0, "EL1 1.fq.gz", "0:150 1:150", "A:1943560425;C:1428175041;G:1441358638;T:1951185256;N:22840", 150, 150, null, null, 1943560425, 1428175041, 1441358638, 1951185256, 22840, "SRX11996471", "SRS10003986", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91885, null, 0.17456, null, 0.71423, null, 0.53356, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65951, "SRR15700572", "SRX11996470", "SRS10003985", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 7 DAY EXPOSURE", null, "E03", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 3|treatment:control|SAMPLING TIME:END OF 7 DAY EXPOSURE|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "E03", "E03", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "E03_1.fq.gz E03_2.fq.gz", "fastq fastq", 6762334500.0, 45082230.0, "E03 1.fq.gz", "0:150 1:150", "A:1941432663;C:1429093210;G:1444693949;T:1947091388;N:23290", 150, 150, null, null, 1941432663, 1429093210, 1444693949, 1947091388, 23290, "SRX11996470", "SRS10003985", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91902, null, 0.17577, null, 0.71413, null, 0.54672, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65952, "SRR15700573", "SRX11996469", "SRS10003984", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 21 DAY RECOVERY", null, "RH3", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 3|treatment:AMI 40.0|SAMPLING TIME:END OF 21 DAY RECOVERY|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "RH3", "RH3", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "RH3_1.fq.gz RH3_2.fq.gz", "fastq fastq", 6620159400.0, 44134396.0, "RH3 1.fq.gz", "0:150 1:150", "A:1906961918;C:1396128146;G:1402603611;T:1914452217;N:13508", 150, 150, null, null, 1906961918, 1396128146, 1402603611, 1914452217, 13508, "SRX11996469", "SRS10003984", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91596, null, 0.18007, null, 0.70307, null, 0.53072, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65953, "SRR15700574", "SRX11996468", "SRS10003983", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 21 DAY RECOVERY", null, "RH2", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 2|treatment:AMI 40.0|SAMPLING TIME:END OF 21 DAY RECOVERY|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "RH2", "RH2", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "RH2_1.fq.gz RH2_2.fq.gz", "fastq fastq", 6779957400.0, 45199716.0, "RH2 1.fq.gz", "0:150 1:150", "A:1943750299;C:1436936087;G:1447253724;T:1952003667;N:13623", 150, 150, null, null, 1943750299, 1436936087, 1447253724, 1952003667, 13623, "SRX11996468", "SRS10003983", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91806, null, 0.17416, null, 0.70364, null, 0.53449, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65954, "SRR15700575", "SRX11996467", "SRS10003982", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 21 DAY RECOVERY", null, "RH1", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 1|treatment:AMI 40.0|SAMPLING TIME:END OF 21 DAY RECOVERY|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "RH1", "RH1", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "RH1_1.fq.gz RH1_2.fq.gz", "fastq fastq", 6803711400.0, 45358076.0, "RH1 1.fq.gz", "0:150 1:150", "A:1919109429;C:1472916047;G:1485344758;T:1926327627;N:13539", 150, 150, null, null, 1919109429, 1472916047, 1485344758, 1926327627, 13539, "SRX11996467", "SRS10003982", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.92595, null, 0.14064, null, 0.71392, null, 0.5508, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65955, "SRR15700576", "SRX11996466", "SRS10003981", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 21 DAY RECOVERY", null, "RL3", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 3|treatment:AMI 2.5|SAMPLING TIME:END OF 21 DAY RECOVERY|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "RL3", "RL3", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "RL3_1.fq.gz RL3_2.fq.gz", "fastq fastq", 6775779300.0, 45171862.0, "RL3 1.fq.gz", "0:150 1:150", "A:1977555439;C:1404514814;G:1412262159;T:1981432811;N:14077", 150, 150, null, null, 1977555439, 1404514814, 1412262159, 1981432811, 14077, "SRX11996466", "SRS10003981", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91883, null, 0.1833, null, 0.71638, null, 