{"database": "metadata", "table": "run_metadata", "is_view": false, "human_description_en": "where experiment.library_layout = \"SINGLE\", experiment.library_selection = \"RANDOM\" and tissue_curation = \"Whole Organism\"", "rows": [[9825, "ERR2102841", "ERX2160152", "ERS1883528", "ERP040145", "PRJEB37796", "Rna seq of control and 2mM NaBu treated zebrafish larvae 8 dpf", "E-MTAB-5992", "Transcriptome Analysis", "We wanted to compare gene expression from control untreated zebrafish larvae and 2 mM NaBu treated larvae for 24 hours  in order to assess the effect of inhibition of the HDAC pathway in these animals", "ENA FIRST PUBLIC:2017 08 29|ENA LAST UPDATE:2017 08 23|ArrayExpress:E MTAB 5992", null, "Protocols: zebrafish were isolated during pharyngula stage  daily fed and water changed until 8 dpf 2 mM NaBu for 24 hours in some samples Whole larvae where immersed in RNA later  and RNA was extracted using a Qiagen kit following manufacturer recommendations. 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We also map clean reads to reference genome  on average 71.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP117794", null, null, "FCHCKWTBBXX-WHZEBleaEAACRAAPEI-20_L1_1.fq.gz FCHCKWTBBXX-WHZEBleaEAACRAAPEI-20_L1_2.fq.gz", "fastq fastq", 6648275100.0, 22160917.0, "FCHCKWTBBXX WHZEBleaEAACRAAPEI 20 L1 2.fq.gz", "0:150 1:150", "A:1742296604;C:1590637599;G:1588423459;T:1726207133;N:710305", 150, 150, null, null, 1742296604, 1590637599, 1588423459, 1726207133, 710305, "SRX3194198", "SRS2520599", "SRA608833", "Fudan University|Department of Biochemistry and Molecular Biology,", "Fudan University", 2, 0.91275, 0.9117, 0.06243, 0.06238, 0.6743, 0.68002, 0.48294, 0.4832, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2017-09-17", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [43750, "SRR6047140", "SRX3194197", "SRS2520598", "SRP117794", "PRJNA407650", "Danio rerio Transcriptome or Gene expression", "PRJNA407650", "Transcriptome Analysis", "We performed RNA sequencing on four groups of zebrafish larvae: control  TgMyc  TgKras  TgMyc&TgKras to analyze the expression of genes involved in the lipid associated pathways.The results revealed high dynamic alterations in almost all aspects of lipid metabolism  among which  the expressions of genes involved in TG/DG/GP transformation and FA desaturation/elongation displayed intensive changes  in consistent with our observations in lipodomics profiling", null, null, null, null, "Myc", null, "strain:Tgfabp10a:TetON; TRE:Myc|breed:breed with AB|cultivar:not applicable|ecotype:not applicable|age:6dpf|dev stage:larval|sex:not determined|tissue:whole larvae|treatment:E3 with Doxcyclin41ug/ml|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of zebrafish larvaeMyc at 6dpf", "Myc", "Myc", "In our project  we sequence 4 samples use Illumina Hiseq platform  and on average we generated about 6.56Gb bases from each sample. We also map clean reads to reference genome  on average 71.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP117794", null, null, "FCHCKWTBBXX-WHZEBleaEAABRAAPEI-19_L1_1.fq.gz FCHCKWTBBXX-WHZEBleaEAABRAAPEI-19_L1_2.fq.gz", "fastq fastq", 6562440900.0, 21874803.0, "FCHCKWTBBXX WHZEBleaEAABRAAPEI 19 L1 2.fq.gz", "0:150 1:150", "A:1690373636;C:1597720217;G:1597100889;T:1676557094;N:689064", 150, 150, null, null, 1690373636, 1597720217, 1597100889, 1676557094, 689064, "SRX3194197", "SRS2520598", "SRA608833", "Fudan University|Department of Biochemistry and Molecular Biology,", "Fudan University", 2, 0.9112, 0.9098, 0.05364, 0.05314, 0.68199, 0.68826, 0.47506, 0.48785, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2017-09-17", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [43751, "SRR6047141", "SRX3194196", "SRS2520597", "SRP117794", "PRJNA407650", "Danio rerio Transcriptome or Gene expression", "PRJNA407650", "Transcriptome Analysis", "We performed RNA sequencing on four groups of zebrafish larvae: control  TgMyc  TgKras  TgMyc&TgKras to analyze the expression