0.55343, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65956, "SRR15700577", "SRX11996465", "SRS10003979", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 21 DAY RECOVERY", null, "RL2", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 2|treatment:AMI 2.5|SAMPLING TIME:END OF 21 DAY RECOVERY|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "RL2", "RL2", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "RL2_1.fq.gz RL2_2.fq.gz", "fastq fastq", 6716301900.0, 44775346.0, "RL2 1.fq.gz", "0:150 1:150", "A:1959165761;C:1392977724;G:1400724963;T:1963418595;N:14857", 150, 150, null, null, 1959165761, 1392977724, 1400724963, 1963418595, 14857, "SRX11996465", "SRS10003979", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.92114, null, 0.18164, null, 0.7217, null, 0.55665, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65957, "SRR15700578", "SRX11996464", "SRS10003980", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 21 DAY RECOVERY", null, "RL1", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 1|treatment:AMI 2.5|SAMPLING TIME:END OF 21 DAY RECOVERY|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "RL1", "RL1", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "RL1_1.fq.gz RL1_2.fq.gz", "fastq fastq", 6632905200.0, 44219368.0, "RL1 1.fq.gz", "0:150 1:150", "A:1930258593;C:1379056686;G:1391344096;T:1932223405;N:22420", 150, 150, null, null, 1930258593, 1379056686, 1391344096, 1932223405, 22420, "SRX11996464", "SRS10003980", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91966, null, 0.18087, null, 0.72121, null, 0.5664, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65958, "SRR15700579", "SRX11996463", "SRS10003978", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 21 DAY RECOVERY", null, "R03", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 3|treatment:control|SAMPLING TIME:END OF 21 DAY RECOVERY|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "R03", "R03", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "R03_1.fq.gz R03_2.fq.gz", "fastq fastq", 6574600200.0, 43830668.0, "R03 1.fq.gz", "0:150 1:150", "A:1940343461;C:1342685356;G:1350150434;T:1941399481;N:21468", 150, 150, null, null, 1940343461, 1342685356, 1350150434, 1941399481, 21468, "SRX11996463", "SRS10003978", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91867, null, 0.19479, null, 0.72707, null, 0.57885, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65959, "SRR15700580", "SRX11996462", "SRS10003977", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 21 DAY RECOVERY", null, "R02", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 2|treatment:control|SAMPLING TIME:END OF 21 DAY RECOVERY|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "R02", "R02", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "R02_1.fq.gz R02_2.fq.gz", "fastq fastq", 6399007800.0, 42660052.0, "R02 1.fq.gz", "0:150 1:150", "A:1884110766;C:1308008993;G:1315054545;T:1891764364;N:69132", 150, 150, null, null, 1884110766, 1308008993, 1315054545, 1891764364, 69132, "SRX11996462", "SRS10003977", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91477, null, 0.19859, null, 0.72417, null, 0.55394, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65960, "SRR15700581", "SRX11996461", "SRS10003976", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 7 DAY EXPOSURE", null, "E02", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 2|treatment:control|SAMPLING TIME:END OF 7 DAY EXPOSURE|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "E02", "E02", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "E02_1.fq.gz E02_2.fq.gz", "fastq fastq", 6588207000.0, 43921380.0, "E02 1.fq.gz", "0:150 1:150", "A:1905685715;C:1379753621;G:1389708827;T:1913038146;N:20691", 150, 150, null, null, 1905685715, 1379753621, 1389708827, 1913038146, 20691, "SRX11996461", "SRS10003976", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91596, null, 0.18027, null, 0.70903, null, 0.54349, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"], [65961, "SRR15700582", "SRX11996460", "SRS10003975", "SRP335395", "PRJNA759881", "Persistent Impact of Short term Amitriptyline Exposure on brain Transcriptional Profile of Zebrafish Danio rerio", "PRJNA759881", "Other", "Following exposure to Amitriptyline AMI for 7 days E7  zebrafish