of genes involved in the lipid associated pathways.The results revealed high dynamic alterations in almost all aspects of lipid metabolism  among which  the expressions of genes involved in TG/DG/GP transformation and FA desaturation/elongation displayed intensive changes  in consistent with our observations in lipodomics profiling", null, null, null, null, "Kras", null, "strain:Tgfabp10a:TetON; TRE:eGFP krasv12|breed:breed with AB|cultivar:not applicable|ecotype:not applicable|age:6dpf|dev stage:larval|sex:not determined|tissue:whole larvae|treatment:E3 with Doxcyclin42ug/ml|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of zebrafish larvaeKras at 6dpf", "Kras", "Kras", "In our project  we sequence 4 samples use Illumina Hiseq platform  and on average we generated about 6.56Gb bases from each sample. We also map clean reads to reference genome  on average 71.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP117794", null, null, "FCHCKWTBBXX-WHZEBleaEAADRAAPEI-21_L1_1.fq.gz FCHCKWTBBXX-WHZEBleaEAADRAAPEI-21_L1_2.fq.gz", "fastq fastq", 6567871200.0, 21892904.0, "FCHCKWTBBXX WHZEBleaEAADRAAPEI 21 L1 2.fq.gz", "0:150 1:150", "A:1728249052;C:1564137653;G:1559231198;T:1715565790;N:687507", 150, 150, null, null, 1728249052, 1564137653, 1559231198, 1715565790, 687507, "SRX3194196", "SRS2520597", "SRA608833", "Fudan University|Department of Biochemistry and Molecular Biology,", "Fudan University", 2, 0.93087, 0.92811, 0.06342, 0.06328, 0.66941, 0.67493, 0.47581, 0.47601, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2017-09-17", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [43752, "SRR6047142", "SRX3194195", "SRS2520596", "SRP117794", "PRJNA407650", "Danio rerio Transcriptome or Gene expression", "PRJNA407650", "Transcriptome Analysis", "We performed RNA sequencing on four groups of zebrafish larvae: control  TgMyc  TgKras  TgMyc&TgKras to analyze the expression of genes involved in the lipid associated pathways.The results revealed high dynamic alterations in almost all aspects of lipid metabolism  among which  the expressions of genes involved in TG/DG/GP transformation and FA desaturation/elongation displayed intensive changes  in consistent with our observations in lipodomics profiling", null, null, null, null, "Kras&Myc", null, "strain:Tgfabp10a:TetON; TRE:Myc&Tgfabp10a:TetON; TRE:eGFP krasv12|breed:breed with AB|cultivar:not applicable|ecotype:not applicable|age:6dpf|dev stage:larval|sex:not determined|tissue:whole larvae|treatment:E3 with Doxcyclin43ug/ml|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of zebrafish larvaeKras&Myc at 6dpf", "Kras&Myc", "Kras&Myc", "In our project  we sequence 4 samples use Illumina Hiseq platform  and on average we generated about 6.56Gb bases from each sample. We also map clean reads to reference genome  on average 71.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP117794", null, null, "FCHCKWTBBXX-WHZEBleaEAAARAAPEI-18_L1_1.fq.gz FCHCKWTBBXX-WHZEBleaEAAARAAPEI-18_L1_2.fq.gz", "fastq fastq", 6464892900.0, 21549643.0, "FCHCKWTBBXX WHZEBleaEAAARAAPEI 18 L1 2.fq.gz", "0:150 1:150", "A:1676039250;C:1565410813;G:1564742343;T:1658019117;N:681377", 150, 150, null, null, 1676039250, 1565410813, 1564742343, 1658019117, 681377, "SRX3194195", "SRS2520596", "SRA608833", "Fudan University|Department of Biochemistry and Molecular Biology,", "Fudan University", 2, 0.8919, 0.88916, 0.05486, 0.05403, 0.67882, 0.68505, 0.49625, 0.49784, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2017-09-17", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [49393, "SRR7896793", "SRX4734232", "SRS3816349", "SRP162489", "PRJNA492836", "Danio rerio Transcriptome or Gene expression", "PRJNA492836", "Transcriptome Analysis", "to study the feasibility of gene therapy of TNNT2 mutant related cardiomyopathy", null, null, null, null, "homozygous mutant", null, "strain:tnnt2a / |cultivar:not applicable|ecotype:not applicable|age:3 dpf stage:larval|sex:pooled male and female|tissue:whole larvae|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of tnnt2a homozygous mutant zebrafish post Dox induction", "homozygous mutant", "homozygous mutant", "In our project  we sequence 4 samples use Illumina Hiseq platform  and on average we generated about 6.56Gb bases from each sample. We also map clean reads to reference genome  on average 71.