were transferred into AMI free water to recover for 21 days R21. Brain transcriptional profiles were investigated on E7 and R21.", null, null, "END OF 7 DAY EXPOSURE", null, "E01", null, "strain:AB|age:4 MONTHS|dev stage:Adult|sex:female|tissue:brain|replicate:replicate = biological replicate 1|treatment:control|SAMPLING TIME:END OF 7 DAY EXPOSURE|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA Seq of Danio rerio: adult female brain", "E01", "E01", "a standardized procedure at the Beijing Genome Institute", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "Oligo-dT", "PAIRED", "BGISEQ", "BGISEQ-500", null, "SRP335395", null, null, "E01_1.fq.gz E01_2.fq.gz", "fastq fastq", 6766213800.0, 45108092.0, "E01 1.fq.gz", "0:150 1:150", "A:1963125745;C:1410900205;G:1420069949;T:1972096961;N:20940", 150, 150, null, null, 1963125745, 1410900205, 1420069949, 1972096961, 20940, "SRX11996460", "SRS10003975", "SRA1288076", "Jiangsu University|Institute of Environmental Health and Ecological S", "Jiangsu University", 1, 0.91884, null, 0.18555, null, 0.71585, null, 0.5455, null, 150, null, "B", null, "usable mapping rate", "bgi", "bgi", "unknown", "poly_a", "unknown", "bulk", "unknown", "unknown", null, "China", "2021-09-02", "Adult", "Adult", "Brain", "Nervous System"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "run.accession", "experiment.accession", "sample.accession", "study.accession", "bioproject", "study.title", "study.alias", "study.type", "study.abstract", "study.attributes", "study.PMIDs", "sample.description", "sample.title", "sample.alias", "sample.centername", "sample.attributes", "GEOsample.title", "GEOsample.dataprocessing", "GEOsample.source", "GEOsample.treatmentprotocol", "GEOsample.extractprotocol", "GEOsample.growthprotocol", "GEOsample.characteristics", "GEOsample.accession", "experiment.title", "experiment.alias", "experiment.library_name", "experiment.design_description", "experiment.library_construction_protocol", "experiment.attributes", "experiment.library_strategy", "experiment.library_source", "experiment.library_selection", "experiment.library_layout", "experiment.platform", "experiment.instrument_model", "experiment.spot_descriptor", "experiment.study_ref", "run.title", "run.attributes", "run.filename", "run.semantic_name", "run.total_bases", "run.total_spots", "run.alias", "run.read_lengths", "run.base_counts", "run.r1_length", "run.r2_length", "run.r3_length", "run.r4_length", "run.Acount", "run.Ccount", "run.Gcount", "run.Tcount", "run.Ncount", "run.experiment", "run.pool_member", "submission.accession", "submission.srasource", "submission.bioprojectsource", "seqdetective.n_mates", "seqdetective.mapping_rate.mate1", "seqdetective.mapping_rate.mate2", "seqdetective.nofeature_rate.mate1", "seqdetective.nofeature_rate.mate2", "seqdetective.sparsity.mate1", "seqdetective.sparsity.mate2", "seqdetective.pos_strand_rate.mate1", "seqdetective.pos_strand_rate.mate2", "seqdetective.readlen.mate1", "seqdetective.readlen.mate2", "seqdetective.judgement.mate1", "seqdetective.judgement.mate2", "seqdetective.judgement.reason", "platform_family", "instrument_generation", "read_bias", "selection_class", "prep_kit", "sc_or_bulk", "tech_class", "technology", "tech_variant", "submission.bioprojectsource.country", "earliest_date", "devstage_curation", "devstage_curation_coarse", "tissue_curation", "tissue_curation_coarse"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [run.accession], [experiment.accession], [sample.accession], [study.accession], bioproject, [study.title], [study.alias], [study.type], [study.abstract], [study.attributes], [study.PMIDs], [sample.description], [sample.title], [sample.alias], [sample.centername], [sample.attributes], [GEOsample.title], [GEOsample.dataprocessing], [GEOsample.source], [GEOsample.treatmentprotocol], [GEOsample.extractprotocol], [GEOsample.growthprotocol], [GEOsample.characteristics], [GEOsample.accession], [experiment.title], [experiment.alias], [experiment.library_name], [experiment.design_description], [experiment.library_construction_protocol], [experiment.attributes], [experiment.library_strategy], [experiment.library_source], [experiment.library_selection], [experiment.library_layout], [experiment.platform], [experiment.instrument_model], [experiment.spot_descriptor], [experiment.study_ref], [run.title], [run.attributes], [run.filename], [run.semantic_name], [run.total_bases], [run.total_spots], [run.alias], [run.read_lengths], [run.base_counts], [run.r1_length], [run.r2_length], [run.r3_length], [run.r4_length], [run.Acount], [run.Ccount], [run.Gcount], [run.Tcount], [run.Ncount], [run.experiment], [run.pool_member], [submission.accession], [submission.srasource], [submission.bioprojectsource], [seqdetective.n_mates], [seqdetective.mapping_rate.mate1], [seqdetective.mapping_rate.mate2], [seqdetective.nofeature_rate.mate1], [seqdetective.nofeature_rate.mate2], [seqdetective.sparsity.mate1], [seqdetective.sparsity.mate2], [seqdetective.pos_strand_rate.mate1], [seqdetective.pos_strand_rate.mate2], [seqdetective.readlen.mate1], [seqdetective.readlen.mate2], [seqdetective.judgement.mate1], [seqdetective.judgement.mate2], [seqdetective.judgement.reason], platform_family, instrument_generation, read_bias, selection_class, prep_kit, sc_or_bulk, tech_class, technology, tech_variant, [submission.bioprojectsource.country], earliest_date, devstage_curation, devstage_curation_coarse, tissue_curation, tissue_curation_coarse from run_metadata where \"experiment.library_selection\" = :p0 and \"experiment.platform\" = :p1 and \"tissue_curation\" = :p2 order by rowid limit 101", "params": {"p0": "Oligo-dT", "p1": "BGISEQ", "p2": "Brain"}}, "facet_results": {"experiment.library_strategy": {"name": "experiment.library_strategy", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "RNA-Seq", "label": "RNA-Seq", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain&experiment.library_strategy=RNA-Seq", "selected": false}], "truncated": false}, "experiment.library_source": {"name": "experiment.library_source", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "TRANSCRIPTOMIC", "label": "TRANSCRIPTOMIC", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain&experiment.library_source=TRANSCRIPTOMIC", "selected": false}], "truncated": false}, "experiment.library_selection": {"name": "experiment.library_selection", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "Oligo-dT", "label": "Oligo-dT", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.platform=BGISEQ&tissue_curation=Brain", "selected": true}], "truncated": false}, "experiment.library_layout": {"name": "experiment.library_layout", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "PAIRED", "label": "PAIRED", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain&experiment.library_layout=PAIRED", "selected": false}], "truncated": false}, "experiment.platform": {"name": "experiment.platform", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "BGISEQ", "label": "BGISEQ", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&tissue_curation=Brain", "selected": true}], "truncated": false}, "devstage_curation_coarse": {"name": "devstage_curation_coarse", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "Adult", "label": "Adult", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain&devstage_curation_coarse=Adult", "selected": false}], "truncated": false}, "devstage_curation": {"name": "devstage_curation", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "Adult", "label": "Adult", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain&devstage_curation=Adult", "selected": false}], "truncated": false}, "tissue_curation_coarse": {"name": "tissue_curation_coarse", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "Nervous System", "label": "Nervous System", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain&tissue_curation_coarse=Nervous+System", "selected": false}], "truncated": false}, "tissue_curation": {"name": "tissue_curation", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "Brain", "label": "Brain", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ", "selected": true}], "truncated": false}, "technology": {"name": "technology", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain", "results": [{"value": "unknown", "label": "unknown", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=Oligo-dT&experiment.platform=BGISEQ&tissue_curation=Brain&technology=unknown", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 64.73591299436521}