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP162489", null, null, "mutant_L1_1.fq.gz mutant_L1_2.fq.gz", "fastq fastq", 6615980100.0, 22053267.0, "mutant L1 2.fq.gz", "0:150 1:150", "A:1714364351;C:1596934293;G:1606676062;T:1697294755;N:710639", 150, 150, null, null, 1714364351, 1596934293, 1606676062, 1697294755, 710639, "SRX4734232", "SRS3816349", null, null, "Children's hospital of Fudan University", 2, 0.88229, 0.88599, 0.05373, 0.05345, 0.67042, 0.67259, 0.45764, 0.46314, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2018-09-24", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [49394, "SRR7896794", "SRX4734231", "SRS3816348", "SRP162489", "PRJNA492836", "Danio rerio Transcriptome or Gene expression", "PRJNA492836", "Transcriptome Analysis", "to study the feasibility of gene therapy of TNNT2 mutant related cardiomyopathy", null, null, null, null, "non homozygous mutant", null, "strain:tnnt2a+/ |cultivar:not applicable|ecotype:not applicable|age:3 dpf stage:larval|sex:pooled male and female|tissue:whole larvae|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of non tnnt2a homozygous mutant zebrafish post Dox induction", "non homozygous mutant", "non homozygous mutant", "In our project  we sequence 4 samples use Illumina Hiseq platform  and on average we generated about 6.56Gb bases from each sample. We also map clean reads to reference genome  on average 71.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP162489", null, null, "non mutant_L1_1.fq.gz non mutant_L1_2.fq.gz", "fastq fastq", 6561723600.0, 21872412.0, "non mutant L1 2.fq.gz", "0:150 1:150", "A:1689788269;C:1592764528;G:1601424044;T:1677002898;N:743861", 150, 150, null, null, 1689788269, 1592764528, 1601424044, 1677002898, 743861, "SRX4734231", "SRS3816348", null, null, "Children's hospital of Fudan University", 2, 0.8991, 0.90343, 0.05565, 0.05598, 0.66752, 0.66929, 0.4567, 0.46188, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2018-09-24", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [49395, "SRR7896795", "SRX4734230", "SRS3816347", "SRP162489", "PRJNA492836", "Danio rerio Transcriptome or Gene expression", "PRJNA492836", "Transcriptome Analysis", "to study the feasibility of gene therapy of TNNT2 mutant related cardiomyopathy", null, null, null, null, "transgene homozygous mutant", null, "strain:Tgcmlc2:TetON; tnnt2a p2A mKate2&tnnt2a / |cultivar:not applicable|ecotype:not applicable|age:3 dpf stage:larval|sex:pooled male and female|tissue:whole larvae|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of transgene tnnt2a homozygous mutant zebrafish post Dox induction", "transgene homozygous mutant", "transgene homozygous mutant", "In our project  we sequence 4 samples use Illumina Hiseq platform  and on average we generated about 6.56Gb bases from each sample. We also map clean reads to reference genome  on average 71.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP162489", null, null, "transgene mutant_L1_1.fq.gz transgene mutant_L1_2.fq.gz", "fastq fastq", 6496976700.0, 21656589.0, "transgene mutant L1 2.fq.gz", null, null, null, null, null, null, null, null, null, null, null, "SRX4734230", "SRS3816347", null, null, "Children's hospital of Fudan University", 2, 0.9041, 0.8968, 0.06697, 0.06595, 0.66789, 0.66787, 0.45258, 0.45688, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2018-09-24", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [49396, "SRR7896796", "SRX4734229", "SRS3816346", "SRP162489", "PRJNA492836", "Danio rerio Transcriptome or Gene expression", "PRJNA492836", "Transcriptome Analysis", "to study the feasibility of gene therapy of TNNT2 mutant related cardiomyopathy", null, null, null, null, "non transgene homozyous mutant", null, "strain:Tgcmlc2:TetON; tnnt2a p2A mKate2&tnnt2a+/ |cultivar:not applicable|ecotype:not applicable|age:3 dpf stage:larval|sex:pooled male and female|tissue:whole larvae|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of non transgene tnnt2a homozygous mutant zebrafish post Dox induction", "non transgene homozyous mutant", "non transgene homozyous mutant", "In our project  we sequence 4 samples use Illumina Hiseq platform  and on average we generated about 6.56Gb bases from each sample. We also map clean reads to reference genome  on average 71.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP162489", null, null, "transgene non mutant_L1_1.fq.gz transgene non mutant_L1_2.fq.gz", "fastq fastq", 6541491300.0, 21804971.0, "transgene non mutant L1 1.fq.gz", "0:150 1:150", "A:1689774214;C:1582775230;G:1591564227;T:1676650852;N:726777", 150, 150, null, null, 1689774214, 1582775230, 1591564227, 1676650852, 726777, "SRX4734229", "SRS3816346", null, null, "Children's hospital of Fudan University", 2, 0.89333, 0.89894, 0.05656, 0.05595, 0.66665, 0.66888, 0.46433, 0.46204, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2018-09-24", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [58554, "SRR11362969", "SRX7964365", "SRS6350268", "SRP253564", "PRJNA613729", "Danio rerio Transcriptome or Gene expression", "PRJNA613729", "Transcriptome Analysis", "Transcriptome of serpini1 deficient zebrafish by CRISPR/Cas9 technique and an inducible neuroserpin overexpression model under the Huc promoter in the zebrafish", null, null, null, "Model organism or animal sample from Danio rerio", "Tgserpini1", null, "strain:Tg huc: teton: gal4; tre: serpini1: mkate2|age:7dpf|dev stage:larval|sex:pooled male and female|tissue:whole larvae|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of zebrafish larvaeTgserpini1 at 7dpf", "Tgserpini1", "Tgserpini1", "In our project  we sequence 3 samples use Illumina Hiseq platform  and on average we generated about 6.68Gb bases from each sample. We also map clean reads to reference genome  on average 79.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP253564", null, null, "FCHGNGYCCXY_L3_WHZEBozrEAACRAAPEI-17_1.fq.gz FCHGNGYCCXY_L3_WHZEBozrEAACRAAPEI-17_2.fq.gz", "fastq fastq", 6640137000.0, 22133790.0, "FCHGNGYCCXY L3 WHZEBozrEAACRAAPEI 17 1.fq.gz", "0:150 1:150", "A:1729320460;C:1602342446;G:1594872338;T:1713455542;N:146214", 150, 150, null, null, 1729320460, 1602342446, 1594872338, 1713455542, 146214, "SRX7964365", "SRS6350268", "SRA1057721", "Huashan Hospital, Fudan University|Department of Neurology", "Huashan Hospital, Fudan University", 2, 0.90809, 0.90905, 0.05765, 0.05783, 0.67026, 0.67399, 0.46996, 0.47114, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2020-03-21", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [58555, "SRR11362970", "SRX7964364", "SRS6350267", "SRP253564", "PRJNA613729", "Danio rerio Transcriptome or Gene expression", "PRJNA613729", "Transcriptome Analysis", "Transcriptome of serpini1 deficient zebrafish by CRISPR/Cas9 technique and an inducible neuroserpin overexpression model under the Huc promoter in the zebrafish", null, null, null, "Model organism or animal sample from Danio rerio", "serpini1 / ", null, "strain:Tgserpini1 / |age:7dpf|dev stage:larval|sex:pooled male and female|tissue:whole larvae|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of zebrafish larvaeserpini1 /  at 7dpf", "serpini1 / ", "serpini1 / ", "In our project  we sequence 3 samples use Illumina Hiseq platform  and on average we generated about 6.68Gb bases from each sample. We also map clean reads to reference genome  on average 79.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP253564", null, null, "FCHGNGYCCXY_L3_WHZEBozrEAABRAAPEI-16_2.fq.gz FCHGNGYCCXY_L3_WHZEBozrEAABRAAPEI-16_1.fq.gz", "fastq fastq", 6617653200.0, 22058844.0, "FCHGNGYCCXY L3 WHZEBozrEAABRAAPEI 16 1.fq.gz", "0:150 1:150", "A:1716574905;C:1602024658;G:1595975688;T:1702935179;N:142770", 150, 150, null, null, 1716574905, 1602024658, 1595975688, 1702935179, 142770, "SRX7964364", "SRS6350267", "SRA1057721", "Huashan Hospital, Fudan University|Department of Neurology", "Huashan Hospital, Fudan University", 2, 0.90372, 0.90544, 0.06479, 0.06578, 0.67696, 0.68045, 0.45687, 0.46187, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2020-03-21", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [58556, "SRR11362971", "SRX7964363", "SRS6350266", "SRP253564", "PRJNA613729", "Danio rerio Transcriptome or Gene expression", "PRJNA613729", "Transcriptome Analysis", "Transcriptome of serpini1 deficient zebrafish by CRISPR/Cas9 technique and an inducible neuroserpin overexpression model under the Huc promoter in the zebrafish", null, null, null, "Model organism or animal sample from Danio rerio", "control", null, "strain:AB|age:7dpf|dev stage:larval|sex:pooled male and female|tissue:whole larvae|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of zebrafish larvaecontrol at 7dpf", "control", "control", "In our project  we sequence 3 samples use Illumina Hiseq platform  and on average we generated about 6.68Gb bases from each sample. We also map clean reads to reference genome  on average 79.49% reads are mapped", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "ILLUMINA", "Illumina HiSeq 2500", null, "SRP253564", null, null, "FCHGNGYCCXY_L3_WHZEBozrEAAARAAPEI-168_1.fq.gz FCHGNGYCCXY_L3_WHZEBozrEAAARAAPEI-168_2.fq.gz", "fastq fastq", 6741448200.0, 22471494.0, "FCHGNGYCCXY L3 WHZEBozrEAAARAAPEI 168 1.fq.gz", "0:150 1:150", "A:1758797585;C:1622874542;G:1617573676;T:1742064320;N:138077", 150, 150, null, null, 1758797585, 1622874542, 1617573676, 1742064320, 138077, "SRX7964363", "SRS6350266", "SRA1057721", "Huashan Hospital, Fudan University|Department of Neurology", "Huashan Hospital, Fudan University", 2, 0.89722, 0.89787, 0.06821, 0.06852, 0.67675, 0.68256, 0.45822, 0.46023, 150, 150, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2020-03-21", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [72445, "SRR22540104", "SRX18504097", "SRS15974727", "SRP411489", "PRJNA908883", "Zebrafish PFHxS exposure RNA seq", "PRJNA908883", "Other", "RAN seq of zebrafish embryos post 5 days PFHxS exposure", null, null, null, "Model organism or animal sample from Danio rerio", "Treatment 3", null, "strain:AB|dev stage:5dpf|sex:not applicable|tissue:whole embryo|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of zebrafish embryo", "T3/", "T3/", "effect of pfhxs", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "BGISEQ", "BGISEQ-500", null, "SRP411489", null, null, "T3.AddRG.Reorder.Sort.bam", "bam", 4395695600.0, 21978478.0, "T3.AddRG.Reorder.Sort.bam", "0:100 1:100", "A:1142519361;C:1049796532;G:1054171464;T:1149208243;N:0", 100, 100, null, null, 1142519361, 1049796532, 1054171464, 1149208243, 0, "SRX18504097", "SRS15974727", "SRA1553988", "Dr. William TSE/ Kyushu University|Faculty of Agriculture", "Dr. William TSE/ Kyushu University", 2, 0.95843, 0.96189, 0.05928, 0.05837, 0.66996, 0.67022, 0.48134, 0.48129, 100, 100, "B", "B", "biological fallback assumption", "bgi", "bgi", "unknown", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "Japan", "2022-12-05", "Larval", "Larval", "Whole Organism", "All anatomical structures"], [72446, "SRR22540105", "SRX18504096", "SRS15974726", "SRP411489", "PRJNA908883", "Zebrafish PFHxS exposure RNA seq", "PRJNA908883", "Other", "RAN seq of zebrafish embryos post 5 days PFHxS exposure", null, null, null, "Model organism or animal sample from Danio rerio", "Treatment 2", null, "strain:AB|dev stage:5dpf|sex:not applicable|tissue:whole embryo|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "RNA seq of zebrafish embryo", "T2/", "T2/", "effect of pfhxs", null, null, "RNA-Seq", "TRANSCRIPTOMIC", "RANDOM", "SINGLE", "BGISEQ", "BGISEQ-500", null, "SRP411489", null, null, "T2.AddRG.Reorder.Sort.bam", "bam", 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